RNA–Protein interactions for RNA: ENST00000487721.1

SFXN3-206, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-206ENST00000487721 ZNF853P0CG23 659 aa15.82■□□□□ 0.12
SFXN3-206ENST00000487721 MYL6BP14649 208 aa15.82■□□□□ 0.12
SFXN3-206ENST00000487721 DDR1Q08345 913 aa15.82■□□□□ 0.12
SFXN3-206ENST00000487721 NFIXQ14938 502 aa15.82■□□□□ 0.12
SFXN3-206ENST00000487721 DALRD3Q5D0E6 543 aaKnown RBP15.82■□□□□ 0.12
SFXN3-206ENST00000487721 BICDL1Q6ZP65 573 aa15.82■□□□□ 0.12
SFXN3-206ENST00000487721 WWC1Q8IX03 1113 aa15.82■□□□□ 0.12
SFXN3-206ENST00000487721 BCL2L12Q9HB09 334 aa15.82■□□□□ 0.12
SFXN3-206ENST00000487721 MBIPQ9NS73 344 aa15.82■□□□□ 0.12
SFXN3-206ENST00000487721 POLRMTO00411 1230 aaKnown RBP15.81■□□□□ 0.12
SFXN3-206ENST00000487721 SERPINB2P05120 415 aa15.81■□□□□ 0.12
SFXN3-206ENST00000487721 C9orf131Q5VYM1 1079 aa15.81■□□□□ 0.12
SFXN3-206ENST00000487721 SALL2Q9Y467 1007 aaPredicted RBP15.81■□□□□ 0.12
SFXN3-206ENST00000487721 MYH14Q7Z406 1995 aaKnown RBP15.8■□□□□ 0.12
SFXN3-206ENST00000487721 IL16Q14005 1332 aa15.8■□□□□ 0.12
SFXN3-206ENST00000487721 CHRNA5P30532 468 aa15.8■□□□□ 0.12
SFXN3-206ENST00000487721 HDGFL1Q5TGJ6 251 aa15.8■□□□□ 0.12
SFXN3-206ENST00000487721 NMRK2Q9NPI5 230 aa15.8■□□□□ 0.12
SFXN3-206ENST00000487721 KIF13BQ9NQT8 1826 aa15.8■□□□□ 0.12
SFXN3-206ENST00000487721 N4BP2Q86UW6 1770 aaPredicted RBP15.8■□□□□ 0.12
SFXN3-206ENST00000487721 ERVV-1B6SEH8 477 aa15.79■□□□□ 0.12
SFXN3-206ENST00000487721 APLP1P51693 650 aa15.79■□□□□ 0.12
SFXN3-206ENST00000487721 DUSP27Q5VZP5 1158 aa15.79■□□□□ 0.12
SFXN3-206ENST00000487721 TBC1D9BQ66K14 1250 aa15.79■□□□□ 0.12
SFXN3-206ENST00000487721 WDR63Q8IWG1 891 aa15.79■□□□□ 0.12
SFXN3-206ENST00000487721 NECTIN2Q92692 538 aa15.79■□□□□ 0.12
SFXN3-206ENST00000487721 C4AP0C0L4 1744 aa15.79■□□□□ 0.12
SFXN3-206ENST00000487721 CARMIL3Q8ND23 1372 aa15.78■□□□□ 0.12
SFXN3-206ENST00000487721 KIAA1551Q9HCM1 1747 aa15.77■□□□□ 0.12
SFXN3-206ENST00000487721 KRT24Q2M2I5 525 aa15.77■□□□□ 0.12
SFXN3-206ENST00000487721 DDX21Q9NR30 783 aaKnown RBP eCLIP15.77■□□□□ 0.12
SFXN3-206ENST00000487721 DBF4Q9UBU7 674 aaPredicted RBP15.77■□□□□ 0.12
SFXN3-206ENST00000487721 NIP7Q9Y221 180 aaKnown RBP eCLIP15.77■□□□□ 0.12
SFXN3-206ENST00000487721 KDM3BQ7LBC6 1761 aa15.77■□□□□ 0.11
SFXN3-206ENST00000487721 MAP3K15Q6ZN16 1313 aa15.76■□□□□ 0.11
SFXN3-206ENST00000487721 ST5P78524 1137 aa15.76■□□□□ 0.11
SFXN3-206ENST00000487721 NBPF5PQ86XG9 351 aaPredicted RBP15.76■□□□□ 0.11
SFXN3-206ENST00000487721 CNBD1Q8NA66 436 aa15.76■□□□□ 0.11
SFXN3-206ENST00000487721 RNF181Q9P0P0 153 aa15.76■□□□□ 0.11
SFXN3-206ENST00000487721 PDZRN3Q9UPQ7 1066 aa15.76■□□□□ 0.11
SFXN3-206ENST00000487721 ELL2O00472 640 aaPredicted RBP15.75■□□□□ 0.11
SFXN3-206ENST00000487721 GTF2E1P29083 439 aaPredicted RBP15.75■□□□□ 0.11
SFXN3-206ENST00000487721 PDIA6Q15084 440 aa15.75■□□□□ 0.11
SFXN3-206ENST00000487721 TPTE2Q6XPS3 522 aa15.75■□□□□ 0.11
SFXN3-206ENST00000487721 TTLL7Q6ZT98 887 aa15.75■□□□□ 0.11
SFXN3-206ENST00000487721 C16orf71Q8IYS4 520 aaPredicted RBP15.75■□□□□ 0.11
SFXN3-206ENST00000487721 DNAJC5GQ8N7S2 189 aa15.75■□□□□ 0.11
SFXN3-206ENST00000487721 ZBTB3Q9H5J0 574 aa15.75■□□□□ 0.11
SFXN3-206ENST00000487721 HYPKQ9NX55 129 aa15.75■□□□□ 0.11
SFXN3-206ENST00000487721 PDE6BP35913 854 aa15.74■□□□□ 0.11
SFXN3-206ENST00000487721 AIMP1Q12904 312 aaKnown RBP15.74■□□□□ 0.11
SFXN3-206ENST00000487721 HLFQ16534 295 aa15.74■□□□□ 0.11
SFXN3-206ENST00000487721 CCDC30Q5VVM6 783 aa15.74■□□□□ 0.11
SFXN3-206ENST00000487721 COPS6Q7L5N1 327 aa15.74■□□□□ 0.11
SFXN3-206ENST00000487721 RBM46Q8TBY0 533 aaKnown RBP15.74■□□□□ 0.11
SFXN3-206ENST00000487721 TSR2Q969E8 191 aaKnown RBP15.74■□□□□ 0.11
SFXN3-206ENST00000487721 NYXQ9GZU5 481 aa15.74■□□□□ 0.11
SFXN3-206ENST00000487721 MYH16Q9H6N6 1097 aa15.74■□□□□ 0.11
SFXN3-206ENST00000487721 CHPF2Q9P2E5 772 aa15.74■□□□□ 0.11
SFXN3-206ENST00000487721 KDM2BQ8NHM5 1336 aa15.73■□□□□ 0.11
SFXN3-206ENST00000487721 H0YIN7 160 aa15.73■□□□□ 0.11
SFXN3-206ENST00000487721 ANXA1P04083 346 aa15.73■□□□□ 0.11
SFXN3-206ENST00000487721 GOLGA2Q08379 1002 aa15.73■□□□□ 0.11
SFXN3-206ENST00000487721 PROSER3Q2NL68 480 aa15.73■□□□□ 0.11
SFXN3-206ENST00000487721 HSP90AB3PQ58FF7 597 aa15.73■□□□□ 0.11
SFXN3-206ENST00000487721 C8orf58Q8NAV2 365 aa15.73■□□□□ 0.11
SFXN3-206ENST00000487721 XAGE3Q8WTP9 111 aa15.73■□□□□ 0.11
SFXN3-206ENST00000487721 BRIP1Q9BX63 1249 aa15.73■□□□□ 0.11
SFXN3-206ENST00000487721 RRAGCQ9HB90 399 aa15.73■□□□□ 0.11
SFXN3-206ENST00000487721 PRR5LQ6MZQ0 368 aa15.72■□□□□ 0.11
SFXN3-206ENST00000487721 GIGYF2Q6Y7W6 1299 aaKnown RBP15.72■□□□□ 0.11
SFXN3-206ENST00000487721 C2CD5Q86YS7 1000 aa15.72■□□□□ 0.11
SFXN3-206ENST00000487721 STK31Q9BXU1 1019 aa15.72■□□□□ 0.11
SFXN3-206ENST00000487721 PARP10Q53GL7 1025 aa15.71■□□□□ 0.11
SFXN3-206ENST00000487721 FAM177BA6PVY3 158 aa15.7■□□□□ 0.1
SFXN3-206ENST00000487721 FSTL1Q12841 308 aa15.7■□□□□ 0.1
SFXN3-206ENST00000487721 TWISTNBQ3B726 338 aaPredicted RBP15.7■□□□□ 0.1
SFXN3-206ENST00000487721 ANKRD13DQ6ZTN6 518 aa15.7■□□□□ 0.1
SFXN3-206ENST00000487721 LRP10Q7Z4F1 713 aa15.7■□□□□ 0.1
SFXN3-206ENST00000487721 PPP1R42Q7Z4L9 355 aa15.7■□□□□ 0.1
SFXN3-206ENST00000487721 TTLL6Q8N841 843 aa15.7■□□□□ 0.1
SFXN3-206ENST00000487721 LAMB4A4D0S4 1761 aa15.7■□□□□ 0.1
SFXN3-206ENST00000487721 FANCIQ9NVI1 1328 aa15.69■□□□□ 0.1
SFXN3-206ENST00000487721 DDX58O95786 925 aaKnown RBP15.69■□□□□ 0.1
SFXN3-206ENST00000487721 GPTP24298 496 aa15.69■□□□□ 0.1
SFXN3-206ENST00000487721 RASSF7Q02833 373 aa15.69■□□□□ 0.1
SFXN3-206ENST00000487721 BRCA1P38398 1863 aaKnown RBP15.69■□□□□ 0.1
SFXN3-206ENST00000487721 LMNB1P20700 586 aa15.68■□□□□ 0.1
SFXN3-206ENST00000487721 ZNF34Q8IZ26 560 aa15.68■□□□□ 0.1
SFXN3-206ENST00000487721 CCDC24Q8N4L8 307 aa15.68■□□□□ 0.1
SFXN3-206ENST00000487721 PLBD2Q8NHP8 589 aa15.68■□□□□ 0.1
SFXN3-206ENST00000487721 ZNF622Q969S3 477 aaKnown RBP eCLIP15.68■□□□□ 0.1
SFXN3-206ENST00000487721 SCN7AQ01118 1682 aa15.67■□□□□ 0.1
SFXN3-206ENST00000487721 TCIRG1Q13488 830 aa15.67■□□□□ 0.1
SFXN3-206ENST00000487721 RIC3Q7Z5B4 369 aa15.67■□□□□ 0.1
SFXN3-206ENST00000487721 TSPYL6Q8N831 410 aa15.67■□□□□ 0.1
SFXN3-206ENST00000487721 ARFGEF1Q9Y6D6 1849 aa15.66■□□□□ 0.1
SFXN3-206ENST00000487721 E9PSI1 815 aa15.66■□□□□ 0.1
SFXN3-206ENST00000487721 PRELPP51888 382 aa15.66■□□□□ 0.1
SFXN3-206ENST00000487721 HTRA3P83110 453 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms