RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 ARFGEF2Q9Y6D5 1785 aa13.29□□□□□ -0.28
NEK4-204ENST00000487068 ARFGEF1Q9Y6D6 1849 aa13.29□□□□□ -0.28
NEK4-204ENST00000487068 GNAI1P63096 354 aa13.28□□□□□ -0.28
NEK4-204ENST00000487068 NECTIN2Q92692 538 aa13.28□□□□□ -0.28
NEK4-204ENST00000487068 WWC3Q9ULE0 1092 aa13.28□□□□□ -0.28
NEK4-204ENST00000487068 C10orf71Q711Q0 1435 aa13.28□□□□□ -0.28
NEK4-204ENST00000487068 DIEXFQ68CQ4 756 aaKnown RBP13.27□□□□□ -0.29
NEK4-204ENST00000487068 CFAP44Q96MT7 982 aa13.27□□□□□ -0.29
NEK4-204ENST00000487068 MBIPQ9NS73 344 aa13.27□□□□□ -0.29
NEK4-204ENST00000487068 ZNF652Q9Y2D9 606 aa13.27□□□□□ -0.29
NEK4-204ENST00000487068 COL11A2P13942 1736 aaPredicted RBP13.27□□□□□ -0.29
NEK4-204ENST00000487068 DDR1Q08345 913 aa13.26□□□□□ -0.29
NEK4-204ENST00000487068 KRT24Q2M2I5 525 aa13.26□□□□□ -0.29
NEK4-204ENST00000487068 KIF6Q6ZMV9 814 aa13.26□□□□□ -0.29
NEK4-204ENST00000487068 IFT57Q9NWB7 429 aa13.26□□□□□ -0.29
NEK4-204ENST00000487068 CARMIL3Q8ND23 1372 aa13.25□□□□□ -0.29
NEK4-204ENST00000487068 NBPF26B4DH59 902 aa13.25□□□□□ -0.29
NEK4-204ENST00000487068 CHL1O00533 1208 aa13.25□□□□□ -0.29
NEK4-204ENST00000487068 NFIXQ14938 502 aa13.25□□□□□ -0.29
NEK4-204ENST00000487068 NBPF10Q6P3W6 841 aaKnown RBP13.25□□□□□ -0.29
NEK4-204ENST00000487068 NBPF15Q8N660 670 aa13.25□□□□□ -0.29
NEK4-204ENST00000487068 PXDNLA1KZ92 1463 aa13.24□□□□□ -0.29
NEK4-204ENST00000487068 ERBB4Q15303 1308 aa13.24□□□□□ -0.29
NEK4-204ENST00000487068 POLRMTO00411 1230 aaKnown RBP13.24□□□□□ -0.29
NEK4-204ENST00000487068 CAMTA2O94983 1202 aa13.24□□□□□ -0.29
NEK4-204ENST00000487068 HDGFL1Q5TGJ6 251 aa13.24□□□□□ -0.29
NEK4-204ENST00000487068 TBC1D9BQ66K14 1250 aa13.24□□□□□ -0.29
NEK4-204ENST00000487068 BCL2L12Q9HB09 334 aa13.24□□□□□ -0.29
NEK4-204ENST00000487068 CCDC88AQ3V6T2 1871 aa13.24□□□□□ -0.29
NEK4-204ENST00000487068 ELL2O00472 640 aaPredicted RBP13.23□□□□□ -0.29
NEK4-204ENST00000487068 KIF3CO14782 793 aa13.23□□□□□ -0.29
NEK4-204ENST00000487068 SERPINB2P05120 415 aa13.23□□□□□ -0.29
NEK4-204ENST00000487068 CCDC27Q2M243 656 aa13.23□□□□□ -0.29
NEK4-204ENST00000487068 WWC1Q8IX03 1113 aa13.23□□□□□ -0.29
NEK4-204ENST00000487068 ZBTB3Q9H5J0 574 aa13.23□□□□□ -0.29
NEK4-204ENST00000487068 ANXA1P04083 346 aa13.22□□□□□ -0.29
NEK4-204ENST00000487068 DUSP27Q5VZP5 1158 aa13.22□□□□□ -0.29
NEK4-204ENST00000487068 TSR2Q969E8 191 aaKnown RBP13.22□□□□□ -0.29
NEK4-204ENST00000487068 SETDB2Q96T68 719 aa13.22□□□□□ -0.29
NEK4-204ENST00000487068 LAMB2P55268 1798 aa13.22□□□□□ -0.29
NEK4-204ENST00000487068 MAP3K15Q6ZN16 1313 aa13.21□□□□□ -0.29
NEK4-204ENST00000487068 FAM177BA6PVY3 158 aa13.21□□□□□ -0.29
NEK4-204ENST00000487068 CCER2I3L3R5 266 aa13.21□□□□□ -0.29
NEK4-204ENST00000487068 HOXB7P09629 217 aa13.21□□□□□ -0.29
NEK4-204ENST00000487068 TM4SF1P30408 202 aa13.21□□□□□ -0.29
NEK4-204ENST00000487068 AIMP1Q12904 312 aaKnown RBP13.21□□□□□ -0.29
NEK4-204ENST00000487068 CNBD1Q8NA66 436 aa13.21□□□□□ -0.29
NEK4-204ENST00000487068 CHPF2Q9P2E5 772 aa13.21□□□□□ -0.29
NEK4-204ENST00000487068 NIP7Q9Y221 180 aaKnown RBP eCLIP13.21□□□□□ -0.29
NEK4-204ENST00000487068 TNRC6CQ9HCJ0 1690 aaKnown RBP13.21□□□□□ -0.3
NEK4-204ENST00000487068 A0A0G2JLW4 131 aa13.2□□□□□ -0.3
NEK4-204ENST00000487068 ZNF853P0CG23 659 aa13.2□□□□□ -0.3
NEK4-204ENST00000487068 APLP1P51693 650 aa13.2□□□□□ -0.3
NEK4-204ENST00000487068 TGFB2P61812 414 aa13.2□□□□□ -0.3
NEK4-204ENST00000487068 ST5P78524 1137 aa13.2□□□□□ -0.3
NEK4-204ENST00000487068 PROSER3Q2NL68 480 aa13.2□□□□□ -0.3
NEK4-204ENST00000487068 TTLL7Q6ZT98 887 aa13.2□□□□□ -0.3
NEK4-204ENST00000487068 NBPF5PQ86XG9 351 aaPredicted RBP13.2□□□□□ -0.3
NEK4-204ENST00000487068 IL16Q14005 1332 aa13.19□□□□□ -0.3
NEK4-204ENST00000487068 GTF2E1P29083 439 aaPredicted RBP13.19□□□□□ -0.3
NEK4-204ENST00000487068 CLEC4GQ6UXB4 293 aa13.19□□□□□ -0.3
NEK4-204ENST00000487068 CCDC24Q8N4L8 307 aa13.19□□□□□ -0.3
NEK4-204ENST00000487068 DDX21Q9NR30 783 aaKnown RBP eCLIP13.19□□□□□ -0.3
NEK4-204ENST00000487068 DBF4Q9UBU7 674 aaPredicted RBP13.19□□□□□ -0.3
NEK4-204ENST00000487068 FANCIQ9NVI1 1328 aa13.18□□□□□ -0.3
NEK4-204ENST00000487068 MYH3P11055 1940 aa13.18□□□□□ -0.3
NEK4-204ENST00000487068 DPEP1P16444 411 aa13.18□□□□□ -0.3
NEK4-204ENST00000487068 GPTP24298 496 aa13.18□□□□□ -0.3
NEK4-204ENST00000487068 HLFQ16534 295 aa13.18□□□□□ -0.3
NEK4-204ENST00000487068 XAGE3Q8WTP9 111 aa13.18□□□□□ -0.3
NEK4-204ENST00000487068 BCS1LQ9Y276 419 aa13.18□□□□□ -0.3
NEK4-204ENST00000487068 SBF1O95248 1867 aa13.17□□□□□ -0.3
NEK4-204ENST00000487068 ERVV-1B6SEH8 477 aa13.17□□□□□ -0.3
NEK4-204ENST00000487068 TOMM70O94826 608 aa13.17□□□□□ -0.3
NEK4-204ENST00000487068 CHRNA5P30532 468 aa13.17□□□□□ -0.3
NEK4-204ENST00000487068 PDIA6Q15084 440 aa13.17□□□□□ -0.3
NEK4-204ENST00000487068 PRR5LQ6MZQ0 368 aa13.17□□□□□ -0.3
NEK4-204ENST00000487068 COPS6Q7L5N1 327 aa13.17□□□□□ -0.3
NEK4-204ENST00000487068 WDR63Q8IWG1 891 aa13.17□□□□□ -0.3
NEK4-204ENST00000487068 CHMP4AQ9BY43 222 aa13.17□□□□□ -0.3
NEK4-204ENST00000487068 DDX60Q8IY21 1712 aaKnown RBP13.16□□□□□ -0.3
NEK4-204ENST00000487068 SLX4Q8IY92 1834 aa13.16□□□□□ -0.3
NEK4-204ENST00000487068 TWISTNBQ3B726 338 aaPredicted RBP13.16□□□□□ -0.3
NEK4-204ENST00000487068 CCDC30Q5VVM6 783 aa13.16□□□□□ -0.3
NEK4-204ENST00000487068 C2CD5Q86YS7 1000 aa13.16□□□□□ -0.3
NEK4-204ENST00000487068 MIER1Q8N108 512 aa13.16□□□□□ -0.3
NEK4-204ENST00000487068 C8orf58Q8NAV2 365 aa13.16□□□□□ -0.3
NEK4-204ENST00000487068 STK31Q9BXU1 1019 aa13.16□□□□□ -0.3
NEK4-204ENST00000487068 MYH16Q9H6N6 1097 aa13.16□□□□□ -0.3
NEK4-204ENST00000487068 HYPKQ9NX55 129 aa13.16□□□□□ -0.3
NEK4-204ENST00000487068 TIAM2Q8IVF5 1701 aa13.16□□□□□ -0.3
NEK4-204ENST00000487068 WDR90Q96KV7 1748 aa13.16□□□□□ -0.3
NEK4-204ENST00000487068 H0YIN7 160 aa13.15□□□□□ -0.3
NEK4-204ENST00000487068 RGL2O15211 777 aa13.15□□□□□ -0.3
NEK4-204ENST00000487068 PDE6BP35913 854 aa13.15□□□□□ -0.3
NEK4-204ENST00000487068 GOLGA2Q08379 1002 aa13.15□□□□□ -0.3
NEK4-204ENST00000487068 TPTE2Q6XPS3 522 aa13.15□□□□□ -0.3
NEK4-204ENST00000487068 GIGYF2Q6Y7W6 1299 aaKnown RBP13.15□□□□□ -0.3
NEK4-204ENST00000487068 TSPYL6Q8N831 410 aa13.15□□□□□ -0.3
NEK4-204ENST00000487068 NYXQ9GZU5 481 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms