RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 BICDL1Q6ZP65 573 aa10.29□□□□□ -0.76
COL9A1-209ENST00000489861 C7orf43Q8WVR3 580 aa10.29□□□□□ -0.76
COL9A1-209ENST00000489861 L3MBTL2Q969R5 705 aa10.29□□□□□ -0.76
COL9A1-209ENST00000489861 BRIP1Q9BX63 1249 aa10.29□□□□□ -0.76
COL9A1-209ENST00000489861 ZNF277Q9NRM2 450 aaPredicted RBP10.29□□□□□ -0.76
COL9A1-209ENST00000489861 EMILIN1Q9Y6C2 1016 aa10.29□□□□□ -0.76
COL9A1-209ENST00000489861 KIF24Q5T7B8 1368 aa10.28□□□□□ -0.76
COL9A1-209ENST00000489861 FZD9O00144 591 aa10.28□□□□□ -0.76
COL9A1-209ENST00000489861 DNAJC10Q8IXB1 793 aa10.28□□□□□ -0.76
COL9A1-209ENST00000489861 KIF20BQ96Q89 1820 aa10.28□□□□□ -0.76
COL9A1-209ENST00000489861 COL15A1P39059 1388 aa10.27□□□□□ -0.76
COL9A1-209ENST00000489861 PDE6BP35913 854 aa10.27□□□□□ -0.77
COL9A1-209ENST00000489861 EPS15P42566 896 aa10.27□□□□□ -0.77
COL9A1-209ENST00000489861 C1QBPQ07021 282 aaKnown RBP10.27□□□□□ -0.77
COL9A1-209ENST00000489861 PRR5LQ6MZQ0 368 aa10.27□□□□□ -0.77
COL9A1-209ENST00000489861 OLFM4Q6UX06 510 aa10.27□□□□□ -0.77
COL9A1-209ENST00000489861 HPS5Q9UPZ3 1129 aa10.27□□□□□ -0.77
COL9A1-209ENST00000489861 ANKRD26Q9UPS8 1709 aa10.27□□□□□ -0.77
COL9A1-209ENST00000489861 BCORQ6W2J9 1755 aa10.26□□□□□ -0.77
COL9A1-209ENST00000489861 COL4A5P29400 1685 aa10.26□□□□□ -0.77
COL9A1-209ENST00000489861 CABP4P57796 275 aa10.26□□□□□ -0.77
COL9A1-209ENST00000489861 GPC2Q8N158 579 aa10.26□□□□□ -0.77
COL9A1-209ENST00000489861 CNKSR1Q969H4 720 aa10.26□□□□□ -0.77
COL9A1-209ENST00000489861 HHIPL1Q96JK4 782 aa10.26□□□□□ -0.77
COL9A1-209ENST00000489861 PDZRN3Q9UPQ7 1066 aa10.26□□□□□ -0.77
COL9A1-209ENST00000489861 COL6A3P12111 3177 aa10.26□□□□□ -0.77
COL9A1-209ENST00000489861 CELF2O95319 508 aaKnown RBP10.25□□□□□ -0.77
COL9A1-209ENST00000489861 SRGNP10124 158 aa10.25□□□□□ -0.77
COL9A1-209ENST00000489861 CYP19A1P11511 503 aaPredicted RBP10.25□□□□□ -0.77
COL9A1-209ENST00000489861 SCNN1DP51172 638 aa10.25□□□□□ -0.77
COL9A1-209ENST00000489861 FKBP4Q02790 459 aaKnown RBP eCLIP10.25□□□□□ -0.77
COL9A1-209ENST00000489861 SOGA3Q5TF21 947 aa10.25□□□□□ -0.77
COL9A1-209ENST00000489861 TBC1D9BQ66K14 1250 aa10.25□□□□□ -0.77
COL9A1-209ENST00000489861 STYK1Q6J9G0 422 aa10.25□□□□□ -0.77
COL9A1-209ENST00000489861 CTU1Q7Z7A3 348 aaKnown RBP10.25□□□□□ -0.77
COL9A1-209ENST00000489861 NFATC2IPQ8NCF5 419 aa10.25□□□□□ -0.77
COL9A1-209ENST00000489861 PUS7Q96PZ0 661 aaKnown RBP10.25□□□□□ -0.77
COL9A1-209ENST00000489861 ZBTB1Q9Y2K1 713 aa10.25□□□□□ -0.77
COL9A1-209ENST00000489861 POLR2AP24928 1970 aaKnown RBP10.25□□□□□ -0.77
COL9A1-209ENST00000489861 CCDC93Q567U6 631 aa10.24□□□□□ -0.77
COL9A1-209ENST00000489861 TRPA1O75762 1119 aa10.23□□□□□ -0.77
COL9A1-209ENST00000489861 NOGQ13253 232 aa10.23□□□□□ -0.77
COL9A1-209ENST00000489861 GJA3Q9Y6H8 435 aa10.23□□□□□ -0.77
COL9A1-209ENST00000489861 SCN7AQ01118 1682 aa10.22□□□□□ -0.77
COL9A1-209ENST00000489861 PPM1GO15355 546 aaPredicted RBP10.22□□□□□ -0.77
COL9A1-209ENST00000489861 HSP90AB1P08238 724 aaKnown RBP10.22□□□□□ -0.77
COL9A1-209ENST00000489861 IARSP41252 1262 aaKnown RBP10.22□□□□□ -0.77
COL9A1-209ENST00000489861 USP50Q70EL3 339 aaPredicted RBP10.22□□□□□ -0.77
COL9A1-209ENST00000489861 SLC17A8Q8NDX2 589 aa10.22□□□□□ -0.77
COL9A1-209ENST00000489861 MASTLQ96GX5 879 aa10.22□□□□□ -0.77
COL9A1-209ENST00000489861 GLIS2Q9BZE0 524 aaPredicted RBP10.22□□□□□ -0.77
COL9A1-209ENST00000489861 RNF186Q9NXI6 227 aa10.22□□□□□ -0.77
COL9A1-209ENST00000489861 SAGE1Q9NXZ1 904 aa10.22□□□□□ -0.77
COL9A1-209ENST00000489861 FAM155AB1AL88 458 aaPredicted RBP10.21□□□□□ -0.77
COL9A1-209ENST00000489861 LMOD1P29536 600 aaPredicted RBP10.21□□□□□ -0.77
COL9A1-209ENST00000489861 SYNE4Q8N205 404 aa10.21□□□□□ -0.77
COL9A1-209ENST00000489861 ZNF408Q9H9D4 720 aa10.21□□□□□ -0.77
COL9A1-209ENST00000489861 WASHC2AQ641Q2 1341 aa10.21□□□□□ -0.78
COL9A1-209ENST00000489861 RANBP2P49792 3224 aaKnown RBP10.21□□□□□ -0.78
COL9A1-209ENST00000489861 ST20-MTHFSA0A0A6YYL1 179 aa10.2□□□□□ -0.78
COL9A1-209ENST00000489861 CENPFP49454 3210 aa10.2□□□□□ -0.78
COL9A1-209ENST00000489861 MTHFSP49914 203 aa10.2□□□□□ -0.78
COL9A1-209ENST00000489861 AKAP4Q5JQC9 854 aa10.2□□□□□ -0.78
COL9A1-209ENST00000489861 ZNF530Q6P9A1 599 aaPredicted RBP10.2□□□□□ -0.78
COL9A1-209ENST00000489861 SNED1Q8TER0 1413 aa10.2□□□□□ -0.78
COL9A1-209ENST00000489861 RNF216Q9NWF9 866 aaPredicted RBP10.2□□□□□ -0.78
COL9A1-209ENST00000489861 COLQQ9Y215 455 aaPredicted RBP10.2□□□□□ -0.78
COL9A1-209ENST00000489861 BRCA2P51587 3418 aa10.19□□□□□ -0.78
COL9A1-209ENST00000489861 HTTP42858 3142 aa10.19□□□□□ -0.78
COL9A1-209ENST00000489861 CANXP27824 592 aaKnown RBP10.19□□□□□ -0.78
COL9A1-209ENST00000489861 KIF23Q02241 960 aaPredicted RBP10.19□□□□□ -0.78
COL9A1-209ENST00000489861 DLK2Q6UY11 383 aa10.19□□□□□ -0.78
COL9A1-209ENST00000489861 CNBD1Q8NA66 436 aa10.19□□□□□ -0.78
COL9A1-209ENST00000489861 CNKSR2Q8WXI2 1034 aa10.19□□□□□ -0.78
COL9A1-209ENST00000489861 EIF5P55010 431 aaKnown RBP10.18□□□□□ -0.78
COL9A1-209ENST00000489861 HUNKP57058 714 aa10.18□□□□□ -0.78
COL9A1-209ENST00000489861 EIF4A2Q14240 407 aaKnown RBP10.18□□□□□ -0.78
COL9A1-209ENST00000489861 RTKN2Q8IZC4 609 aa10.18□□□□□ -0.78
COL9A1-209ENST00000489861 TESK2Q96S53 571 aa10.18□□□□□ -0.78
COL9A1-209ENST00000489861 CARD11Q9BXL7 1154 aa10.18□□□□□ -0.78
COL9A1-209ENST00000489861 PAPPA2Q9BXP8 1791 aa10.18□□□□□ -0.78
COL9A1-209ENST00000489861 EIF6P56537 245 aaKnown RBP10.17□□□□□ -0.78
COL9A1-209ENST00000489861 SLC39A6Q13433 755 aa10.17□□□□□ -0.78
COL9A1-209ENST00000489861 PLEKHO1Q53GL0 409 aaPredicted RBP10.17□□□□□ -0.78
COL9A1-209ENST00000489861 JDP2Q8WYK2 163 aa10.17□□□□□ -0.78
COL9A1-209ENST00000489861 CSRNP1Q96S65 589 aa10.17□□□□□ -0.78
COL9A1-209ENST00000489861 PGAP2Q9UHJ9 254 aa10.17□□□□□ -0.78
COL9A1-209ENST00000489861 NPR1P16066 1061 aa10.16□□□□□ -0.78
COL9A1-209ENST00000489861 PKN2Q16513 984 aaKnown RBP10.16□□□□□ -0.78
COL9A1-209ENST00000489861 RGMBQ6NW40 437 aa10.16□□□□□ -0.78
COL9A1-209ENST00000489861 ADARB2Q9NS39 739 aaKnown RBP10.16□□□□□ -0.78
COL9A1-209ENST00000489861 GPRC5DQ9NZD1 345 aa10.16□□□□□ -0.78
COL9A1-209ENST00000489861 TBC1D2BQ9UPU7 963 aa10.16□□□□□ -0.78
COL9A1-209ENST00000489861 RBBP6Q7Z6E9 1792 aaKnown RBP10.16□□□□□ -0.78
COL9A1-209ENST00000489861 UBR2Q8IWV8 1755 aa10.16□□□□□ -0.78
COL9A1-209ENST00000489861 KLRG2A4D1S0 409 aaPredicted RBP10.15□□□□□ -0.78
COL9A1-209ENST00000489861 POTEFA5A3E0 1075 aa10.15□□□□□ -0.78
COL9A1-209ENST00000489861 HIRAP54198 1017 aaPredicted RBP10.15□□□□□ -0.78
COL9A1-209ENST00000489861 ST5P78524 1137 aa10.15□□□□□ -0.78
COL9A1-209ENST00000489861 SETDB2Q96T68 719 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms