RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 ST5P78524 1137 aa18.53■□□□□ 0.56
BRCA1-218ENST00000489037 NCBP3Q53F19 620 aaKnown RBP18.53■□□□□ 0.56
BRCA1-218ENST00000489037 CNBD1Q8NA66 436 aa18.53■□□□□ 0.56
BRCA1-218ENST00000489037 NECTIN2Q92692 538 aa18.53■□□□□ 0.56
BRCA1-218ENST00000489037 KIAA1551Q9HCM1 1747 aa18.53■□□□□ 0.56
BRCA1-218ENST00000489037 NIP7Q9Y221 180 aaKnown RBP eCLIP18.53■□□□□ 0.56
BRCA1-218ENST00000489037 MAP3K15Q6ZN16 1313 aa18.52■□□□□ 0.56
BRCA1-218ENST00000489037 NBPF5PQ86XG9 351 aaPredicted RBP18.52■□□□□ 0.56
BRCA1-218ENST00000489037 CHMP4AQ9BY43 222 aa18.52■□□□□ 0.56
BRCA1-218ENST00000489037 PDZRN3Q9UPQ7 1066 aa18.52■□□□□ 0.56
BRCA1-218ENST00000489037 SENP3-EIF4A1A0A087X0R7 540 aa18.51■□□□□ 0.55
BRCA1-218ENST00000489037 H0YIN7 160 aa18.51■□□□□ 0.55
BRCA1-218ENST00000489037 PDE6BP35913 854 aa18.51■□□□□ 0.55
BRCA1-218ENST00000489037 KRT24Q2M2I5 525 aa18.51■□□□□ 0.55
BRCA1-218ENST00000489037 HDGFL1Q5TGJ6 251 aa18.51■□□□□ 0.55
BRCA1-218ENST00000489037 DUSP27Q5VZP5 1158 aa18.51■□□□□ 0.55
BRCA1-218ENST00000489037 WWC1Q8IX03 1113 aa18.51■□□□□ 0.55
BRCA1-218ENST00000489037 BRCA1P38398 1863 aaKnown RBP18.51■□□□□ 0.55
BRCA1-218ENST00000489037 GTF2E1P29083 439 aaPredicted RBP18.5■□□□□ 0.55
BRCA1-218ENST00000489037 CHRNA5P30532 468 aa18.5■□□□□ 0.55
BRCA1-218ENST00000489037 HLFQ16534 295 aa18.5■□□□□ 0.55
BRCA1-218ENST00000489037 DALRD3Q5D0E6 543 aaKnown RBP18.5■□□□□ 0.55
BRCA1-218ENST00000489037 PRR5LQ6MZQ0 368 aa18.5■□□□□ 0.55
BRCA1-218ENST00000489037 TPTE2Q6XPS3 522 aa18.5■□□□□ 0.55
BRCA1-218ENST00000489037 TTLL7Q6ZT98 887 aa18.5■□□□□ 0.55
BRCA1-218ENST00000489037 BRIP1Q9BX63 1249 aa18.5■□□□□ 0.55
BRCA1-218ENST00000489037 ZBTB3Q9H5J0 574 aa18.5■□□□□ 0.55
BRCA1-218ENST00000489037 DDX21Q9NR30 783 aaKnown RBP eCLIP18.5■□□□□ 0.55
BRCA1-218ENST00000489037 SALL2Q9Y467 1007 aaPredicted RBP18.5■□□□□ 0.55
BRCA1-218ENST00000489037 PDIA6Q15084 440 aa18.49■□□□□ 0.55
BRCA1-218ENST00000489037 C2CD5Q86YS7 1000 aa18.49■□□□□ 0.55
BRCA1-218ENST00000489037 DBF4Q9UBU7 674 aaPredicted RBP18.49■□□□□ 0.55
BRCA1-218ENST00000489037 ANXA1P04083 346 aa18.48■□□□□ 0.55
BRCA1-218ENST00000489037 KCNA3P22001 575 aa18.48■□□□□ 0.55
BRCA1-218ENST00000489037 AIMP1Q12904 312 aaKnown RBP18.48■□□□□ 0.55
BRCA1-218ENST00000489037 NYXQ9GZU5 481 aa18.48■□□□□ 0.55
BRCA1-218ENST00000489037 ARFGEF1Q9Y6D6 1849 aa18.48■□□□□ 0.55
BRCA1-218ENST00000489037 IL16Q14005 1332 aa18.48■□□□□ 0.55
BRCA1-218ENST00000489037 FAM177BA6PVY3 158 aa18.47■□□□□ 0.55
BRCA1-218ENST00000489037 GIGYF2Q6Y7W6 1299 aaKnown RBP18.47■□□□□ 0.55
BRCA1-218ENST00000489037 COPS6Q7L5N1 327 aa18.47■□□□□ 0.55
BRCA1-218ENST00000489037 CHPF2Q9P2E5 772 aa18.47■□□□□ 0.55
BRCA1-218ENST00000489037 ANKRD31Q8N7Z5 1873 aa18.46■□□□□ 0.55
BRCA1-218ENST00000489037 ELL2O00472 640 aaPredicted RBP18.46■□□□□ 0.55
BRCA1-218ENST00000489037 PROSER3Q2NL68 480 aa18.46■□□□□ 0.55
BRCA1-218ENST00000489037 HSP90AB3PQ58FF7 597 aa18.46■□□□□ 0.55
BRCA1-218ENST00000489037 ARHGAP27Q6ZUM4 889 aa18.46■□□□□ 0.55
BRCA1-218ENST00000489037 WDR63Q8IWG1 891 aa18.46■□□□□ 0.55
BRCA1-218ENST00000489037 CCDC24Q8N4L8 307 aa18.46■□□□□ 0.55
BRCA1-218ENST00000489037 XAGE3Q8WTP9 111 aa18.46■□□□□ 0.55
BRCA1-218ENST00000489037 ZNF622Q969S3 477 aaKnown RBP eCLIP18.46■□□□□ 0.555e-8■■■□□ 17.3
BRCA1-218ENST00000489037 HYPKQ9NX55 129 aa18.46■□□□□ 0.55
BRCA1-218ENST00000489037 DLEC1Q9Y238 1755 aa18.45■□□□□ 0.54
BRCA1-218ENST00000489037 TTLL6Q8N841 843 aa18.45■□□□□ 0.54
BRCA1-218ENST00000489037 ATP10DQ9P241 1426 aa18.45■□□□□ 0.54
BRCA1-218ENST00000489037 CCER2I3L3R5 266 aa18.44■□□□□ 0.54
BRCA1-218ENST00000489037 GPTP24298 496 aa18.44■□□□□ 0.54
BRCA1-218ENST00000489037 PARP10Q53GL7 1025 aa18.44■□□□□ 0.54
BRCA1-218ENST00000489037 CCDC30Q5VVM6 783 aa18.44■□□□□ 0.54
BRCA1-218ENST00000489037 LRP10Q7Z4F1 713 aa18.44■□□□□ 0.54
BRCA1-218ENST00000489037 PPP1R42Q7Z4L9 355 aa18.44■□□□□ 0.54
BRCA1-218ENST00000489037 C8orf58Q8NAV2 365 aa18.43■□□□□ 0.54
BRCA1-218ENST00000489037 TSR2Q969E8 191 aaKnown RBP18.43■□□□□ 0.54
BRCA1-218ENST00000489037 ZNF34Q8IZ26 560 aa18.42■□□□□ 0.54
BRCA1-218ENST00000489037 CNKSR1Q969H4 720 aa18.42■□□□□ 0.54
BRCA1-218ENST00000489037 UTRNP46939 3433 aa18.41■□□□□ 0.54
BRCA1-218ENST00000489037 ANKRD36CQ5JPF3 1778 aa18.41■□□□□ 0.54
BRCA1-218ENST00000489037 STYK1Q6J9G0 422 aa18.41■□□□□ 0.54
BRCA1-218ENST00000489037 ANKRD13DQ6ZTN6 518 aa18.41■□□□□ 0.54
BRCA1-218ENST00000489037 MASTLQ96GX5 879 aa18.41■□□□□ 0.54
BRCA1-218ENST00000489037 GOLGB1Q14789 3259 aaKnown RBP18.4■□□□□ 0.54
BRCA1-218ENST00000489037 CACNA1SQ13698 1873 aa18.4■□□□□ 0.54
BRCA1-218ENST00000489037 GOLGA2Q08379 1002 aa18.4■□□□□ 0.54
BRCA1-218ENST00000489037 TWISTNBQ3B726 338 aaPredicted RBP18.4■□□□□ 0.54
BRCA1-218ENST00000489037 PLBD2Q8NHP8 589 aa18.4■□□□□ 0.54
BRCA1-218ENST00000489037 STK31Q9BXU1 1019 aa18.4■□□□□ 0.54
BRCA1-218ENST00000489037 IBTKQ9P2D0 1353 aaPredicted RBP18.4■□□□□ 0.54
BRCA1-218ENST00000489037 CACNA1FO60840 1977 aa18.39■□□□□ 0.53
BRCA1-218ENST00000489037 SRGNP10124 158 aa18.39■□□□□ 0.53
BRCA1-218ENST00000489037 TCIRG1Q13488 830 aa18.39■□□□□ 0.53
BRCA1-218ENST00000489037 SUSD4Q5VX71 490 aa18.39■□□□□ 0.53
BRCA1-218ENST00000489037 DIEXFQ68CQ4 756 aaKnown RBP18.39■□□□□ 0.53
BRCA1-218ENST00000489037 ZNF784Q8NCA9 323 aaPredicted RBP18.39■□□□□ 0.53
BRCA1-218ENST00000489037 UTP14AQ9BVJ6 771 aaKnown RBP18.39■□□□□ 0.53
BRCA1-218ENST00000489037 MYH16Q9H6N6 1097 aa18.39■□□□□ 0.53
BRCA1-218ENST00000489037 COL11A2P13942 1736 aaPredicted RBP18.38■□□□□ 0.53
BRCA1-218ENST00000489037 DDX58O95786 925 aaKnown RBP18.38■□□□□ 0.53
BRCA1-218ENST00000489037 NPR1P16066 1061 aa18.38■□□□□ 0.53
BRCA1-218ENST00000489037 RIC3Q7Z5B4 369 aa18.38■□□□□ 0.53
BRCA1-218ENST00000489037 NUTM1Q86Y26 1132 aa18.38■□□□□ 0.53
BRCA1-218ENST00000489037 TSPYL6Q8N831 410 aa18.38■□□□□ 0.53
BRCA1-218ENST00000489037 UBN2Q6ZU65 1347 aa18.38■□□□□ 0.53
BRCA1-218ENST00000489037 ERFEQ4G0M1 354 aa18.37■□□□□ 0.53
BRCA1-218ENST00000489037 FANCIQ9NVI1 1328 aa18.37■□□□□ 0.53
BRCA1-218ENST00000489037 ALDH1B1P30837 517 aa18.36■□□□□ 0.53
BRCA1-218ENST00000489037 RNF123Q5XPI4 1314 aa18.36■□□□□ 0.53
BRCA1-218ENST00000489037 KLRG2A4D1S0 409 aaPredicted RBP18.35■□□□□ 0.53
BRCA1-218ENST00000489037 NTSR2O95665 410 aa18.35■□□□□ 0.53
BRCA1-218ENST00000489037 SOGA3Q5TF21 947 aa18.35■□□□□ 0.53
BRCA1-218ENST00000489037 NLRP10Q86W26 655 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms