RNA–Protein interactions for RNA: ENST00000488558.2

CUL4A-209, Transcript of cullin 4A, humanhuman

TSL 3 BASIC

Gene CUL4A, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-209ENST00000488558 ST5P78524 1137 aa30.36■■■□□ 2.45
CUL4A-209ENST00000488558 C9orf131Q5VYM1 1079 aa30.35■■■□□ 2.45
CUL4A-209ENST00000488558 NUP98P52948 1817 aa30.33■■■□□ 2.45
CUL4A-209ENST00000488558 NPHP1O15259 732 aa30.33■■■□□ 2.45
CUL4A-209ENST00000488558 CCDC146Q8IYE0 955 aa30.33■■■□□ 2.45
CUL4A-209ENST00000488558 NBPF5PQ86XG9 351 aaPredicted RBP30.32■■■□□ 2.44
CUL4A-209ENST00000488558 ERVV-1B6SEH8 477 aa30.31■■■□□ 2.44
CUL4A-209ENST00000488558 ADAMTS8Q9UP79 889 aa30.31■■■□□ 2.44
CUL4A-209ENST00000488558 NIP7Q9Y221 180 aaKnown RBP eCLIP30.31■■■□□ 2.44
CUL4A-209ENST00000488558 ZC3H4Q9UPT8 1303 aaKnown RBP30.3■■■□□ 2.44
CUL4A-209ENST00000488558 CCDC24Q8N4L8 307 aa30.3■■■□□ 2.44
CUL4A-209ENST00000488558 RNF181Q9P0P0 153 aa30.3■■■□□ 2.44
CUL4A-209ENST00000488558 RRP7AQ9Y3A4 280 aaKnown RBP30.3■■■□□ 2.44
CUL4A-209ENST00000488558 MAP3K15Q6ZN16 1313 aa30.29■■■□□ 2.44
CUL4A-209ENST00000488558 SENP3-EIF4A1A0A087X0R7 540 aa30.29■■■□□ 2.44
CUL4A-209ENST00000488558 KIF3CO14782 793 aa30.29■■■□□ 2.44
CUL4A-209ENST00000488558 STYK1Q6J9G0 422 aa30.29■■■□□ 2.44
CUL4A-209ENST00000488558 ZNF622Q969S3 477 aaKnown RBP eCLIP30.29■■■□□ 2.44
CUL4A-209ENST00000488558 CACNA1SQ13698 1873 aa30.28■■■□□ 2.44
CUL4A-209ENST00000488558 FER1L6Q2WGJ9 1857 aa30.28■■■□□ 2.44
CUL4A-209ENST00000488558 HLFQ16534 295 aa30.28■■■□□ 2.44
CUL4A-209ENST00000488558 TPTE2Q6XPS3 522 aa30.28■■■□□ 2.44
CUL4A-209ENST00000488558 KIF6Q6ZMV9 814 aa30.28■■■□□ 2.44
CUL4A-209ENST00000488558 TIAM2Q8IVF5 1701 aa30.27■■■□□ 2.44
CUL4A-209ENST00000488558 SRGNP10124 158 aa30.27■■■□□ 2.44
CUL4A-209ENST00000488558 CNKSR1Q969H4 720 aa30.27■■■□□ 2.44
CUL4A-209ENST00000488558 TRIM35Q9UPQ4 493 aa30.27■■■□□ 2.44
CUL4A-209ENST00000488558 RASSF7Q02833 373 aa30.26■■■□□ 2.43
CUL4A-209ENST00000488558 NEUROD2Q15784 382 aa30.26■■■□□ 2.43
CUL4A-209ENST00000488558 MASTLQ96GX5 879 aa30.26■■■□□ 2.43
CUL4A-209ENST00000488558 TNRC6CQ9HCJ0 1690 aaKnown RBP30.26■■■□□ 2.43
CUL4A-209ENST00000488558 IBTKQ9P2D0 1353 aaPredicted RBP30.26■■■□□ 2.43
CUL4A-209ENST00000488558 MYL6BP14649 208 aa30.25■■■□□ 2.43
CUL4A-209ENST00000488558 LMNB1P20700 586 aa30.25■■■□□ 2.43
CUL4A-209ENST00000488558 SLX4Q8IY92 1834 aa30.24■■■□□ 2.43
CUL4A-209ENST00000488558 KLRG2A4D1S0 409 aaPredicted RBP30.24■■■□□ 2.43
CUL4A-209ENST00000488558 CHL1O00533 1208 aa30.24■■■□□ 2.43
CUL4A-209ENST00000488558 NGEFQ8N5V2 710 aa30.24■■■□□ 2.43
CUL4A-209ENST00000488558 CCDC88AQ3V6T2 1871 aa30.24■■■□□ 2.43
CUL4A-209ENST00000488558 NFKBIEO00221 500 aa30.23■■■□□ 2.43
CUL4A-209ENST00000488558 TTLL7Q6ZT98 887 aa30.23■■■□□ 2.43
CUL4A-209ENST00000488558 KDM2BQ8NHM5 1336 aa30.22■■■□□ 2.43
CUL4A-209ENST00000488558 LRP10Q7Z4F1 713 aa30.22■■■□□ 2.43
CUL4A-209ENST00000488558 NYXQ9GZU5 481 aa30.22■■■□□ 2.43
CUL4A-209ENST00000488558 RIC1Q4ADV7 1423 aa30.22■■■□□ 2.43
CUL4A-209ENST00000488558 DICER1Q9UPY3 1922 aaKnown RBP30.21■■■□□ 2.43
CUL4A-209ENST00000488558 PDIA6Q15084 440 aa30.2■■■□□ 2.43
CUL4A-209ENST00000488558 SOGA3Q5TF21 947 aa30.2■■■□□ 2.43
CUL4A-209ENST00000488558 PRPF40BQ6NWY9 871 aaKnown RBP30.2■■■□□ 2.43
CUL4A-209ENST00000488558 LTBP3Q9NS15 1303 aa30.2■■■□□ 2.42
CUL4A-209ENST00000488558 C21orf2O43822 256 aa30.19■■■□□ 2.42
CUL4A-209ENST00000488558 NPR1P16066 1061 aa30.19■■■□□ 2.42
CUL4A-209ENST00000488558 PRELPP51888 382 aa30.19■■■□□ 2.42
CUL4A-209ENST00000488558 ZBTB3Q9H5J0 574 aa30.19■■■□□ 2.42
CUL4A-209ENST00000488558 NMRK2Q9NPI5 230 aa30.19■■■□□ 2.42
CUL4A-209ENST00000488558 ANKRD36CQ5JPF3 1778 aa30.18■■■□□ 2.42
CUL4A-209ENST00000488558 EIF2S2P20042 333 aaKnown RBP30.18■■■□□ 2.42
CUL4A-209ENST00000488558 GIGYF2Q6Y7W6 1299 aaKnown RBP30.18■■■□□ 2.42
CUL4A-209ENST00000488558 FAM177BA6PVY3 158 aa30.16■■■□□ 2.42
CUL4A-209ENST00000488558 TOMM70O94826 608 aa30.16■■■□□ 2.42
CUL4A-209ENST00000488558 HOXB7P09629 217 aa30.16■■■□□ 2.42
CUL4A-209ENST00000488558 GTF2E1P29083 439 aaPredicted RBP30.16■■■□□ 2.42
CUL4A-209ENST00000488558 ZNF34Q8IZ26 560 aa30.16■■■□□ 2.42
CUL4A-209ENST00000488558 UBN2Q6ZU65 1347 aa30.16■■■□□ 2.42
CUL4A-209ENST00000488558 ABCC12Q96J65 1359 aa30.15■■■□□ 2.42
CUL4A-209ENST00000488558 CFAP44Q96MT7 982 aa30.15■■■□□ 2.42
CUL4A-209ENST00000488558 PROSER3Q2NL68 480 aa30.14■■■□□ 2.42
CUL4A-209ENST00000488558 TAOK3Q9H2K8 898 aa30.14■■■□□ 2.42
CUL4A-209ENST00000488558 HSPA6P17066 643 aa30.13■■■□□ 2.41
CUL4A-209ENST00000488558 CRY2Q49AN0 593 aa30.13■■■□□ 2.41
CUL4A-209ENST00000488558 ZNF219Q9P2Y4 722 aaPredicted RBP30.13■■■□□ 2.41
CUL4A-209ENST00000488558 LAS1LQ9Y4W2 734 aaKnown RBP30.13■■■□□ 2.41
CUL4A-209ENST00000488558 PARP10Q53GL7 1025 aa30.12■■■□□ 2.41
CUL4A-209ENST00000488558 C7orf43Q8WVR3 580 aa30.12■■■□□ 2.41
CUL4A-209ENST00000488558 DDX21Q9NR30 783 aaKnown RBP eCLIP30.12■■■□□ 2.41
CUL4A-209ENST00000488558 APAF1O14727 1248 aa30.11■■■□□ 2.41
CUL4A-209ENST00000488558 GPTP24298 496 aa30.11■■■□□ 2.41
CUL4A-209ENST00000488558 CALD1Q05682 793 aaKnown RBP30.11■■■□□ 2.41
CUL4A-209ENST00000488558 GLTPD2A6NH11 291 aa30.1■■■□□ 2.41
CUL4A-209ENST00000488558 ALDH1B1P30837 517 aa30.1■■■□□ 2.41
CUL4A-209ENST00000488558 KRT24Q2M2I5 525 aa30.1■■■□□ 2.41
CUL4A-209ENST00000488558 ERFEQ4G0M1 354 aa30.1■■■□□ 2.41
CUL4A-209ENST00000488558 NUTM1Q86Y26 1132 aa30.1■■■□□ 2.41
CUL4A-209ENST00000488558 NTSR2O95665 410 aa30.09■■■□□ 2.41
CUL4A-209ENST00000488558 ANXA1P04083 346 aa30.09■■■□□ 2.41
CUL4A-209ENST00000488558 ZNF853P0CG23 659 aa30.09■■■□□ 2.41
CUL4A-209ENST00000488558 CCDC93Q567U6 631 aa30.09■■■□□ 2.41
CUL4A-209ENST00000488558 SUSD4Q5VX71 490 aa30.09■■■□□ 2.41
CUL4A-209ENST00000488558 PPP1R42Q7Z4L9 355 aa30.09■■■□□ 2.41
CUL4A-209ENST00000488558 RBM46Q8TBY0 533 aaKnown RBP30.09■■■□□ 2.41
CUL4A-209ENST00000488558 RNF123Q5XPI4 1314 aa30.08■■■□□ 2.41
CUL4A-209ENST00000488558 HSP90AB3PQ58FF7 597 aa30.08■■■□□ 2.41
CUL4A-209ENST00000488558 IFT57Q9NWB7 429 aa30.08■■■□□ 2.41
CUL4A-209ENST00000488558 WDR90Q96KV7 1748 aa30.08■■■□□ 2.41
CUL4A-209ENST00000488558 ZNF316A6NFI3 1004 aaPredicted RBP30.07■■■□□ 2.4
CUL4A-209ENST00000488558 HDGFL1Q5TGJ6 251 aa30.07■■■□□ 2.4
CUL4A-209ENST00000488558 COPS6Q7L5N1 327 aa30.07■■■□□ 2.4
CUL4A-209ENST00000488558 C16orf71Q8IYS4 520 aaPredicted RBP30.07■■■□□ 2.4
CUL4A-209ENST00000488558 NECTIN2Q92692 538 aa30.07■■■□□ 2.4
CUL4A-209ENST00000488558 MBIPQ9NS73 344 aa30.07■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms