RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 EFHC2Q5JST6 749 aa10.21□□□□□ -0.77
CCDC39-206ENST00000489868 PHLDB3Q6NSJ2 640 aa10.21□□□□□ -0.77
CCDC39-206ENST00000489868 LRRC69Q6ZNQ3 347 aa10.21□□□□□ -0.77
CCDC39-206ENST00000489868 NLRP8Q86W28 1048 aa10.21□□□□□ -0.77
CCDC39-206ENST00000489868 BNIP3LO60238 219 aa10.2□□□□□ -0.78
CCDC39-206ENST00000489868 ABHD17AQ96GS6 310 aa10.2□□□□□ -0.78
CCDC39-206ENST00000489868 BCS1LQ9Y276 419 aa10.2□□□□□ -0.78
CCDC39-206ENST00000489868 WIPF1O43516 503 aa10.19□□□□□ -0.78
CCDC39-206ENST00000489868 RTN1Q16799 776 aa10.19□□□□□ -0.78
CCDC39-206ENST00000489868 SUSD3Q96L08 255 aa10.19□□□□□ -0.78
CCDC39-206ENST00000489868 CNTNAP3BQ96NU0 1288 aa10.19□□□□□ -0.78
CCDC39-206ENST00000489868 CNTNAP3Q9BZ76 1288 aa10.19□□□□□ -0.78
CCDC39-206ENST00000489868 LRFN2Q9ULH4 789 aa10.19□□□□□ -0.78
CCDC39-206ENST00000489868 SSFA2P28290 1259 aa10.18□□□□□ -0.78
CCDC39-206ENST00000489868 SAP130Q9H0E3 1048 aa10.18□□□□□ -0.78
CCDC39-206ENST00000489868 KLK14Q9P0G3 267 aa10.18□□□□□ -0.78
CCDC39-206ENST00000489868 USTQ9Y2C2 406 aa10.18□□□□□ -0.78
CCDC39-206ENST00000489868 GPC6Q9Y625 555 aaPredicted RBP10.18□□□□□ -0.78
CCDC39-206ENST00000489868 DCDC2BA2VCK2 349 aa10.17□□□□□ -0.78
CCDC39-206ENST00000489868 ATXN7O15265 892 aaPredicted RBP10.17□□□□□ -0.78
CCDC39-206ENST00000489868 COX20Q5RI15 118 aa10.17□□□□□ -0.78
CCDC39-206ENST00000489868 PCDHGC4Q9Y5F7 938 aa10.17□□□□□ -0.78
CCDC39-206ENST00000489868 LORP23490 312 aaPredicted RBP10.16□□□□□ -0.78
CCDC39-206ENST00000489868 TNP2Q05952 138 aa10.16□□□□□ -0.78
CCDC39-206ENST00000489868 NAA30Q147X3 362 aaPredicted RBP10.16□□□□□ -0.78
CCDC39-206ENST00000489868 SAMD5Q5TGI4 173 aa10.16□□□□□ -0.78
CCDC39-206ENST00000489868 VTI1AQ96AJ9 217 aa10.16□□□□□ -0.78
CCDC39-206ENST00000489868 MYO19Q96H55 970 aa10.16□□□□□ -0.78
CCDC39-206ENST00000489868 CFHR5Q9BXR6 569 aa10.16□□□□□ -0.78
CCDC39-206ENST00000489868 SEPT3Q9UH03 358 aa10.16□□□□□ -0.78
CCDC39-206ENST00000489868 DGKZQ13574 1117 aa10.15□□□□□ -0.78
CCDC39-206ENST00000489868 FAM26DQ5JW98 314 aa10.15□□□□□ -0.78
CCDC39-206ENST00000489868 FOXR1Q6PIV2 292 aa10.15□□□□□ -0.78
CCDC39-206ENST00000489868 FIGNL1Q6PIW4 674 aa10.15□□□□□ -0.78
CCDC39-206ENST00000489868 COL26A1Q96A83 441 aa10.15□□□□□ -0.78
CCDC39-206ENST00000489868 TRERF1Q96PN7 1200 aa10.15□□□□□ -0.78
CCDC39-206ENST00000489868 STRN4Q9NRL3 753 aa10.15□□□□□ -0.78
CCDC39-206ENST00000489868 GJA3Q9Y6H8 435 aa10.15□□□□□ -0.78
CCDC39-206ENST00000489868 C2CD2LO14523 706 aa10.14□□□□□ -0.79
CCDC39-206ENST00000489868 EFSO43281 561 aa10.14□□□□□ -0.79
CCDC39-206ENST00000489868 FAM157BP0CG42 384 aa10.14□□□□□ -0.79
CCDC39-206ENST00000489868 MAPTP10636 758 aaKnown RBP10.14□□□□□ -0.79
CCDC39-206ENST00000489868 GRIN2CQ14957 1233 aa10.14□□□□□ -0.79
CCDC39-206ENST00000489868 DMGDHQ9UI17 866 aaKnown RBP10.14□□□□□ -0.79
CCDC39-206ENST00000489868 ATXN7L1Q9ULK2 861 aaPredicted RBP10.14□□□□□ -0.79
CCDC39-206ENST00000489868 KHNYNO15037 678 aaKnown RBP10.13□□□□□ -0.79
CCDC39-206ENST00000489868 CTBSQ01459 385 aa10.13□□□□□ -0.79
CCDC39-206ENST00000489868 MBIPQ9NS73 344 aa10.13□□□□□ -0.79
CCDC39-206ENST00000489868 TNFRSF10BO14763 440 aa10.12□□□□□ -0.79
CCDC39-206ENST00000489868 CD33P20138 364 aa10.12□□□□□ -0.79
CCDC39-206ENST00000489868 FGFR3P22607 806 aa10.12□□□□□ -0.79
CCDC39-206ENST00000489868 TYRO3Q06418 890 aa10.12□□□□□ -0.79
CCDC39-206ENST00000489868 MX2P20592 715 aa10.11□□□□□ -0.79
CCDC39-206ENST00000489868 C16orf46Q6P387 395 aa10.11□□□□□ -0.79
CCDC39-206ENST00000489868 BTLAQ7Z6A9 289 aa10.11□□□□□ -0.79
CCDC39-206ENST00000489868 NEUROD4Q9HD90 331 aa10.11□□□□□ -0.79
CCDC39-206ENST00000489868 ANKIB1Q9P2G1 1089 aa10.11□□□□□ -0.79
CCDC39-206ENST00000489868 TGFBR3LH3BV60 316 aa10.1□□□□□ -0.79
CCDC39-206ENST00000489868 PTCD1O75127 700 aaKnown RBP10.1□□□□□ -0.79
CCDC39-206ENST00000489868 GRNP28799 593 aaKnown RBP10.1□□□□□ -0.79
CCDC39-206ENST00000489868 SFSWAPQ12872 951 aaKnown RBP10.1□□□□□ -0.79
CCDC39-206ENST00000489868 C11orf91Q3C1V1 193 aa10.1□□□□□ -0.79
CCDC39-206ENST00000489868 PHF24Q9UPV7 400 aa10.1□□□□□ -0.79
CCDC39-206ENST00000489868 IGF1RP08069 1367 aa10.1□□□□□ -0.79
CCDC39-206ENST00000489868 ADAMTS2O95450 1211 aa10.09□□□□□ -0.79
CCDC39-206ENST00000489868 SLURP2P0DP57 97 aa10.09□□□□□ -0.79
CCDC39-206ENST00000489868 SRSF11Q05519 484 aaKnown RBP10.09□□□□□ -0.79
CCDC39-206ENST00000489868 IER5Q5VY09 327 aa10.09□□□□□ -0.79
CCDC39-206ENST00000489868 WHAMMQ8TF30 809 aa10.09□□□□□ -0.79
CCDC39-206ENST00000489868 CEP63Q96MT8 703 aa10.09□□□□□ -0.79
CCDC39-206ENST00000489868 ETFBKMTQ8IXQ9 262 aa10.08□□□□□ -0.8
CCDC39-206ENST00000489868 BRD7Q9NPI1 651 aa10.08□□□□□ -0.8
CCDC39-206ENST00000489868 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.08□□□□□ -0.8
CCDC39-206ENST00000489868 IFT43Q96FT9 208 aa10.07□□□□□ -0.8
CCDC39-206ENST00000489868 INPP5BP32019 993 aa10.06□□□□□ -0.8
CCDC39-206ENST00000489868 MARK1Q9P0L2 795 aa10.06□□□□□ -0.8
CCDC39-206ENST00000489868 OPLAHO14841 1288 aa10.05□□□□□ -0.8
CCDC39-206ENST00000489868 ZBTB39O15060 712 aa10.05□□□□□ -0.8
CCDC39-206ENST00000489868 MICAL2O94851 1124 aa10.05□□□□□ -0.8
CCDC39-206ENST00000489868 BMP4P12644 408 aa10.05□□□□□ -0.8
CCDC39-206ENST00000489868 IDH3AP50213 366 aa10.05□□□□□ -0.8
CCDC39-206ENST00000489868 MTMR3Q13615 1198 aa10.05□□□□□ -0.8
CCDC39-206ENST00000489868 LAMC2Q13753 1193 aa10.05□□□□□ -0.8
CCDC39-206ENST00000489868 HIF1AQ16665 826 aa10.05□□□□□ -0.8
CCDC39-206ENST00000489868 FAM182BQ5T319 152 aa10.05□□□□□ -0.8
CCDC39-206ENST00000489868 TREML1Q86YW5 311 aa10.05□□□□□ -0.8
CCDC39-206ENST00000489868 GTF3C2Q8WUA4 911 aaPredicted RBP10.05□□□□□ -0.8
CCDC39-206ENST00000489868 ACDQ96AP0 544 aa10.05□□□□□ -0.8
CCDC39-206ENST00000489868 SLC30A3Q99726 388 aa10.05□□□□□ -0.8
CCDC39-206ENST00000489868 DNMT3AQ9Y6K1 912 aaPredicted RBP10.05□□□□□ -0.8
CCDC39-206ENST00000489868 KCNQ4P56696 695 aa10.04□□□□□ -0.8
CCDC39-206ENST00000489868 LYPD4Q6UWN0 246 aa10.04□□□□□ -0.8
CCDC39-206ENST00000489868 KLF15Q9UIH9 416 aa10.04□□□□□ -0.8
CCDC39-206ENST00000489868 USP20Q9Y2K6 914 aa10.04□□□□□ -0.8
CCDC39-206ENST00000489868 ZNF385CQ66K41 422 aaPredicted RBP10.03□□□□□ -0.8
CCDC39-206ENST00000489868 BRD2P25440 801 aaKnown RBP10.02□□□□□ -0.81
CCDC39-206ENST00000489868 C1orf229Q6ZS94 237 aaPredicted RBP10.02□□□□□ -0.81
CCDC39-206ENST00000489868 RAB44Q7Z6P3 723 aaPredicted RBP10.02□□□□□ -0.81
CCDC39-206ENST00000489868 ZSCAN1Q8NBB4 408 aa10.02□□□□□ -0.81
CCDC39-206ENST00000489868 HELQQ8TDG4 1101 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms