RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 MROH1Q8NDA8 1641 aa4.57□□□□□ -1.68
SNX13-209ENST00000492626 HSPA1LP34931 641 aa4.56□□□□□ -1.68
SNX13-209ENST00000492626 MLH3Q9UHC1 1453 aa4.56□□□□□ -1.68
SNX13-209ENST00000492626 SIGLEC1Q9BZZ2 1709 aa4.56□□□□□ -1.68
SNX13-209ENST00000492626 VARSP26640 1264 aaKnown RBP4.56□□□□□ -1.68
SNX13-209ENST00000492626 NAA30Q147X3 362 aaPredicted RBP4.56□□□□□ -1.68
SNX13-209ENST00000492626 SF3A1Q15459 793 aaKnown RBP4.56□□□□□ -1.68
SNX13-209ENST00000492626 TSGA10IPQ3SY00 556 aa4.56□□□□□ -1.68
SNX13-209ENST00000492626 ABTB2Q8N961 1025 aa4.56□□□□□ -1.68
SNX13-209ENST00000492626 HELQQ8TDG4 1101 aa4.56□□□□□ -1.68
SNX13-209ENST00000492626 PLEKHH2Q8IVE3 1493 aa4.56□□□□□ -1.68
SNX13-209ENST00000492626 ZC3H13Q5T200 1668 aaKnown RBP4.56□□□□□ -1.68
SNX13-209ENST00000492626 NPAS4Q8IUM7 802 aa4.56□□□□□ -1.68
SNX13-209ENST00000492626 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.56□□□□□ -1.68
SNX13-209ENST00000492626 PCDHGA11Q9Y5H2 935 aa4.56□□□□□ -1.68
SNX13-209ENST00000492626 PHLPP1O60346 1717 aa4.56□□□□□ -1.68
SNX13-209ENST00000492626 RGPD3A6NKT7 1758 aaPredicted RBP4.56□□□□□ -1.68
SNX13-209ENST00000492626 RGPD4Q7Z3J3 1758 aa4.56□□□□□ -1.68
SNX13-209ENST00000492626 UNCXA6NJT0 531 aa4.55□□□□□ -1.68
SNX13-209ENST00000492626 PTCRAQ6ISU1 281 aaPredicted RBP4.55□□□□□ -1.68
SNX13-209ENST00000492626 RGL4Q8IZJ4 473 aa4.55□□□□□ -1.68
SNX13-209ENST00000492626 NBPF15Q8N660 670 aa4.55□□□□□ -1.68
SNX13-209ENST00000492626 JCADQ9P266 1359 aa4.55□□□□□ -1.68
SNX13-209ENST00000492626 NINLQ9Y2I6 1382 aa4.55□□□□□ -1.68
SNX13-209ENST00000492626 NLRP1Q9C000 1473 aa4.55□□□□□ -1.68
SNX13-209ENST00000492626 RGPD1P0DJD0 1748 aa4.55□□□□□ -1.68
SNX13-209ENST00000492626 S1PR4O95977 384 aa4.55□□□□□ -1.68
SNX13-209ENST00000492626 MAPK8P45983 427 aa4.55□□□□□ -1.68
SNX13-209ENST00000492626 SH3RF1Q7Z6J0 888 aa4.55□□□□□ -1.68
SNX13-209ENST00000492626 DNMT3AQ9Y6K1 912 aaPredicted RBP4.55□□□□□ -1.68
SNX13-209ENST00000492626 DNMT1P26358 1616 aaKnown RBP4.55□□□□□ -1.68
SNX13-209ENST00000492626 DIP2CQ9Y2E4 1556 aa4.55□□□□□ -1.68
SNX13-209ENST00000492626 OCLNQ16625 522 aa4.55□□□□□ -1.68
SNX13-209ENST00000492626 C16orf46Q6P387 395 aa4.55□□□□□ -1.68
SNX13-209ENST00000492626 TRMT44Q8IYL2 757 aaKnown RBP4.55□□□□□ -1.68
SNX13-209ENST00000492626 OTUD5Q96G74 571 aa4.55□□□□□ -1.68
SNX13-209ENST00000492626 PGPEP1Q9NXJ5 209 aa4.55□□□□□ -1.68
SNX13-209ENST00000492626 SERTAD1Q9UHV2 236 aa4.55□□□□□ -1.68
SNX13-209ENST00000492626 SCNN1AP37088 669 aa4.55□□□□□ -1.68
SNX13-209ENST00000492626 ZC3H6P61129 1189 aaKnown RBP4.55□□□□□ -1.68
SNX13-209ENST00000492626 NOM1Q5C9Z4 860 aaKnown RBP4.55□□□□□ -1.68
SNX13-209ENST00000492626 DRC1Q96MC2 740 aa4.55□□□□□ -1.68
SNX13-209ENST00000492626 CITED4Q96RK1 184 aa4.55□□□□□ -1.68
SNX13-209ENST00000492626 ZNF358Q9NW07 568 aa4.55□□□□□ -1.68
SNX13-209ENST00000492626 NKTRP30414 1462 aaKnown RBP4.54□□□□□ -1.68
SNX13-209ENST00000492626 SAMD9Q5K651 1589 aa4.54□□□□□ -1.68
SNX13-209ENST00000492626 COL16A1Q07092 1604 aaPredicted RBP4.54□□□□□ -1.68
SNX13-209ENST00000492626 GDF10P55107 478 aa4.54□□□□□ -1.68
SNX13-209ENST00000492626 PLCB3Q01970 1234 aa4.54□□□□□ -1.68
SNX13-209ENST00000492626 FKBP5Q13451 457 aaPredicted RBP4.54□□□□□ -1.68
SNX13-209ENST00000492626 SREK1Q8WXA9 508 aaKnown RBP4.54□□□□□ -1.68
SNX13-209ENST00000492626 COL26A1Q96A83 441 aa4.54□□□□□ -1.68
SNX13-209ENST00000492626 OCSTAMPQ9BR26 566 aa4.54□□□□□ -1.68
SNX13-209ENST00000492626 CYLDQ9NQC7 956 aa4.54□□□□□ -1.68
SNX13-209ENST00000492626 ESPNB1AK53 854 aa4.54□□□□□ -1.68
SNX13-209ENST00000492626 ERCC5P28715 1186 aaPredicted RBP4.54□□□□□ -1.68
SNX13-209ENST00000492626 WEE1P30291 646 aa4.54□□□□□ -1.68
SNX13-209ENST00000492626 MYT1Q01538 1121 aa4.54□□□□□ -1.68
SNX13-209ENST00000492626 MTMR3Q13615 1198 aa4.54□□□□□ -1.68
SNX13-209ENST00000492626 GNL2Q13823 731 aaKnown RBP4.54□□□□□ -1.68
SNX13-209ENST00000492626 INTS6LQ5JSJ4 861 aaKnown RBP4.54□□□□□ -1.68
SNX13-209ENST00000492626 FAM9AQ8IZU1 332 aaPredicted RBP4.54□□□□□ -1.68
SNX13-209ENST00000492626 SLAIN2Q9P270 581 aa4.54□□□□□ -1.68
SNX13-209ENST00000492626 RGS17Q9UGC6 210 aaPredicted RBP4.54□□□□□ -1.68
SNX13-209ENST00000492626 CHD4Q14839 1912 aa4.54□□□□□ -1.68
SNX13-209ENST00000492626 CD2BP2O95400 341 aaKnown RBP4.54□□□□□ -1.68
SNX13-209ENST00000492626 NEFLP07196 543 aa4.54□□□□□ -1.68
SNX13-209ENST00000492626 LHX8Q68G74 356 aa4.54□□□□□ -1.68
SNX13-209ENST00000492626 DMRTB1Q96MA1 342 aa4.54□□□□□ -1.68
SNX13-209ENST00000492626 C1QTNF2Q9BXJ5 285 aa4.54□□□□□ -1.68
SNX13-209ENST00000492626 ZNF518AQ6AHZ1 1483 aa4.53□□□□□ -1.68
SNX13-209ENST00000492626 WNT7BP56706 349 aa4.53□□□□□ -1.68
SNX13-209ENST00000492626 PSMD2Q13200 908 aa4.53□□□□□ -1.68
SNX13-209ENST00000492626 KIAA1522Q9P206 1035 aaPredicted RBP4.53□□□□□ -1.68
SNX13-209ENST00000492626 VTI1BQ9UEU0 232 aa4.53□□□□□ -1.68
SNX13-209ENST00000492626 ZNF232Q9UNY5 417 aa4.53□□□□□ -1.68
SNX13-209ENST00000492626 MYO5CQ9NQX4 1742 aa4.53□□□□□ -1.68
SNX13-209ENST00000492626 HSP90B1P14625 803 aaKnown RBP4.53□□□□□ -1.68
SNX13-209ENST00000492626 PSMA6P60900 246 aaKnown RBP4.53□□□□□ -1.68
SNX13-209ENST00000492626 FAM13BQ9NYF5 915 aa4.53□□□□□ -1.68
SNX13-209ENST00000492626 MAP4K5Q9Y4K4 846 aa4.53□□□□□ -1.68
SNX13-209ENST00000492626 ERVH48-1M5A8F1 160 aa4.53□□□□□ -1.68
SNX13-209ENST00000492626 VAMP1P23763 118 aa4.53□□□□□ -1.68
SNX13-209ENST00000492626 FSHRP23945 695 aa4.53□□□□□ -1.68
SNX13-209ENST00000492626 USP5P45974 858 aa4.53□□□□□ -1.68
SNX13-209ENST00000492626 SH3BP2P78314 561 aa4.53□□□□□ -1.68
SNX13-209ENST00000492626 TRIM32Q13049 653 aa4.53□□□□□ -1.68
SNX13-209ENST00000492626 TNS4Q8IZW8 715 aa4.53□□□□□ -1.68
SNX13-209ENST00000492626 LDHBP07195 334 aaKnown RBP4.52□□□□□ -1.69
SNX13-209ENST00000492626 MPSTP25325 297 aa4.52□□□□□ -1.69
SNX13-209ENST00000492626 ZNF516Q92618 1163 aa4.52□□□□□ -1.69
SNX13-209ENST00000492626 RBCK1Q9BYM8 510 aa4.52□□□□□ -1.69
SNX13-209ENST00000492626 DIP2AQ14689 1571 aa4.52□□□□□ -1.69
SNX13-209ENST00000492626 SCAMP3O14828 347 aaKnown RBP4.52□□□□□ -1.69
SNX13-209ENST00000492626 ADGBQ8N7X0 1667 aa4.52□□□□□ -1.69
SNX13-209ENST00000492626 BRD2P25440 801 aaKnown RBP4.52□□□□□ -1.69
SNX13-209ENST00000492626 STIM2Q9P246 746 aa4.52□□□□□ -1.69
SNX13-209ENST00000492626 PTPN23Q9H3S7 1636 aa4.51□□□□□ -1.69
SNX13-209ENST00000492626 CCDC116Q8IYX3 515 aa4.51□□□□□ -1.69
SNX13-209ENST00000492626 TMEM87AQ8NBN3 555 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms