RNA–Protein interactions for RNA: ENST00000489937.5

FGF1-210, Transcript of fibroblast growth factor 1, humanhuman

TSL 3

Gene FGF1, Length 958 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGF1-210ENST00000489937 R3HDM1Q15032 1099 aaKnown RBP12.52□□□□□ -0.41
FGF1-210ENST00000489937 KRT24Q2M2I5 525 aa12.52□□□□□ -0.41
FGF1-210ENST00000489937 TWISTNBQ3B726 338 aaPredicted RBP12.52□□□□□ -0.41
FGF1-210ENST00000489937 TRAPPC3LQ5T215 181 aa12.52□□□□□ -0.41
FGF1-210ENST00000489937 HDGFL1Q5TGJ6 251 aa12.52□□□□□ -0.41
FGF1-210ENST00000489937 CCDC30Q5VVM6 783 aa12.52□□□□□ -0.41
FGF1-210ENST00000489937 C8orf58Q8NAV2 365 aa12.52□□□□□ -0.41
FGF1-210ENST00000489937 DBF4Q9UBU7 674 aaPredicted RBP12.52□□□□□ -0.41
FGF1-210ENST00000489937 NBPF26B4DH59 902 aa12.51□□□□□ -0.41
FGF1-210ENST00000489937 A1BGP04217 495 aa12.51□□□□□ -0.41
FGF1-210ENST00000489937 PDIA6Q15084 440 aa12.51□□□□□ -0.41
FGF1-210ENST00000489937 NBPF10Q6P3W6 841 aaKnown RBP12.51□□□□□ -0.41
FGF1-210ENST00000489937 COL23A1Q86Y22 540 aaPredicted RBP12.51□□□□□ -0.41
FGF1-210ENST00000489937 NBPF15Q8N660 670 aa12.51□□□□□ -0.41
FGF1-210ENST00000489937 DDX21Q9NR30 783 aaKnown RBP eCLIP12.51□□□□□ -0.41
FGF1-210ENST00000489937 COL15A1P39059 1388 aa12.51□□□□□ -0.41
FGF1-210ENST00000489937 VAMP4O75379 141 aa12.5□□□□□ -0.41
FGF1-210ENST00000489937 CANXP27824 592 aaKnown RBP12.5□□□□□ -0.41
FGF1-210ENST00000489937 EXOSC9Q06265 439 aaKnown RBP12.5□□□□□ -0.41
FGF1-210ENST00000489937 LRP10Q7Z4F1 713 aa12.5□□□□□ -0.41
FGF1-210ENST00000489937 NPM2Q86SE8 214 aaKnown RBP12.5□□□□□ -0.41
FGF1-210ENST00000489937 AMIGO3Q86WK7 504 aa12.5□□□□□ -0.41
FGF1-210ENST00000489937 TSPYL6Q8N831 410 aa12.5□□□□□ -0.41
FGF1-210ENST00000489937 ARHGEF1Q92888 912 aaKnown RBP12.5□□□□□ -0.41
FGF1-210ENST00000489937 CDCA7LQ96GN5 454 aa12.5□□□□□ -0.41
FGF1-210ENST00000489937 USP42Q9H9J4 1324 aaKnown RBP12.5□□□□□ -0.41
FGF1-210ENST00000489937 EIF2S2P20042 333 aaKnown RBP12.49□□□□□ -0.41
FGF1-210ENST00000489937 RFC4P35249 363 aa12.49□□□□□ -0.41
FGF1-210ENST00000489937 MTFR1LQ9H019 292 aa12.49□□□□□ -0.41
FGF1-210ENST00000489937 HYPKQ9NX55 129 aa12.49□□□□□ -0.41
FGF1-210ENST00000489937 NARFQ9UHQ1 456 aa12.49□□□□□ -0.41
FGF1-210ENST00000489937 BCORQ6W2J9 1755 aa12.48□□□□□ -0.41
FGF1-210ENST00000489937 SCN7AQ01118 1682 aa12.48□□□□□ -0.41
FGF1-210ENST00000489937 ERVV-1B6SEH8 477 aa12.48□□□□□ -0.41
FGF1-210ENST00000489937 PYGBP11216 843 aa12.48□□□□□ -0.41
FGF1-210ENST00000489937 CLEC4GQ6UXB4 293 aa12.48□□□□□ -0.41
FGF1-210ENST00000489937 NLGN1Q8N2Q7 840 aa12.48□□□□□ -0.41
FGF1-210ENST00000489937 RNF25Q96BH1 459 aaPredicted RBP12.48□□□□□ -0.41
FGF1-210ENST00000489937 PSDA5PKW4 1024 aaPredicted RBP12.47□□□□□ -0.41
FGF1-210ENST00000489937 ELL2O00472 640 aaPredicted RBP12.47□□□□□ -0.41
FGF1-210ENST00000489937 ZPR1O75312 459 aa12.47□□□□□ -0.41
FGF1-210ENST00000489937 PHF14O94880 888 aa12.47□□□□□ -0.41
FGF1-210ENST00000489937 DZIP3Q86Y13 1208 aaKnown RBP12.47□□□□□ -0.41
FGF1-210ENST00000489937 STK31Q9BXU1 1019 aa12.47□□□□□ -0.41
FGF1-210ENST00000489937 CHPF2Q9P2E5 772 aa12.47□□□□□ -0.41
FGF1-210ENST00000489937 CAMTA2O94983 1202 aa12.46□□□□□ -0.41
FGF1-210ENST00000489937 CHRM1P11229 460 aaPredicted RBP12.46□□□□□ -0.41
FGF1-210ENST00000489937 ALDH1L2Q3SY69 923 aa12.46□□□□□ -0.41
FGF1-210ENST00000489937 LRP5O75197 1615 aa12.45□□□□□ -0.42
FGF1-210ENST00000489937 MAP3K15Q6ZN16 1313 aa12.45□□□□□ -0.42
FGF1-210ENST00000489937 GYS1P13807 737 aa12.45□□□□□ -0.42
FGF1-210ENST00000489937 MYL6BP14649 208 aa12.45□□□□□ -0.42
FGF1-210ENST00000489937 BRPF1P55201 1214 aaPredicted RBP12.45□□□□□ -0.42
FGF1-210ENST00000489937 PROSER3Q2NL68 480 aa12.45□□□□□ -0.42
FGF1-210ENST00000489937 SPON1Q9HCB6 807 aa12.45□□□□□ -0.42
FGF1-210ENST00000489937 ZNF652Q9Y2D9 606 aa12.45□□□□□ -0.42
FGF1-210ENST00000489937 KIF6Q6ZMV9 814 aa12.44□□□□□ -0.42
FGF1-210ENST00000489937 SGIP1Q9BQI5 828 aa12.44□□□□□ -0.42
FGF1-210ENST00000489937 PDGFDQ9GZP0 370 aaPredicted RBP12.44□□□□□ -0.42
FGF1-210ENST00000489937 PIP4K2AP48426 406 aaPredicted RBP12.43□□□□□ -0.42
FGF1-210ENST00000489937 USPL1Q5W0Q7 1092 aa12.43□□□□□ -0.42
FGF1-210ENST00000489937 GIGYF2Q6Y7W6 1299 aaKnown RBP12.43□□□□□ -0.42
FGF1-210ENST00000489937 COPS6Q7L5N1 327 aa12.43□□□□□ -0.42
FGF1-210ENST00000489937 PLBD2Q8NHP8 589 aa12.43□□□□□ -0.42
FGF1-210ENST00000489937 XAGE3Q8WTP9 111 aa12.43□□□□□ -0.42
FGF1-210ENST00000489937 NECTIN2Q92692 538 aa12.43□□□□□ -0.42
FGF1-210ENST00000489937 BCL2L12Q9HB09 334 aa12.43□□□□□ -0.42
FGF1-210ENST00000489937 TBC1D2BQ9UPU7 963 aa12.43□□□□□ -0.42
FGF1-210ENST00000489937 ZNF330Q9Y3S2 320 aaPredicted RBP12.43□□□□□ -0.42
FGF1-210ENST00000489937 NUP98P52948 1817 aa12.43□□□□□ -0.42
FGF1-210ENST00000489937 ATP10DQ9P241 1426 aa12.43□□□□□ -0.42
FGF1-210ENST00000489937 RIOK3O14730 519 aaKnown RBP12.42□□□□□ -0.42
FGF1-210ENST00000489937 DDX58O95786 925 aaKnown RBP12.42□□□□□ -0.42
FGF1-210ENST00000489937 POLD1P28340 1107 aa12.42□□□□□ -0.42
FGF1-210ENST00000489937 TM4SF1P30408 202 aa12.42□□□□□ -0.42
FGF1-210ENST00000489937 HSP90AB3PQ58FF7 597 aa12.42□□□□□ -0.42
FGF1-210ENST00000489937 SMIM5Q71RC9 77 aa12.42□□□□□ -0.42
FGF1-210ENST00000489937 SRP68Q9UHB9 627 aaKnown RBP12.42□□□□□ -0.42
FGF1-210ENST00000489937 ZBTB7AO95365 584 aa12.41□□□□□ -0.42
FGF1-210ENST00000489937 ANXA1P04083 346 aa12.41□□□□□ -0.42
FGF1-210ENST00000489937 PTGER2P43116 358 aa12.41□□□□□ -0.42
FGF1-210ENST00000489937 TTLL7Q6ZT98 887 aa12.41□□□□□ -0.42
FGF1-210ENST00000489937 ANKRD13DQ6ZTN6 518 aa12.41□□□□□ -0.42
FGF1-210ENST00000489937 IBTKQ9P2D0 1353 aaPredicted RBP12.41□□□□□ -0.42
FGF1-210ENST00000489937 ANKRD36CQ5JPF3 1778 aa12.41□□□□□ -0.42
FGF1-210ENST00000489937 PTPRCP08575 1304 aa12.4□□□□□ -0.42
FGF1-210ENST00000489937 NRXN2Q9P2S2 1712 aa12.4□□□□□ -0.42
FGF1-210ENST00000489937 RARSP54136 660 aaKnown RBP12.4□□□□□ -0.42
FGF1-210ENST00000489937 FLIIQ13045 1269 aa12.4□□□□□ -0.42
FGF1-210ENST00000489937 KSR2Q6VAB6 950 aa12.4□□□□□ -0.42
FGF1-210ENST00000489937 MRPL50Q8N5N7 158 aaKnown RBP12.4□□□□□ -0.42
FGF1-210ENST00000489937 SSH1Q8WYL5 1049 aa12.4□□□□□ -0.42
FGF1-210ENST00000489937 PHAXQ9H814 394 aaKnown RBP12.4□□□□□ -0.42
FGF1-210ENST00000489937 ARFGEF2Q9Y6D5 1785 aa12.4□□□□□ -0.42
FGF1-210ENST00000489937 CARMIL3Q8ND23 1372 aa12.4□□□□□ -0.42
FGF1-210ENST00000489937 RNF123Q5XPI4 1314 aa12.39□□□□□ -0.43
FGF1-210ENST00000489937 MMP10P09238 476 aa12.39□□□□□ -0.43
FGF1-210ENST00000489937 AIMP1Q12904 312 aaKnown RBP12.39□□□□□ -0.43
FGF1-210ENST00000489937 TRIM28Q13263 835 aaKnown RBP12.39□□□□□ -0.43
FGF1-210ENST00000489937 TCIRG1Q13488 830 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms