RNA–Protein interactions for RNA: ENST00000488106.1

RHBDD3-205, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 640 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-205ENST00000488106 DPEP1P16444 411 aa30.8■■■□□ 2.52
RHBDD3-205ENST00000488106 ANXA1P04083 346 aa30.79■■■□□ 2.52
RHBDD3-205ENST00000488106 KIF6Q6ZMV9 814 aa30.79■■■□□ 2.52
RHBDD3-205ENST00000488106 SETDB2Q96T68 719 aa30.79■■■□□ 2.52
RHBDD3-205ENST00000488106 SALL2Q9Y467 1007 aaPredicted RBP30.79■■■□□ 2.52
RHBDD3-205ENST00000488106 CCDC27Q2M243 656 aa30.78■■■□□ 2.52
RHBDD3-205ENST00000488106 PROSER3Q2NL68 480 aa30.78■■■□□ 2.52
RHBDD3-205ENST00000488106 TTLL7Q6ZT98 887 aa30.78■■■□□ 2.52
RHBDD3-205ENST00000488106 WWC1Q8IX03 1113 aa30.78■■■□□ 2.52
RHBDD3-205ENST00000488106 CLEC4GQ6UXB4 293 aa30.77■■■□□ 2.52
RHBDD3-205ENST00000488106 YY1P25490 414 aa30.76■■■□□ 2.51
RHBDD3-205ENST00000488106 PDIA6Q15084 440 aa30.76■■■□□ 2.51
RHBDD3-205ENST00000488106 HLFQ16534 295 aa30.76■■■□□ 2.51
RHBDD3-205ENST00000488106 ARFGEF2Q9Y6D5 1785 aa30.76■■■□□ 2.51
RHBDD3-205ENST00000488106 MAP3K15Q6ZN16 1313 aa30.75■■■□□ 2.51
RHBDD3-205ENST00000488106 NPHP1O15259 732 aa30.75■■■□□ 2.51
RHBDD3-205ENST00000488106 GRIN3BO60391 1043 aa30.75■■■□□ 2.51
RHBDD3-205ENST00000488106 CHRNA5P30532 468 aa30.75■■■□□ 2.51
RHBDD3-205ENST00000488106 HDGFL1Q5TGJ6 251 aa30.75■■■□□ 2.51
RHBDD3-205ENST00000488106 DUSP27Q5VZP5 1158 aa30.75■■■□□ 2.51
RHBDD3-205ENST00000488106 ZBTB3Q9H5J0 574 aa30.75■■■□□ 2.51
RHBDD3-205ENST00000488106 CCDC24Q8N4L8 307 aa30.74■■■□□ 2.51
RHBDD3-205ENST00000488106 HOXB7P09629 217 aa30.73■■■□□ 2.51
RHBDD3-205ENST00000488106 PRR5LQ6MZQ0 368 aa30.73■■■□□ 2.51
RHBDD3-205ENST00000488106 CNBD1Q8NA66 436 aa30.73■■■□□ 2.51
RHBDD3-205ENST00000488106 CHPF2Q9P2E5 772 aa30.73■■■□□ 2.51
RHBDD3-205ENST00000488106 NIP7Q9Y221 180 aaKnown RBP eCLIP30.73■■■□□ 2.51
RHBDD3-205ENST00000488106 RGL2O15211 777 aa30.72■■■□□ 2.51
RHBDD3-205ENST00000488106 LRP10Q7Z4F1 713 aa30.72■■■□□ 2.51
RHBDD3-205ENST00000488106 TSR2Q969E8 191 aaKnown RBP30.72■■■□□ 2.51
RHBDD3-205ENST00000488106 BCS1LQ9Y276 419 aa30.72■■■□□ 2.51
RHBDD3-205ENST00000488106 ELL2O00472 640 aaPredicted RBP30.71■■■□□ 2.51
RHBDD3-205ENST00000488106 KCNA3P22001 575 aa30.71■■■□□ 2.51
RHBDD3-205ENST00000488106 CACNA1FO60840 1977 aa30.71■■■□□ 2.51
RHBDD3-205ENST00000488106 ATP10DQ9P241 1426 aa30.71■■■□□ 2.51
RHBDD3-205ENST00000488106 TNRC6CQ9HCJ0 1690 aaKnown RBP30.71■■■□□ 2.51
RHBDD3-205ENST00000488106 ERVV-1B6SEH8 477 aa30.7■■■□□ 2.51
RHBDD3-205ENST00000488106 NBPF5PQ86XG9 351 aaPredicted RBP30.7■■■□□ 2.51
RHBDD3-205ENST00000488106 DDX21Q9NR30 783 aaKnown RBP eCLIP30.7■■■□□ 2.51
RHBDD3-205ENST00000488106 FAM177BA6PVY3 158 aa30.69■■■□□ 2.5
RHBDD3-205ENST00000488106 CCDC88AQ3V6T2 1871 aa30.69■■■□□ 2.5
RHBDD3-205ENST00000488106 ST5P78524 1137 aa30.68■■■□□ 2.5
RHBDD3-205ENST00000488106 AIMP1Q12904 312 aaKnown RBP30.68■■■□□ 2.5
RHBDD3-205ENST00000488106 NCBP3Q53F19 620 aaKnown RBP30.68■■■□□ 2.5
RHBDD3-205ENST00000488106 PIM2Q9P1W9 311 aa30.68■■■□□ 2.5
RHBDD3-205ENST00000488106 C2CD5Q86YS7 1000 aa30.67■■■□□ 2.5
RHBDD3-205ENST00000488106 C8orf58Q8NAV2 365 aa30.67■■■□□ 2.5
RHBDD3-205ENST00000488106 XAGE3Q8WTP9 111 aa30.67■■■□□ 2.5
RHBDD3-205ENST00000488106 IL16Q14005 1332 aa30.67■■■□□ 2.5
RHBDD3-205ENST00000488106 SBF1O95248 1867 aa30.66■■■□□ 2.5
RHBDD3-205ENST00000488106 COPS6Q7L5N1 327 aa30.66■■■□□ 2.5
RHBDD3-205ENST00000488106 GPTP24298 496 aa30.65■■■□□ 2.5
RHBDD3-205ENST00000488106 DBF4Q9UBU7 674 aaPredicted RBP30.65■■■□□ 2.5
RHBDD3-205ENST00000488106 DALRD3Q5D0E6 543 aaKnown RBP30.64■■■□□ 2.5
RHBDD3-205ENST00000488106 BRIP1Q9BX63 1249 aa30.64■■■□□ 2.5
RHBDD3-205ENST00000488106 LAMB2P55268 1798 aa30.64■■■□□ 2.49
RHBDD3-205ENST00000488106 SLX4Q8IY92 1834 aa30.63■■■□□ 2.49
RHBDD3-205ENST00000488106 H0YIN7 160 aa30.63■■■□□ 2.49
RHBDD3-205ENST00000488106 GIGYF2Q6Y7W6 1299 aaKnown RBP30.63■■■□□ 2.49
RHBDD3-205ENST00000488106 CCER2I3L3R5 266 aa30.62■■■□□ 2.49
RHBDD3-205ENST00000488106 PDE6BP35913 854 aa30.62■■■□□ 2.49
RHBDD3-205ENST00000488106 TSPYL6Q8N831 410 aa30.62■■■□□ 2.49
RHBDD3-205ENST00000488106 UBN2Q6ZU65 1347 aa30.62■■■□□ 2.49
RHBDD3-205ENST00000488106 DIEXFQ68CQ4 756 aaKnown RBP30.61■■■□□ 2.49
RHBDD3-205ENST00000488106 TPTE2Q6XPS3 522 aa30.61■■■□□ 2.49
RHBDD3-205ENST00000488106 FANCIQ9NVI1 1328 aa30.61■■■□□ 2.49
RHBDD3-205ENST00000488106 WDR63Q8IWG1 891 aa30.6■■■□□ 2.49
RHBDD3-205ENST00000488106 HYPKQ9NX55 129 aa30.59■■■□□ 2.49
RHBDD3-205ENST00000488106 ABCC12Q96J65 1359 aa30.58■■■□□ 2.49
RHBDD3-205ENST00000488106 GTF2E1P29083 439 aaPredicted RBP30.58■■■□□ 2.49
RHBDD3-205ENST00000488106 ZNF34Q8IZ26 560 aa30.58■■■□□ 2.49
RHBDD3-205ENST00000488106 ZNF622Q969S3 477 aaKnown RBP eCLIP30.58■■■□□ 2.49
RHBDD3-205ENST00000488106 FER1L6Q2WGJ9 1857 aa30.57■■■□□ 2.48
RHBDD3-205ENST00000488106 IBTKQ9P2D0 1353 aaPredicted RBP30.57■■■□□ 2.48
RHBDD3-205ENST00000488106 NUTM1Q86Y26 1132 aa30.57■■■□□ 2.48
RHBDD3-205ENST00000488106 NYXQ9GZU5 481 aa30.57■■■□□ 2.48
RHBDD3-205ENST00000488106 ARHGAP27Q6ZUM4 889 aa30.56■■■□□ 2.48
RHBDD3-205ENST00000488106 PDZRN3Q9UPQ7 1066 aa30.56■■■□□ 2.48
RHBDD3-205ENST00000488106 TWISTNBQ3B726 338 aaPredicted RBP30.55■■■□□ 2.48
RHBDD3-205ENST00000488106 CCDC30Q5VVM6 783 aa30.55■■■□□ 2.48
RHBDD3-205ENST00000488106 SUSD4Q5VX71 490 aa30.55■■■□□ 2.48
RHBDD3-205ENST00000488106 TTLL6Q8N841 843 aa30.55■■■□□ 2.48
RHBDD3-205ENST00000488106 DDX60Q8IY21 1712 aaKnown RBP30.55■■■□□ 2.48
RHBDD3-205ENST00000488106 PLBD2Q8NHP8 589 aa30.54■■■□□ 2.48
RHBDD3-205ENST00000488106 ERFEQ4G0M1 354 aa30.53■■■□□ 2.48
RHBDD3-205ENST00000488106 HSP90AB3PQ58FF7 597 aa30.53■■■□□ 2.48
RHBDD3-205ENST00000488106 PHAXQ9H814 394 aaKnown RBP30.53■■■□□ 2.48
RHBDD3-205ENST00000488106 SPINK5Q9NQ38 1064 aaPredicted RBP30.53■■■□□ 2.48
RHBDD3-205ENST00000488106 TCERG1O14776 1098 aaKnown RBP30.52■■■□□ 2.48
RHBDD3-205ENST00000488106 NTSR2O95665 410 aa30.52■■■□□ 2.48
RHBDD3-205ENST00000488106 PARP10Q53GL7 1025 aa30.52■■■□□ 2.48
RHBDD3-205ENST00000488106 ANKRD13DQ6ZTN6 518 aa30.52■■■□□ 2.48
RHBDD3-205ENST00000488106 TIAM2Q8IVF5 1701 aa30.51■■■□□ 2.47
RHBDD3-205ENST00000488106 SRGNP10124 158 aa30.51■■■□□ 2.47
RHBDD3-205ENST00000488106 PPP1R42Q7Z4L9 355 aa30.51■■■□□ 2.47
RHBDD3-205ENST00000488106 CHMP4AQ9BY43 222 aa30.51■■■□□ 2.47
RHBDD3-205ENST00000488106 DICER1Q9UPY3 1922 aaKnown RBP30.51■■■□□ 2.47
RHBDD3-205ENST00000488106 GOLGA2Q08379 1002 aa30.5■■■□□ 2.47
RHBDD3-205ENST00000488106 ZNF521Q96K83 1311 aa30.49■■■□□ 2.47
RHBDD3-205ENST00000488106 TAF1P21675 1872 aa30.49■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms