RNA–Protein interactions for RNA: ENST00000489912.1

LSM10-203, Transcript of LSM10, U7 small nuclear RNA associated, humanhuman

TSL 3

Gene LSM10, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM10-203ENST00000489912 CCER2I3L3R5 266 aa29.48■■■□□ 2.31
LSM10-203ENST00000489912 PDIA6Q15084 440 aa29.48■■■□□ 2.31
LSM10-203ENST00000489912 HLFQ16534 295 aa29.48■■■□□ 2.31
LSM10-203ENST00000489912 ZBTB3Q9H5J0 574 aa29.47■■■□□ 2.31
LSM10-203ENST00000489912 CARMIL3Q8ND23 1372 aa29.47■■■□□ 2.31
LSM10-203ENST00000489912 NPHP1O15259 732 aa29.46■■■□□ 2.31
LSM10-203ENST00000489912 DPEP1P16444 411 aa29.46■■■□□ 2.31
LSM10-203ENST00000489912 YBX3P16989 372 aaKnown RBP eCLIP29.46■■■□□ 2.31
LSM10-203ENST00000489912 TGFB2P61812 414 aa29.46■■■□□ 2.31
LSM10-203ENST00000489912 CCDC24Q8N4L8 307 aa29.46■■■□□ 2.31
LSM10-203ENST00000489912 CHPF2Q9P2E5 772 aa29.46■■■□□ 2.31
LSM10-203ENST00000489912 GOLGB1Q14789 3259 aaKnown RBP29.46■■■□□ 2.31
LSM10-203ENST00000489912 MAP3K15Q6ZN16 1313 aa29.45■■■□□ 2.31
LSM10-203ENST00000489912 HOXB7P09629 217 aa29.45■■■□□ 2.31
LSM10-203ENST00000489912 AIMP1Q12904 312 aaKnown RBP29.45■■■□□ 2.31
LSM10-203ENST00000489912 NCBP3Q53F19 620 aaKnown RBP29.45■■■□□ 2.31
LSM10-203ENST00000489912 CLEC4GQ6UXB4 293 aa29.45■■■□□ 2.31
LSM10-203ENST00000489912 C8orf58Q8NAV2 365 aa29.44■■■□□ 2.3
LSM10-203ENST00000489912 NIP7Q9Y221 180 aaKnown RBP eCLIP29.44■■■□□ 2.3
LSM10-203ENST00000489912 FAM177BA6PVY3 158 aa29.43■■■□□ 2.3
LSM10-203ENST00000489912 MIER1Q8N108 512 aa29.43■■■□□ 2.3
LSM10-203ENST00000489912 IL16Q14005 1332 aa29.43■■■□□ 2.3
LSM10-203ENST00000489912 LRP10Q7Z4F1 713 aa29.42■■■□□ 2.3
LSM10-203ENST00000489912 XAGE3Q8WTP9 111 aa29.42■■■□□ 2.3
LSM10-203ENST00000489912 DDX21Q9NR30 783 aaKnown RBP eCLIP29.42■■■□□ 2.3
LSM10-203ENST00000489912 UTRNP46939 3433 aa29.42■■■□□ 2.3
LSM10-203ENST00000489912 ERVV-1B6SEH8 477 aa29.41■■■□□ 2.3
LSM10-203ENST00000489912 CHRNA5P30532 468 aa29.41■■■□□ 2.3
LSM10-203ENST00000489912 ANKRD31Q8N7Z5 1873 aa29.4■■■□□ 2.3
LSM10-203ENST00000489912 CHD4Q14839 1912 aa29.4■■■□□ 2.3
LSM10-203ENST00000489912 PRR5LQ6MZQ0 368 aa29.4■■■□□ 2.3
LSM10-203ENST00000489912 COPS6Q7L5N1 327 aa29.4■■■□□ 2.3
LSM10-203ENST00000489912 NBPF5PQ86XG9 351 aaPredicted RBP29.4■■■□□ 2.3
LSM10-203ENST00000489912 WDR63Q8IWG1 891 aa29.4■■■□□ 2.3
LSM10-203ENST00000489912 TSPYL6Q8N831 410 aa29.4■■■□□ 2.3
LSM10-203ENST00000489912 CNBD1Q8NA66 436 aa29.4■■■□□ 2.3
LSM10-203ENST00000489912 BRCA1P38398 1863 aaKnown RBP29.4■■■□□ 2.3
LSM10-203ENST00000489912 GPTP24298 496 aa29.38■■■□□ 2.29
LSM10-203ENST00000489912 DBF4Q9UBU7 674 aaPredicted RBP29.38■■■□□ 2.29
LSM10-203ENST00000489912 BCS1LQ9Y276 419 aa29.38■■■□□ 2.29
LSM10-203ENST00000489912 FANCIQ9NVI1 1328 aa29.37■■■□□ 2.29
LSM10-203ENST00000489912 RGL2O15211 777 aa29.36■■■□□ 2.29
LSM10-203ENST00000489912 ST5P78524 1137 aa29.36■■■□□ 2.29
LSM10-203ENST00000489912 GRIN3BO60391 1043 aa29.35■■■□□ 2.29
LSM10-203ENST00000489912 KCNA3P22001 575 aa29.35■■■□□ 2.29
LSM10-203ENST00000489912 C2CD5Q86YS7 1000 aa29.35■■■□□ 2.29
LSM10-203ENST00000489912 GIGYF2Q6Y7W6 1299 aaKnown RBP29.34■■■□□ 2.29
LSM10-203ENST00000489912 SPINK5Q9NQ38 1064 aaPredicted RBP29.34■■■□□ 2.29
LSM10-203ENST00000489912 PIM2Q9P1W9 311 aa29.34■■■□□ 2.29
LSM10-203ENST00000489912 TCERG1O14776 1098 aaKnown RBP29.33■■■□□ 2.29
LSM10-203ENST00000489912 TWISTNBQ3B726 338 aaPredicted RBP29.33■■■□□ 2.29
LSM10-203ENST00000489912 HYPKQ9NX55 129 aa29.33■■■□□ 2.29
LSM10-203ENST00000489912 ATP10DQ9P241 1426 aa29.33■■■□□ 2.29
LSM10-203ENST00000489912 ANKRD36CQ5JPF3 1778 aa29.33■■■□□ 2.29
LSM10-203ENST00000489912 DLEC1Q9Y238 1755 aa29.32■■■□□ 2.28
LSM10-203ENST00000489912 YY1P25490 414 aa29.32■■■□□ 2.28
LSM10-203ENST00000489912 GTF2E1P29083 439 aaPredicted RBP29.32■■■□□ 2.28
LSM10-203ENST00000489912 CCDC30Q5VVM6 783 aa29.32■■■□□ 2.28
LSM10-203ENST00000489912 TPTE2Q6XPS3 522 aa29.32■■■□□ 2.28
LSM10-203ENST00000489912 BRIP1Q9BX63 1249 aa29.32■■■□□ 2.28
LSM10-203ENST00000489912 COL11A2P13942 1736 aaPredicted RBP29.31■■■□□ 2.28
LSM10-203ENST00000489912 H0YIN7 160 aa29.31■■■□□ 2.28
LSM10-203ENST00000489912 GOLGA2Q08379 1002 aa29.31■■■□□ 2.28
LSM10-203ENST00000489912 UBN2Q6ZU65 1347 aa29.3■■■□□ 2.28
LSM10-203ENST00000489912 PDE6BP35913 854 aa29.3■■■□□ 2.28
LSM10-203ENST00000489912 EXOSC9Q06265 439 aaKnown RBP29.29■■■□□ 2.28
LSM10-203ENST00000489912 DALRD3Q5D0E6 543 aaKnown RBP29.29■■■□□ 2.28
LSM10-203ENST00000489912 ZNF34Q8IZ26 560 aa29.29■■■□□ 2.28
LSM10-203ENST00000489912 MYH16Q9H6N6 1097 aa29.29■■■□□ 2.28
LSM10-203ENST00000489912 PHAXQ9H814 394 aaKnown RBP29.29■■■□□ 2.28
LSM10-203ENST00000489912 CACNA1SQ13698 1873 aa29.29■■■□□ 2.28
LSM10-203ENST00000489912 ARFGEF1Q9Y6D6 1849 aa29.29■■■□□ 2.28
LSM10-203ENST00000489912 NUTM1Q86Y26 1132 aa29.28■■■□□ 2.28
LSM10-203ENST00000489912 ZNF622Q969S3 477 aaKnown RBP eCLIP29.28■■■□□ 2.28
LSM10-203ENST00000489912 ARFGEF2Q9Y6D5 1785 aa29.27■■■□□ 2.28
LSM10-203ENST00000489912 SUSD4Q5VX71 490 aa29.27■■■□□ 2.28
LSM10-203ENST00000489912 ANKRD13DQ6ZTN6 518 aa29.27■■■□□ 2.28
LSM10-203ENST00000489912 ZNF428Q96B54 188 aa29.27■■■□□ 2.28
LSM10-203ENST00000489912 CHMP4AQ9BY43 222 aa29.27■■■□□ 2.28
LSM10-203ENST00000489912 NYXQ9GZU5 481 aa29.27■■■□□ 2.28
LSM10-203ENST00000489912 ZNF521Q96K83 1311 aa29.26■■■□□ 2.27
LSM10-203ENST00000489912 PLBD2Q8NHP8 589 aa29.26■■■□□ 2.27
LSM10-203ENST00000489912 STK31Q9BXU1 1019 aa29.26■■■□□ 2.27
LSM10-203ENST00000489912 ERFEQ4G0M1 354 aa29.25■■■□□ 2.27
LSM10-203ENST00000489912 HSP90AB3PQ58FF7 597 aa29.25■■■□□ 2.27
LSM10-203ENST00000489912 ABCC12Q96J65 1359 aa29.24■■■□□ 2.27
LSM10-203ENST00000489912 TCIRG1Q13488 830 aa29.23■■■□□ 2.27
LSM10-203ENST00000489912 PARP10Q53GL7 1025 aa29.23■■■□□ 2.27
LSM10-203ENST00000489912 ARHGAP27Q6ZUM4 889 aa29.23■■■□□ 2.27
LSM10-203ENST00000489912 PPP1R42Q7Z4L9 355 aa29.23■■■□□ 2.27
LSM10-203ENST00000489912 RIC3Q7Z5B4 369 aa29.23■■■□□ 2.27
LSM10-203ENST00000489912 TNRC6CQ9HCJ0 1690 aaKnown RBP29.23■■■□□ 2.27
LSM10-203ENST00000489912 TTLL6Q8N841 843 aa29.22■■■□□ 2.27
LSM10-203ENST00000489912 NTSR2O95665 410 aa29.21■■■□□ 2.27
LSM10-203ENST00000489912 UTP14AQ9BVJ6 771 aaKnown RBP29.21■■■□□ 2.27
LSM10-203ENST00000489912 PDZRN3Q9UPQ7 1066 aa29.21■■■□□ 2.27
LSM10-203ENST00000489912 ATP5J2-PTCD1G3V325 749 aa29.2■■■□□ 2.26
LSM10-203ENST00000489912 VAMP4O75379 141 aa29.2■■■□□ 2.26
LSM10-203ENST00000489912 NLRP10Q86W26 655 aa29.2■■■□□ 2.26
LSM10-203ENST00000489912 ZNF219Q9P2Y4 722 aaPredicted RBP29.2■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms