RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	BCL2L12	Q9HB09	334 aa		7.65	□□□□□ -1.18
SEC13-219	ENST00000492602	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	7.65	□□□□□ -1.18
SEC13-219	ENST00000492602	NRXN2	Q9P2S2	1712 aa		7.65	□□□□□ -1.18
SEC13-219	ENST00000492602	HDAC9	Q9UKV0	1011 aa		7.65	□□□□□ -1.18
SEC13-219	ENST00000492602	TRPM7	Q96QT4	1865 aa		7.64	□□□□□ -1.19
SEC13-219	ENST00000492602	SOS1	Q07889	1333 aa	Predicted RBP	7.64	□□□□□ -1.19
SEC13-219	ENST00000492602	ERVV-2	B6SEH9	535 aa		7.64	□□□□□ -1.19
SEC13-219	ENST00000492602	SCNN1D	P51172	638 aa		7.64	□□□□□ -1.19
SEC13-219	ENST00000492602	HUNK	P57058	714 aa		7.64	□□□□□ -1.19
SEC13-219	ENST00000492602	CABP4	P57796	275 aa		7.64	□□□□□ -1.19
SEC13-219	ENST00000492602	KIF23	Q02241	960 aa	Predicted RBP	7.64	□□□□□ -1.19
SEC13-219	ENST00000492602	GLIS2	Q9BZE0	524 aa	Predicted RBP	7.64	□□□□□ -1.19
SEC13-219	ENST00000492602	IARS	P41252	1262 aa	Known RBP	7.63	□□□□□ -1.19
SEC13-219	ENST00000492602	EIF6	P56537	245 aa	Known RBP	7.63	□□□□□ -1.19
SEC13-219	ENST00000492602	STYK1	Q6J9G0	422 aa		7.63	□□□□□ -1.19
SEC13-219	ENST00000492602	PRR5L	Q6MZQ0	368 aa		7.63	□□□□□ -1.19
SEC13-219	ENST00000492602	JDP2	Q8WYK2	163 aa		7.63	□□□□□ -1.19
SEC13-219	ENST00000492602	MASTL	Q96GX5	879 aa		7.63	□□□□□ -1.19
SEC13-219	ENST00000492602	FLT4	P35916	1363 aa		7.62	□□□□□ -1.19
SEC13-219	ENST00000492602	SLX4	Q8IY92	1834 aa		7.62	□□□□□ -1.19
SEC13-219	ENST00000492602	NPHP1	O15259	732 aa		7.62	□□□□□ -1.19
SEC13-219	ENST00000492602	SRGN	P10124	158 aa		7.62	□□□□□ -1.19
SEC13-219	ENST00000492602	RGMB	Q6NW40	437 aa		7.62	□□□□□ -1.19
SEC13-219	ENST00000492602	OLFM4	Q6UX06	510 aa		7.62	□□□□□ -1.19
SEC13-219	ENST00000492602	C7orf43	Q8WVR3	580 aa		7.62	□□□□□ -1.19
SEC13-219	ENST00000492602	TRIOBP	Q9H2D6	2365 aa		7.62	□□□□□ -1.19
SEC13-219	ENST00000492602	COL15A1	P39059	1388 aa		7.61	□□□□□ -1.19
SEC13-219	ENST00000492602	POTEF	A5A3E0	1075 aa		7.61	□□□□□ -1.19
SEC13-219	ENST00000492602	FAM155A	B1AL88	458 aa	Predicted RBP	7.61	□□□□□ -1.19
SEC13-219	ENST00000492602	TBC1D9B	Q66K14	1250 aa		7.61	□□□□□ -1.19
SEC13-219	ENST00000492602	FBXO46	Q6PJ61	603 aa	Predicted RBP	7.61	□□□□□ -1.19
SEC13-219	ENST00000492602	DNAJC10	Q8IXB1	793 aa		7.61	□□□□□ -1.19
SEC13-219	ENST00000492602	RTKN2	Q8IZC4	609 aa		7.61	□□□□□ -1.19
SEC13-219	ENST00000492602	PIAS4	Q8N2W9	510 aa	Predicted RBP	7.61	□□□□□ -1.19
SEC13-219	ENST00000492602	CSRNP1	Q96S65	589 aa		7.61	□□□□□ -1.19
SEC13-219	ENST00000492602	GGNBP2	Q9H3C7	697 aa		7.61	□□□□□ -1.19
SEC13-219	ENST00000492602	COL11A2	P13942	1736 aa	Predicted RBP	7.61	□□□□□ -1.19
SEC13-219	ENST00000492602	TONSL	Q96HA7	1378 aa		7.6	□□□□□ -1.19
SEC13-219	ENST00000492602	COL6A3	P12111	3177 aa		7.6	□□□□□ -1.19
SEC13-219	ENST00000492602	HSP90AB1	P08238	724 aa	Known RBP	7.6	□□□□□ -1.19
SEC13-219	ENST00000492602	ZNF157	P51786	506 aa	Predicted RBP	7.6	□□□□□ -1.19
SEC13-219	ENST00000492602	ZNF296	Q8WUU4	475 aa	Predicted RBP	7.6	□□□□□ -1.19
SEC13-219	ENST00000492602	CCDC102A	Q96A19	550 aa		7.6	□□□□□ -1.19
SEC13-219	ENST00000492602	ADARB2	Q9NS39	739 aa	Known RBP	7.6	□□□□□ -1.19
SEC13-219	ENST00000492602	ZBTB1	Q9Y2K1	713 aa		7.6	□□□□□ -1.19
SEC13-219	ENST00000492602	ANKRD31	Q8N7Z5	1873 aa		7.6	□□□□□ -1.19
SEC13-219	ENST00000492602	ST5	P78524	1137 aa		7.59	□□□□□ -1.19
SEC13-219	ENST00000492602	CHRDL2	Q6WN34	429 aa		7.59	□□□□□ -1.19
SEC13-219	ENST00000492602	CDC37L1	Q7L3B6	337 aa		7.59	□□□□□ -1.19
SEC13-219	ENST00000492602	CNBD1	Q8NA66	436 aa		7.59	□□□□□ -1.19
SEC13-219	ENST00000492602	NFATC2IP	Q8NCF5	419 aa		7.59	□□□□□ -1.19
SEC13-219	ENST00000492602	OTUD5	Q96G74	571 aa		7.59	□□□□□ -1.19
SEC13-219	ENST00000492602	EYA1	Q99502	592 aa		7.59	□□□□□ -1.19
SEC13-219	ENST00000492602	CACNA1S	Q13698	1873 aa		7.59	□□□□□ -1.19
SEC13-219	ENST00000492602	RAB3GAP2	Q9H2M9	1393 aa		7.59	□□□□□ -1.2
SEC13-219	ENST00000492602	PPM1G	O15355	546 aa	Predicted RBP	7.58	□□□□□ -1.2
SEC13-219	ENST00000492602	TBC1D8	O95759	1140 aa		7.58	□□□□□ -1.2
SEC13-219	ENST00000492602	CYP19A1	P11511	503 aa	Predicted RBP	7.58	□□□□□ -1.2
SEC13-219	ENST00000492602	CANX	P27824	592 aa	Known RBP	7.58	□□□□□ -1.2
SEC13-219	ENST00000492602	COL25A1	Q9BXS0	654 aa	Predicted RBP	7.58	□□□□□ -1.2
SEC13-219	ENST00000492602	EMILIN1	Q9Y6C2	1016 aa		7.58	□□□□□ -1.2
SEC13-219	ENST00000492602	NCAPD2	Q15021	1401 aa		7.58	□□□□□ -1.2
SEC13-219	ENST00000492602	ROCK2	O75116	1388 aa	Known RBP	7.58	□□□□□ -1.2
SEC13-219	ENST00000492602	KIF24	Q5T7B8	1368 aa		7.58	□□□□□ -1.2
SEC13-219	ENST00000492602	SCN11A	Q9UI33	1791 aa		7.57	□□□□□ -1.2
SEC13-219	ENST00000492602	ST20-MTHFS	A0A0A6YYL1	179 aa		7.57	□□□□□ -1.2
SEC13-219	ENST00000492602		H0YGN5	161 aa		7.57	□□□□□ -1.2
SEC13-219	ENST00000492602	FYB1	O15117	783 aa		7.57	□□□□□ -1.2
SEC13-219	ENST00000492602	EN2	P19622	333 aa	Predicted RBP	7.57	□□□□□ -1.2
SEC13-219	ENST00000492602	MTHFS	P49914	203 aa		7.57	□□□□□ -1.2
SEC13-219	ENST00000492602	INTS3	Q68E01	1043 aa	Known RBP	7.57	□□□□□ -1.2
SEC13-219	ENST00000492602	DLK2	Q6UY11	383 aa		7.57	□□□□□ -1.2
SEC13-219	ENST00000492602	USP48	Q86UV5	1035 aa		7.57	□□□□□ -1.2
SEC13-219	ENST00000492602	C2orf69	Q8N8R5	385 aa		7.57	□□□□□ -1.2
SEC13-219	ENST00000492602	GBA2	Q9HCG7	927 aa	Predicted RBP	7.57	□□□□□ -1.2
SEC13-219	ENST00000492602	GPRC5D	Q9NZD1	345 aa		7.57	□□□□□ -1.2
SEC13-219	ENST00000492602	RBM27	Q9P2N5	1060 aa	Known RBP	7.57	□□□□□ -1.2
SEC13-219	ENST00000492602	PGAP2	Q9UHJ9	254 aa		7.57	□□□□□ -1.2
SEC13-219	ENST00000492602	TJP1	Q07157	1748 aa		7.57	□□□□□ -1.2
SEC13-219	ENST00000492602	AKAP11	Q9UKA4	1901 aa		7.56	□□□□□ -1.2
SEC13-219	ENST00000492602	SLC10A3	P09131	477 aa		7.56	□□□□□ -1.2
SEC13-219	ENST00000492602	NPR1	P16066	1061 aa		7.56	□□□□□ -1.2
SEC13-219	ENST00000492602	REM2	Q8IYK8	340 aa	Predicted RBP	7.56	□□□□□ -1.2
SEC13-219	ENST00000492602	LARGE2	Q8N3Y3	721 aa		7.56	□□□□□ -1.2
SEC13-219	ENST00000492602	MPND	Q8N594	471 aa		7.56	□□□□□ -1.2
SEC13-219	ENST00000492602	ZC3H15	Q8WU90	426 aa	Known RBP	7.56	□□□□□ -1.2
SEC13-219	ENST00000492602	SETDB2	Q96T68	719 aa		7.56	□□□□□ -1.2
SEC13-219	ENST00000492602		A0A087WZG4	1122 aa		7.55	□□□□□ -1.2
SEC13-219	ENST00000492602	GPR25	O00155	361 aa		7.55	□□□□□ -1.2
SEC13-219	ENST00000492602	HIRA	P54198	1017 aa	Predicted RBP	7.55	□□□□□ -1.2
SEC13-219	ENST00000492602	ZNF530	Q6P9A1	599 aa	Predicted RBP	7.55	□□□□□ -1.2
SEC13-219	ENST00000492602	PSMD1	Q99460	953 aa		7.55	□□□□□ -1.2
SEC13-219	ENST00000492602	TBC1D2B	Q9UPU7	963 aa		7.55	□□□□□ -1.2
SEC13-219	ENST00000492602	ZNF330	Q9Y3S2	320 aa	Predicted RBP	7.55	□□□□□ -1.2
SEC13-219	ENST00000492602	BRCA2	P51587	3418 aa		7.55	□□□□□ -1.2
SEC13-219	ENST00000492602	COL4A5	P29400	1685 aa		7.54	□□□□□ -1.2
SEC13-219	ENST00000492602	BCOR	Q6W2J9	1755 aa		7.54	□□□□□ -1.2
SEC13-219	ENST00000492602	ARFGEF2	Q9Y6D5	1785 aa		7.54	□□□□□ -1.2
SEC13-219	ENST00000492602	EIF5	P55010	431 aa	Known RBP	7.54	□□□□□ -1.2
SEC13-219	ENST00000492602	PLEKHO1	Q53GL0	409 aa	Predicted RBP	7.54	□□□□□ -1.2

Retrieved 100 of 20,778 RNA–protein pairs in 17 ms