RNA–Protein interactions for RNA: ENST00000490456.6

SKAP2-207, Transcript of src kinase associated phosphoprotein 2, humanhuman

TSL 4

Gene SKAP2, Length 558 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP2-207ENST00000490456 PIM2Q9P1W9 311 aa11.85□□□□□ -0.51
SKAP2-207ENST00000490456 RTCBQ9Y3I0 505 aaKnown RBP11.85□□□□□ -0.51
SKAP2-207ENST00000490456 ANKRD26Q9UPS8 1709 aa11.85□□□□□ -0.51
SKAP2-207ENST00000490456 ITPK1Q13572 414 aa11.84□□□□□ -0.51
SKAP2-207ENST00000490456 DOK7Q18PE1 504 aa11.84□□□□□ -0.51
SKAP2-207ENST00000490456 TRAPPC3LQ5T215 181 aa11.84□□□□□ -0.51
SKAP2-207ENST00000490456 DCAF5Q96JK2 942 aa11.84□□□□□ -0.51
SKAP2-207ENST00000490456 CFAP53Q96M91 514 aa11.84□□□□□ -0.51
SKAP2-207ENST00000490456 KRTAP3-3Q9BYR6 98 aa11.84□□□□□ -0.51
SKAP2-207ENST00000490456 KRTAP3-2Q9BYR7 98 aa11.84□□□□□ -0.51
SKAP2-207ENST00000490456 TMOD3Q9NYL9 352 aa11.84□□□□□ -0.51
SKAP2-207ENST00000490456 PARP3Q9Y6F1 533 aa11.84□□□□□ -0.51
SKAP2-207ENST00000490456 IL13P35225 146 aa11.83□□□□□ -0.52
SKAP2-207ENST00000490456 DALRD3Q5D0E6 543 aaKnown RBP11.83□□□□□ -0.52
SKAP2-207ENST00000490456 SPOCK2Q92563 424 aa11.83□□□□□ -0.52
SKAP2-207ENST00000490456 EYA1Q99502 592 aa11.83□□□□□ -0.52
SKAP2-207ENST00000490456 PRKRIP1Q9H875 184 aaPredicted RBP11.83□□□□□ -0.52
SKAP2-207ENST00000490456 SPG7Q9UQ90 795 aa11.83□□□□□ -0.52
SKAP2-207ENST00000490456 TIAM2Q8IVF5 1701 aa11.83□□□□□ -0.52
SKAP2-207ENST00000490456 RIMBP2O15034 1052 aa11.82□□□□□ -0.52
SKAP2-207ENST00000490456 DIAPH1O60610 1272 aaKnown RBP11.82□□□□□ -0.52
SKAP2-207ENST00000490456 KCNA3P22001 575 aa11.82□□□□□ -0.52
SKAP2-207ENST00000490456 DPY19L2Q6NUT2 758 aa11.82□□□□□ -0.52
SKAP2-207ENST00000490456 NCAPD2Q15021 1401 aa11.82□□□□□ -0.52
SKAP2-207ENST00000490456 MYBBP1AQ9BQG0 1328 aaKnown RBP11.82□□□□□ -0.52
SKAP2-207ENST00000490456 KDRP35968 1356 aa11.81□□□□□ -0.52
SKAP2-207ENST00000490456 CCDC88AQ3V6T2 1871 aa11.81□□□□□ -0.52
SKAP2-207ENST00000490456 GYS1P13807 737 aa11.81□□□□□ -0.52
SKAP2-207ENST00000490456 VEGFAP15692 232 aaPredicted RBP11.81□□□□□ -0.52
SKAP2-207ENST00000490456 RFC4P35249 363 aa11.81□□□□□ -0.52
SKAP2-207ENST00000490456 ASAP1Q9ULH1 1129 aa11.81□□□□□ -0.52
SKAP2-207ENST00000490456 POTEB3A0JP26 581 aa11.8□□□□□ -0.52
SKAP2-207ENST00000490456 ANP32CO43423 234 aa11.8□□□□□ -0.52
SKAP2-207ENST00000490456 RC3H1Q5TC82 1133 aaKnown RBP11.8□□□□□ -0.52
SKAP2-207ENST00000490456 POTEBQ6S5H4 581 aa11.8□□□□□ -0.52
SKAP2-207ENST00000490456 ARHGEF1Q92888 912 aaKnown RBP11.8□□□□□ -0.52
SKAP2-207ENST00000490456 DLEC1Q9Y238 1755 aa11.79□□□□□ -0.52
SKAP2-207ENST00000490456 MYH14Q7Z406 1995 aaKnown RBP11.79□□□□□ -0.52
SKAP2-207ENST00000490456 KDM6AO15550 1401 aaPredicted RBP11.79□□□□□ -0.52
SKAP2-207ENST00000490456 U2SURPO15042 1029 aaKnown RBP11.79□□□□□ -0.52
SKAP2-207ENST00000490456 AEBP1Q8IUX7 1158 aa11.79□□□□□ -0.52
SKAP2-207ENST00000490456 ATG3Q9NT62 314 aa11.79□□□□□ -0.52
SKAP2-207ENST00000490456 CNTNAP4Q9C0A0 1308 aa11.79□□□□□ -0.52
SKAP2-207ENST00000490456 COL3A1P02461 1466 aaPredicted RBP11.78□□□□□ -0.52
SKAP2-207ENST00000490456 GLTPD2A6NH11 291 aa11.78□□□□□ -0.52
SKAP2-207ENST00000490456 RPS6KA4O75676 772 aa11.78□□□□□ -0.52
SKAP2-207ENST00000490456 SULT6B1Q6IMI4 303 aa11.78□□□□□ -0.52
SKAP2-207ENST00000490456 IFNL2Q8IZJ0 200 aa11.78□□□□□ -0.52
SKAP2-207ENST00000490456 NUDCQ9Y266 331 aa11.78□□□□□ -0.52
SKAP2-207ENST00000490456 HMOX1P09601 288 aa11.77□□□□□ -0.53
SKAP2-207ENST00000490456 HOXB1P14653 301 aaPredicted RBP11.77□□□□□ -0.53
SKAP2-207ENST00000490456 DICER1Q9UPY3 1922 aaKnown RBP11.76□□□□□ -0.53
SKAP2-207ENST00000490456 PHKG2P15735 406 aa11.76□□□□□ -0.53
SKAP2-207ENST00000490456 LMNB1P20700 586 aa11.76□□□□□ -0.53
SKAP2-207ENST00000490456 PRDM10Q9NQV6 1147 aa11.76□□□□□ -0.53
SKAP2-207ENST00000490456 AFDNP55196 1824 aaKnown RBP11.75□□□□□ -0.53
SKAP2-207ENST00000490456 U2AF1L5P0DN76 240 aaPredicted RBP11.75□□□□□ -0.53
SKAP2-207ENST00000490456 HOXB3P14651 431 aaPredicted RBP11.75□□□□□ -0.53
SKAP2-207ENST00000490456 U2AF1Q01081 240 aaKnown RBP eCLIP11.75□□□□□ -0.53
SKAP2-207ENST00000490456 CHRNA5P30532 468 aa11.74□□□□□ -0.53
SKAP2-207ENST00000490456 RASSF7Q02833 373 aa11.74□□□□□ -0.53
SKAP2-207ENST00000490456 SLC4A9Q96Q91 983 aa11.74□□□□□ -0.53
SKAP2-207ENST00000490456 USP42Q9H9J4 1324 aaKnown RBP11.74□□□□□ -0.53
SKAP2-207ENST00000490456 NRXN2Q9P2S2 1712 aa11.74□□□□□ -0.53
SKAP2-207ENST00000490456 ERVV-2B6SEH9 535 aa11.73□□□□□ -0.53
SKAP2-207ENST00000490456 FOXN1O15353 648 aa11.73□□□□□ -0.53
SKAP2-207ENST00000490456 DDR1Q08345 913 aa11.73□□□□□ -0.53
SKAP2-207ENST00000490456 PLEKHO1Q53GL0 409 aaPredicted RBP11.73□□□□□ -0.53
SKAP2-207ENST00000490456 VIRMAQ69YN4 1812 aaKnown RBP11.72□□□□□ -0.53
SKAP2-207ENST00000490456 TJP1Q07157 1748 aa11.72□□□□□ -0.53
SKAP2-207ENST00000490456 ADAMTS7Q9UKP4 1686 aa11.72□□□□□ -0.53
SKAP2-207ENST00000490456 CTCFP49711 727 aaPredicted RBP11.72□□□□□ -0.53
SKAP2-207ENST00000490456 AMOTQ4VCS5 1084 aa11.72□□□□□ -0.53
SKAP2-207ENST00000490456 AIDAQ96BJ3 306 aa11.72□□□□□ -0.53
SKAP2-207ENST00000490456 MKRN1Q9UHC7 482 aaKnown RBP11.72□□□□□ -0.53
SKAP2-207ENST00000490456 CNTNAP1P78357 1384 aa11.71□□□□□ -0.53
SKAP2-207ENST00000490456 POLRMTO00411 1230 aaKnown RBP11.71□□□□□ -0.53
SKAP2-207ENST00000490456 HSP90AB1P08238 724 aaKnown RBP11.71□□□□□ -0.53
SKAP2-207ENST00000490456 PRKAR2BP31323 418 aa11.71□□□□□ -0.53
SKAP2-207ENST00000490456 WDR43Q15061 677 aaKnown RBP eCLIP11.71□□□□□ -0.53
SKAP2-207ENST00000490456 DIEXFQ68CQ4 756 aaKnown RBP11.71□□□□□ -0.53
SKAP2-207ENST00000490456 ZNF530Q6P9A1 599 aaPredicted RBP11.71□□□□□ -0.53
SKAP2-207ENST00000490456 RSPH6AQ9H0K4 717 aa11.71□□□□□ -0.53
SKAP2-207ENST00000490456 POTECB2RU33 542 aa11.7□□□□□ -0.54
SKAP2-207ENST00000490456 CRKLP46109 303 aaKnown RBP11.7□□□□□ -0.54
SKAP2-207ENST00000490456 SRP68Q9UHB9 627 aaKnown RBP11.7□□□□□ -0.54
SKAP2-207ENST00000490456 FER1L6Q2WGJ9 1857 aa11.7□□□□□ -0.54
SKAP2-207ENST00000490456 TM4SF1P30408 202 aa11.69□□□□□ -0.54
SKAP2-207ENST00000490456 MTHFSDQ2M296 383 aaKnown RBP11.69□□□□□ -0.54
SKAP2-207ENST00000490456 FAM161AQ3B820 660 aa11.69□□□□□ -0.54
SKAP2-207ENST00000490456 CCDC184Q52MB2 194 aa11.69□□□□□ -0.54
SKAP2-207ENST00000490456 C1orf141Q5JVX7 400 aa11.69□□□□□ -0.54
SKAP2-207ENST00000490456 TTLL6Q8N841 843 aa11.69□□□□□ -0.54
SKAP2-207ENST00000490456 RNF166Q96A37 237 aaPredicted RBP11.69□□□□□ -0.54
SKAP2-207ENST00000490456 MRS2Q9HD23 443 aa11.69□□□□□ -0.54
SKAP2-207ENST00000490456 SCN4AP35499 1836 aa11.68□□□□□ -0.54
SKAP2-207ENST00000490456 PHACTR3Q96KR7 559 aa11.68□□□□□ -0.54
SKAP2-207ENST00000490456 NFKBIEO00221 500 aa11.67□□□□□ -0.54
SKAP2-207ENST00000490456 ZPR1O75312 459 aa11.67□□□□□ -0.54
SKAP2-207ENST00000490456 NEFMP07197 916 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms