RNA–Protein interactions for RNA: ENST00000490953.5

SBDS-204, Transcript of SBDS, ribosome maturation factor, humanhuman

TSL 1 (best)

Gene SBDS, Length 841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-204ENST00000490953 SBF1O95248 1867 aa23.98■■□□□ 1.43
SBDS-204ENST00000490953 C9orf131Q5VYM1 1079 aa23.98■■□□□ 1.43
SBDS-204ENST00000490953 NGEFQ8N5V2 710 aa23.98■■□□□ 1.43
SBDS-204ENST00000490953 PDZRN3Q9UPQ7 1066 aa23.98■■□□□ 1.43
SBDS-204ENST00000490953 CACNA1SQ13698 1873 aa23.98■■□□□ 1.43
SBDS-204ENST00000490953 NBPF5PQ86XG9 351 aaPredicted RBP23.97■■□□□ 1.43
SBDS-204ENST00000490953 ZNF622Q969S3 477 aaKnown RBP eCLIP23.97■■□□□ 1.43
SBDS-204ENST00000490953 ADAMTS8Q9UP79 889 aa23.97■■□□□ 1.43
SBDS-204ENST00000490953 RGL2O15211 777 aa23.96■■□□□ 1.43
SBDS-204ENST00000490953 NIP7Q9Y221 180 aaKnown RBP eCLIP23.96■■□□□ 1.43
SBDS-204ENST00000490953 NUP98P52948 1817 aa23.96■■□□□ 1.43
SBDS-204ENST00000490953 MYL6BP14649 208 aa23.95■■□□□ 1.42
SBDS-204ENST00000490953 BABAM1Q9NWV8 329 aa23.95■■□□□ 1.42
SBDS-204ENST00000490953 RNF181Q9P0P0 153 aa23.95■■□□□ 1.42
SBDS-204ENST00000490953 SENP3-EIF4A1A0A087X0R7 540 aa23.94■■□□□ 1.42
SBDS-204ENST00000490953 RASSF7Q02833 373 aa23.94■■□□□ 1.42
SBDS-204ENST00000490953 HLFQ16534 295 aa23.94■■□□□ 1.42
SBDS-204ENST00000490953 ARFGEF2Q9Y6D5 1785 aa23.93■■□□□ 1.42
SBDS-204ENST00000490953 ERBB4Q15303 1308 aa23.93■■□□□ 1.42
SBDS-204ENST00000490953 KIF6Q6ZMV9 814 aa23.93■■□□□ 1.42
SBDS-204ENST00000490953 MAP3K15Q6ZN16 1313 aa23.92■■□□□ 1.42
SBDS-204ENST00000490953 TRIM35Q9UPQ4 493 aa23.92■■□□□ 1.42
SBDS-204ENST00000490953 FAM177BA6PVY3 158 aa23.91■■□□□ 1.42
SBDS-204ENST00000490953 TTLL7Q6ZT98 887 aa23.91■■□□□ 1.42
SBDS-204ENST00000490953 LAS1LQ9Y4W2 734 aaKnown RBP23.91■■□□□ 1.42
SBDS-204ENST00000490953 CCDC88AQ3V6T2 1871 aa23.91■■□□□ 1.42
SBDS-204ENST00000490953 ERVV-1B6SEH8 477 aa23.9■■□□□ 1.42
SBDS-204ENST00000490953 EIF2S2P20042 333 aaKnown RBP23.9■■□□□ 1.42
SBDS-204ENST00000490953 TPTE2Q6XPS3 522 aa23.9■■□□□ 1.42
SBDS-204ENST00000490953 TIAM2Q8IVF5 1701 aa23.9■■□□□ 1.42
SBDS-204ENST00000490953 KIF3CO14782 793 aa23.89■■□□□ 1.41
SBDS-204ENST00000490953 SRGNP10124 158 aa23.89■■□□□ 1.41
SBDS-204ENST00000490953 STYK1Q6J9G0 422 aa23.89■■□□□ 1.41
SBDS-204ENST00000490953 ZBTB3Q9H5J0 574 aa23.89■■□□□ 1.41
SBDS-204ENST00000490953 ZNF219Q9P2Y4 722 aaPredicted RBP23.89■■□□□ 1.41
SBDS-204ENST00000490953 SLX4Q8IY92 1834 aa23.89■■□□□ 1.41
SBDS-204ENST00000490953 CNKSR1Q969H4 720 aa23.88■■□□□ 1.41
SBDS-204ENST00000490953 MASTLQ96GX5 879 aa23.88■■□□□ 1.41
SBDS-204ENST00000490953 FER1L6Q2WGJ9 1857 aa23.87■■□□□ 1.41
SBDS-204ENST00000490953 C21orf2O43822 256 aa23.87■■□□□ 1.41
SBDS-204ENST00000490953 LMNB1P20700 586 aa23.87■■□□□ 1.41
SBDS-204ENST00000490953 GTF2E1P29083 439 aaPredicted RBP23.87■■□□□ 1.41
SBDS-204ENST00000490953 TNRC6CQ9HCJ0 1690 aaKnown RBP23.86■■□□□ 1.41
SBDS-204ENST00000490953 NFKBIEO00221 500 aa23.86■■□□□ 1.41
SBDS-204ENST00000490953 CHL1O00533 1208 aa23.86■■□□□ 1.41
SBDS-204ENST00000490953 PRPF40BQ6NWY9 871 aaKnown RBP23.85■■□□□ 1.41
SBDS-204ENST00000490953 NECTIN2Q92692 538 aa23.85■■□□□ 1.41
SBDS-204ENST00000490953 NYXQ9GZU5 481 aa23.85■■□□□ 1.41
SBDS-204ENST00000490953 NMRK2Q9NPI5 230 aa23.85■■□□□ 1.41
SBDS-204ENST00000490953 KDM2BQ8NHM5 1336 aa23.84■■□□□ 1.41
SBDS-204ENST00000490953 ANXA1P04083 346 aa23.84■■□□□ 1.41
SBDS-204ENST00000490953 GPTP24298 496 aa23.84■■□□□ 1.41
SBDS-204ENST00000490953 PRELPP51888 382 aa23.84■■□□□ 1.41
SBDS-204ENST00000490953 PDIA6Q15084 440 aa23.84■■□□□ 1.41
SBDS-204ENST00000490953 ZC3H4Q9UPT8 1303 aaKnown RBP23.84■■□□□ 1.41
SBDS-204ENST00000490953 NPR1P16066 1061 aa23.83■■□□□ 1.41
SBDS-204ENST00000490953 KRT24Q2M2I5 525 aa23.83■■□□□ 1.41
SBDS-204ENST00000490953 PROSER3Q2NL68 480 aa23.83■■□□□ 1.41
SBDS-204ENST00000490953 LRP10Q7Z4F1 713 aa23.83■■□□□ 1.41
SBDS-204ENST00000490953 ANKRD36CQ5JPF3 1778 aa23.83■■□□□ 1.4
SBDS-204ENST00000490953 UBN2Q6ZU65 1347 aa23.83■■□□□ 1.4
SBDS-204ENST00000490953 ABCC12Q96J65 1359 aa23.82■■□□□ 1.4
SBDS-204ENST00000490953 APAF1O14727 1248 aa23.82■■□□□ 1.4
SBDS-204ENST00000490953 GIGYF2Q6Y7W6 1299 aaKnown RBP23.82■■□□□ 1.4
SBDS-204ENST00000490953 NUTM1Q86Y26 1132 aa23.82■■□□□ 1.4
SBDS-204ENST00000490953 DICER1Q9UPY3 1922 aaKnown RBP23.82■■□□□ 1.4
SBDS-204ENST00000490953 IBTKQ9P2D0 1353 aaPredicted RBP23.81■■□□□ 1.4
SBDS-204ENST00000490953 KLRG2A4D1S0 409 aaPredicted RBP23.81■■□□□ 1.4
SBDS-204ENST00000490953 ZNF316A6NFI3 1004 aaPredicted RBP23.81■■□□□ 1.4
SBDS-204ENST00000490953 SOGA3Q5TF21 947 aa23.81■■□□□ 1.4
SBDS-204ENST00000490953 CFAP44Q96MT7 982 aa23.8■■□□□ 1.4
SBDS-204ENST00000490953 ERFEQ4G0M1 354 aa23.79■■□□□ 1.4
SBDS-204ENST00000490953 SUSD4Q5VX71 490 aa23.79■■□□□ 1.4
SBDS-204ENST00000490953 ZNF34Q8IZ26 560 aa23.79■■□□□ 1.4
SBDS-204ENST00000490953 TAOK3Q9H2K8 898 aa23.79■■□□□ 1.4
SBDS-204ENST00000490953 TOMM70O94826 608 aa23.78■■□□□ 1.4
SBDS-204ENST00000490953 AIMP1Q12904 312 aaKnown RBP23.78■■□□□ 1.4
SBDS-204ENST00000490953 CCDC184Q52MB2 194 aa23.78■■□□□ 1.4
SBDS-204ENST00000490953 C16orf71Q8IYS4 520 aaPredicted RBP23.78■■□□□ 1.4
SBDS-204ENST00000490953 DDX21Q9NR30 783 aaKnown RBP eCLIP23.78■■□□□ 1.4
SBDS-204ENST00000490953 LTBP3Q9NS15 1303 aa23.78■■□□□ 1.4
SBDS-204ENST00000490953 RIC1Q4ADV7 1423 aa23.77■■□□□ 1.4
SBDS-204ENST00000490953 HOXB7P09629 217 aa23.77■■□□□ 1.4
SBDS-204ENST00000490953 PARP10Q53GL7 1025 aa23.77■■□□□ 1.4
SBDS-204ENST00000490953 HDGFL1Q5TGJ6 251 aa23.77■■□□□ 1.4
SBDS-204ENST00000490953 COPS6Q7L5N1 327 aa23.77■■□□□ 1.4
SBDS-204ENST00000490953 PPP1R42Q7Z4L9 355 aa23.77■■□□□ 1.4
SBDS-204ENST00000490953 XAGE3Q8WTP9 111 aa23.77■■□□□ 1.4
SBDS-204ENST00000490953 MBIPQ9NS73 344 aa23.77■■□□□ 1.4
SBDS-204ENST00000490953 NTSR2O95665 410 aa23.76■■□□□ 1.39
SBDS-204ENST00000490953 HSPA6P17066 643 aa23.76■■□□□ 1.39
SBDS-204ENST00000490953 CALD1Q05682 793 aaKnown RBP23.76■■□□□ 1.39
SBDS-204ENST00000490953 CCDC93Q567U6 631 aa23.76■■□□□ 1.39
SBDS-204ENST00000490953 RRAGCQ9HB90 399 aa23.76■■□□□ 1.39
SBDS-204ENST00000490953 CHPF2Q9P2E5 772 aa23.76■■□□□ 1.39
SBDS-204ENST00000490953 ALDH1B1P30837 517 aa23.75■■□□□ 1.39
SBDS-204ENST00000490953 GLTPD2A6NH11 291 aa23.74■■□□□ 1.39
SBDS-204ENST00000490953 CRY2Q49AN0 593 aa23.74■■□□□ 1.39
SBDS-204ENST00000490953 HSP90AB3PQ58FF7 597 aa23.74■■□□□ 1.39
SBDS-204ENST00000490953 DUSP27Q5VZP5 1158 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms