RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 ST5P78524 1137 aa16.5■□□□□ 0.23
SRRM1-216ENST00000489130 CCDC24Q8N4L8 307 aa16.5■□□□□ 0.23
SRRM1-216ENST00000489130 RRP7AQ9Y3A4 280 aaKnown RBP16.5■□□□□ 0.23
SRRM1-216ENST00000489130 COL11A2P13942 1736 aaPredicted RBP16.5■□□□□ 0.23
SRRM1-216ENST00000489130 ERBB4Q15303 1308 aa16.49■□□□□ 0.23
SRRM1-216ENST00000489130 ADAMTS8Q9UP79 889 aa16.49■□□□□ 0.23
SRRM1-216ENST00000489130 ERVV-1B6SEH8 477 aa16.48■□□□□ 0.23
SRRM1-216ENST00000489130 NPHP1O15259 732 aa16.48■□□□□ 0.23
SRRM1-216ENST00000489130 HLFQ16534 295 aa16.48■□□□□ 0.23
SRRM1-216ENST00000489130 NBPF5PQ86XG9 351 aaPredicted RBP16.48■□□□□ 0.23
SRRM1-216ENST00000489130 NIP7Q9Y221 180 aaKnown RBP eCLIP16.48■□□□□ 0.23
SRRM1-216ENST00000489130 KIF3CO14782 793 aa16.47■□□□□ 0.23
SRRM1-216ENST00000489130 RNF181Q9P0P0 153 aa16.47■□□□□ 0.23
SRRM1-216ENST00000489130 TRIM35Q9UPQ4 493 aa16.47■□□□□ 0.23
SRRM1-216ENST00000489130 MAP3K15Q6ZN16 1313 aa16.46■□□□□ 0.23
SRRM1-216ENST00000489130 SENP3-EIF4A1A0A087X0R7 540 aa16.46■□□□□ 0.23
SRRM1-216ENST00000489130 SRGNP10124 158 aa16.46■□□□□ 0.23
SRRM1-216ENST00000489130 RASSF7Q02833 373 aa16.46■□□□□ 0.23
SRRM1-216ENST00000489130 NEUROD2Q15784 382 aa16.46■□□□□ 0.23
SRRM1-216ENST00000489130 STYK1Q6J9G0 422 aa16.46■□□□□ 0.23
SRRM1-216ENST00000489130 TPTE2Q6XPS3 522 aa16.46■□□□□ 0.23
SRRM1-216ENST00000489130 NGEFQ8N5V2 710 aa16.46■□□□□ 0.23
SRRM1-216ENST00000489130 ZNF622Q969S3 477 aaKnown RBP eCLIP16.46■□□□□ 0.233e-11■■□□□ 12.4
SRRM1-216ENST00000489130 KLRG2A4D1S0 409 aaPredicted RBP16.45■□□□□ 0.22
SRRM1-216ENST00000489130 CHL1O00533 1208 aa16.45■□□□□ 0.22
SRRM1-216ENST00000489130 MYL6BP14649 208 aa16.45■□□□□ 0.22
SRRM1-216ENST00000489130 KIF6Q6ZMV9 814 aa16.45■□□□□ 0.22
SRRM1-216ENST00000489130 TTLL7Q6ZT98 887 aa16.45■□□□□ 0.22
SRRM1-216ENST00000489130 LRP10Q7Z4F1 713 aa16.45■□□□□ 0.22
SRRM1-216ENST00000489130 ZC3H4Q9UPT8 1303 aaKnown RBP16.45■□□□□ 0.22
SRRM1-216ENST00000489130 SBF1O95248 1867 aa16.44■□□□□ 0.22
SRRM1-216ENST00000489130 NFKBIEO00221 500 aa16.44■□□□□ 0.22
SRRM1-216ENST00000489130 LMNB1P20700 586 aa16.44■□□□□ 0.22
SRRM1-216ENST00000489130 PDIA6Q15084 440 aa16.44■□□□□ 0.22
SRRM1-216ENST00000489130 CNKSR1Q969H4 720 aa16.44■□□□□ 0.22
SRRM1-216ENST00000489130 MASTLQ96GX5 879 aa16.44■□□□□ 0.22
SRRM1-216ENST00000489130 PRELPP51888 382 aa16.43■□□□□ 0.22
SRRM1-216ENST00000489130 ARFGEF2Q9Y6D5 1785 aa16.43■□□□□ 0.22
SRRM1-216ENST00000489130 IBTKQ9P2D0 1353 aaPredicted RBP16.42■□□□□ 0.22
SRRM1-216ENST00000489130 C21orf2O43822 256 aa16.42■□□□□ 0.22
SRRM1-216ENST00000489130 EIF2S2P20042 333 aaKnown RBP16.42■□□□□ 0.22
SRRM1-216ENST00000489130 PRPF40BQ6NWY9 871 aaKnown RBP16.42■□□□□ 0.22
SRRM1-216ENST00000489130 NYXQ9GZU5 481 aa16.42■□□□□ 0.22
SRRM1-216ENST00000489130 ZBTB3Q9H5J0 574 aa16.42■□□□□ 0.22
SRRM1-216ENST00000489130 NMRK2Q9NPI5 230 aa16.42■□□□□ 0.22
SRRM1-216ENST00000489130 FAM177BA6PVY3 158 aa16.41■□□□□ 0.22
SRRM1-216ENST00000489130 NPR1P16066 1061 aa16.41■□□□□ 0.22
SRRM1-216ENST00000489130 PROSER3Q2NL68 480 aa16.41■□□□□ 0.22
SRRM1-216ENST00000489130 GIGYF2Q6Y7W6 1299 aaKnown RBP16.41■□□□□ 0.22
SRRM1-216ENST00000489130 UBN2Q6ZU65 1347 aa16.41■□□□□ 0.22
SRRM1-216ENST00000489130 KDM2BQ8NHM5 1336 aa16.41■□□□□ 0.22
SRRM1-216ENST00000489130 LTBP3Q9NS15 1303 aa16.41■□□□□ 0.22
SRRM1-216ENST00000489130 NUP98P52948 1817 aa16.4■□□□□ 0.22
SRRM1-216ENST00000489130 ABCC12Q96J65 1359 aa16.4■□□□□ 0.22
SRRM1-216ENST00000489130 RIC1Q4ADV7 1423 aa16.4■□□□□ 0.22
SRRM1-216ENST00000489130 KRT24Q2M2I5 525 aa16.4■□□□□ 0.22
SRRM1-216ENST00000489130 SOGA3Q5TF21 947 aa16.4■□□□□ 0.22
SRRM1-216ENST00000489130 ZNF34Q8IZ26 560 aa16.4■□□□□ 0.22
SRRM1-216ENST00000489130 SLX4Q8IY92 1834 aa16.4■□□□□ 0.22
SRRM1-216ENST00000489130 FER1L6Q2WGJ9 1857 aa16.39■□□□□ 0.22
SRRM1-216ENST00000489130 APAF1O14727 1248 aa16.39■□□□□ 0.21
SRRM1-216ENST00000489130 TOMM70O94826 608 aa16.39■□□□□ 0.21
SRRM1-216ENST00000489130 HOXB7P09629 217 aa16.39■□□□□ 0.21
SRRM1-216ENST00000489130 GPTP24298 496 aa16.39■□□□□ 0.21
SRRM1-216ENST00000489130 GTF2E1P29083 439 aaPredicted RBP16.39■□□□□ 0.21
SRRM1-216ENST00000489130 CRY2Q49AN0 593 aa16.39■□□□□ 0.21
SRRM1-216ENST00000489130 C7orf43Q8WVR3 580 aa16.39■□□□□ 0.21
SRRM1-216ENST00000489130 CFAP44Q96MT7 982 aa16.39■□□□□ 0.21
SRRM1-216ENST00000489130 ZNF219Q9P2Y4 722 aaPredicted RBP16.39■□□□□ 0.21
SRRM1-216ENST00000489130 LAS1LQ9Y4W2 734 aaKnown RBP16.39■□□□□ 0.21
SRRM1-216ENST00000489130 TNRC6CQ9HCJ0 1690 aaKnown RBP16.39■□□□□ 0.21
SRRM1-216ENST00000489130 ANXA1P04083 346 aa16.38■□□□□ 0.21
SRRM1-216ENST00000489130 NUTM1Q86Y26 1132 aa16.38■□□□□ 0.21
SRRM1-216ENST00000489130 TAOK3Q9H2K8 898 aa16.38■□□□□ 0.21
SRRM1-216ENST00000489130 TIAM2Q8IVF5 1701 aa16.38■□□□□ 0.21
SRRM1-216ENST00000489130 ZNF853P0CG23 659 aa16.37■□□□□ 0.21
SRRM1-216ENST00000489130 HSPA6P17066 643 aa16.37■□□□□ 0.21
SRRM1-216ENST00000489130 ERFEQ4G0M1 354 aa16.37■□□□□ 0.21
SRRM1-216ENST00000489130 SUSD4Q5VX71 490 aa16.37■□□□□ 0.21
SRRM1-216ENST00000489130 NECTIN2Q92692 538 aa16.37■□□□□ 0.21
SRRM1-216ENST00000489130 DDX21Q9NR30 783 aaKnown RBP eCLIP16.37■□□□□ 0.21
SRRM1-216ENST00000489130 CACNA1SQ13698 1873 aa16.36■□□□□ 0.21
SRRM1-216ENST00000489130 ZNF316A6NFI3 1004 aaPredicted RBP16.36■□□□□ 0.21
SRRM1-216ENST00000489130 GLTPD2A6NH11 291 aa16.36■□□□□ 0.21
SRRM1-216ENST00000489130 NTSR2O95665 410 aa16.36■□□□□ 0.21
SRRM1-216ENST00000489130 PARP10Q53GL7 1025 aa16.36■□□□□ 0.21
SRRM1-216ENST00000489130 COPS6Q7L5N1 327 aa16.36■□□□□ 0.21
SRRM1-216ENST00000489130 XAGE3Q8WTP9 111 aa16.36■□□□□ 0.21
SRRM1-216ENST00000489130 MBIPQ9NS73 344 aa16.36■□□□□ 0.21
SRRM1-216ENST00000489130 ALDH1B1P30837 517 aa16.35■□□□□ 0.21
SRRM1-216ENST00000489130 CALD1Q05682 793 aaKnown RBP16.35■□□□□ 0.21
SRRM1-216ENST00000489130 CCDC184Q52MB2 194 aa16.35■□□□□ 0.21
SRRM1-216ENST00000489130 CCDC93Q567U6 631 aa16.35■□□□□ 0.21
SRRM1-216ENST00000489130 HDGFL1Q5TGJ6 251 aa16.35■□□□□ 0.21
SRRM1-216ENST00000489130 PPP1R42Q7Z4L9 355 aa16.35■□□□□ 0.21
SRRM1-216ENST00000489130 RRAGCQ9HB90 399 aa16.35■□□□□ 0.21
SRRM1-216ENST00000489130 IFT57Q9NWB7 429 aa16.35■□□□□ 0.21
SRRM1-216ENST00000489130 CHPF2Q9P2E5 772 aa16.35■□□□□ 0.21
SRRM1-216ENST00000489130 HSP90AB3PQ58FF7 597 aa16.34■□□□□ 0.21
SRRM1-216ENST00000489130 RBM46Q8TBY0 533 aaKnown RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms