RNA–Protein interactions for RNA: ENST00000487040.1

ECHDC2-213, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 3

Gene ECHDC2, Length 557 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-213ENST00000487040 SENP3-EIF4A1A0A087X0R7 540 aa16.36■□□□□ 0.21
ECHDC2-213ENST00000487040 LRP10Q7Z4F1 713 aa16.36■□□□□ 0.21
ECHDC2-213ENST00000487040 AFDNP55196 1824 aaKnown RBP16.35■□□□□ 0.21
ECHDC2-213ENST00000487040 TTLL7Q6ZT98 887 aa16.35■□□□□ 0.21
ECHDC2-213ENST00000487040 NECTIN2Q92692 538 aa16.35■□□□□ 0.21
ECHDC2-213ENST00000487040 TSR2Q969E8 191 aaKnown RBP16.35■□□□□ 0.21
ECHDC2-213ENST00000487040 SALL2Q9Y467 1007 aaPredicted RBP16.35■□□□□ 0.21
ECHDC2-213ENST00000487040 ATP10DQ9P241 1426 aa16.35■□□□□ 0.21
ECHDC2-213ENST00000487040 KIAA1551Q9HCM1 1747 aa16.34■□□□□ 0.21
ECHDC2-213ENST00000487040 GRIN3BO60391 1043 aa16.34■□□□□ 0.21
ECHDC2-213ENST00000487040 PROSER3Q2NL68 480 aa16.34■□□□□ 0.21
ECHDC2-213ENST00000487040 CNBD1Q8NA66 436 aa16.34■□□□□ 0.21
ECHDC2-213ENST00000487040 C8orf58Q8NAV2 365 aa16.34■□□□□ 0.21
ECHDC2-213ENST00000487040 HYPKQ9NX55 129 aa16.34■□□□□ 0.21
ECHDC2-213ENST00000487040 CHPF2Q9P2E5 772 aa16.34■□□□□ 0.21
ECHDC2-213ENST00000487040 PDZRN3Q9UPQ7 1066 aa16.34■□□□□ 0.21
ECHDC2-213ENST00000487040 NIP7Q9Y221 180 aaKnown RBP eCLIP16.34■□□□□ 0.21
ECHDC2-213ENST00000487040 HLFQ16534 295 aa16.33■□□□□ 0.2
ECHDC2-213ENST00000487040 GIGYF2Q6Y7W6 1299 aaKnown RBP16.33■□□□□ 0.2
ECHDC2-213ENST00000487040 PELP1Q8IZL8 1130 aaKnown RBP16.33■□□□□ 0.2
ECHDC2-213ENST00000487040 ZBTB3Q9H5J0 574 aa16.33■□□□□ 0.2
ECHDC2-213ENST00000487040 MYH16Q9H6N6 1097 aa16.33■□□□□ 0.2
ECHDC2-213ENST00000487040 FANCIQ9NVI1 1328 aa16.33■□□□□ 0.2
ECHDC2-213ENST00000487040 ELL2O00472 640 aaPredicted RBP16.32■□□□□ 0.2
ECHDC2-213ENST00000487040 NPHP1O15259 732 aa16.32■□□□□ 0.2
ECHDC2-213ENST00000487040 ANXA1P04083 346 aa16.32■□□□□ 0.2
ECHDC2-213ENST00000487040 DPEP1P16444 411 aa16.32■□□□□ 0.2
ECHDC2-213ENST00000487040 ST5P78524 1137 aa16.32■□□□□ 0.2
ECHDC2-213ENST00000487040 CCDC30Q5VVM6 783 aa16.32■□□□□ 0.2
ECHDC2-213ENST00000487040 PRR5LQ6MZQ0 368 aa16.32■□□□□ 0.2
ECHDC2-213ENST00000487040 COPS6Q7L5N1 327 aa16.32■□□□□ 0.2
ECHDC2-213ENST00000487040 NBPF5PQ86XG9 351 aaPredicted RBP16.32■□□□□ 0.2
ECHDC2-213ENST00000487040 MIER1Q8N108 512 aa16.32■□□□□ 0.2
ECHDC2-213ENST00000487040 XAGE3Q8WTP9 111 aa16.32■□□□□ 0.2
ECHDC2-213ENST00000487040 ZNF521Q96K83 1311 aa16.32■□□□□ 0.2
ECHDC2-213ENST00000487040 BRIP1Q9BX63 1249 aa16.32■□□□□ 0.2
ECHDC2-213ENST00000487040 NUP98P52948 1817 aa16.31■□□□□ 0.2
ECHDC2-213ENST00000487040 IBTKQ9P2D0 1353 aaPredicted RBP16.31■□□□□ 0.2
ECHDC2-213ENST00000487040 A0A0G2JLW4 131 aa16.31■□□□□ 0.2
ECHDC2-213ENST00000487040 GOLGA2Q08379 1002 aa16.31■□□□□ 0.2
ECHDC2-213ENST00000487040 HSP90AB3PQ58FF7 597 aa16.31■□□□□ 0.2
ECHDC2-213ENST00000487040 TPTE2Q6XPS3 522 aa16.31■□□□□ 0.2
ECHDC2-213ENST00000487040 N4BP2Q86UW6 1770 aaPredicted RBP16.31■□□□□ 0.2
ECHDC2-213ENST00000487040 YBX3P16989 372 aaKnown RBP eCLIP16.3■□□□□ 0.2
ECHDC2-213ENST00000487040 PDE6BP35913 854 aa16.3■□□□□ 0.2
ECHDC2-213ENST00000487040 AIMP1Q12904 312 aaKnown RBP16.3■□□□□ 0.2
ECHDC2-213ENST00000487040 TWISTNBQ3B726 338 aaPredicted RBP16.3■□□□□ 0.2
ECHDC2-213ENST00000487040 TSPYL6Q8N831 410 aa16.3■□□□□ 0.2
ECHDC2-213ENST00000487040 NYXQ9GZU5 481 aa16.3■□□□□ 0.2
ECHDC2-213ENST00000487040 PIM2Q9P1W9 311 aa16.3■□□□□ 0.2
ECHDC2-213ENST00000487040 KCNA3P22001 575 aa16.29■□□□□ 0.2
ECHDC2-213ENST00000487040 PARP10Q53GL7 1025 aa16.29■□□□□ 0.2
ECHDC2-213ENST00000487040 ZNF34Q8IZ26 560 aa16.29■□□□□ 0.2
ECHDC2-213ENST00000487040 STK31Q9BXU1 1019 aa16.29■□□□□ 0.2
ECHDC2-213ENST00000487040 H0YIN7 160 aa16.28■□□□□ 0.2
ECHDC2-213ENST00000487040 ANKRD13DQ6ZTN6 518 aa16.28■□□□□ 0.2
ECHDC2-213ENST00000487040 PLBD2Q8NHP8 589 aa16.28■□□□□ 0.2
ECHDC2-213ENST00000487040 BRCA1P38398 1863 aaKnown RBP16.28■□□□□ 0.2
ECHDC2-213ENST00000487040 GTF2E1P29083 439 aaPredicted RBP16.27■□□□□ 0.2
ECHDC2-213ENST00000487040 CHRNA5P30532 468 aa16.27■□□□□ 0.2
ECHDC2-213ENST00000487040 DALRD3Q5D0E6 543 aaKnown RBP16.27■□□□□ 0.2
ECHDC2-213ENST00000487040 PPP1R42Q7Z4L9 355 aa16.27■□□□□ 0.2
ECHDC2-213ENST00000487040 C2CD5Q86YS7 1000 aa16.27■□□□□ 0.2
ECHDC2-213ENST00000487040 BCS1LQ9Y276 419 aa16.27■□□□□ 0.2
ECHDC2-213ENST00000487040 ANKRD31Q8N7Z5 1873 aa16.27■□□□□ 0.19
ECHDC2-213ENST00000487040 DLEC1Q9Y238 1755 aa16.26■□□□□ 0.19
ECHDC2-213ENST00000487040 RNF123Q5XPI4 1314 aa16.26■□□□□ 0.19
ECHDC2-213ENST00000487040 UBN2Q6ZU65 1347 aa16.26■□□□□ 0.19
ECHDC2-213ENST00000487040 GPTP24298 496 aa16.26■□□□□ 0.19
ECHDC2-213ENST00000487040 EXOSC9Q06265 439 aaKnown RBP16.26■□□□□ 0.19
ECHDC2-213ENST00000487040 TCIRG1Q13488 830 aa16.26■□□□□ 0.19
ECHDC2-213ENST00000487040 SPINK5Q9NQ38 1064 aaPredicted RBP16.26■□□□□ 0.19
ECHDC2-213ENST00000487040 RIC1Q4ADV7 1423 aa16.26■□□□□ 0.19
ECHDC2-213ENST00000487040 ANKRD36CQ5JPF3 1778 aa16.26■□□□□ 0.19
ECHDC2-213ENST00000487040 E9PSI1 815 aa16.25■□□□□ 0.19
ECHDC2-213ENST00000487040 DDX58O95786 925 aaKnown RBP16.25■□□□□ 0.19
ECHDC2-213ENST00000487040 GOLGB1Q14789 3259 aaKnown RBP16.25■□□□□ 0.19
ECHDC2-213ENST00000487040 CHD4Q14839 1912 aa16.24■□□□□ 0.19
ECHDC2-213ENST00000487040 KLRG2A4D1S0 409 aaPredicted RBP16.24■□□□□ 0.19
ECHDC2-213ENST00000487040 FAM177BA6PVY3 158 aa16.24■□□□□ 0.19
ECHDC2-213ENST00000487040 VAMP4O75379 141 aa16.24■□□□□ 0.19
ECHDC2-213ENST00000487040 SUSD4Q5VX71 490 aa16.24■□□□□ 0.19
ECHDC2-213ENST00000487040 CCDC24Q8N4L8 307 aa16.24■□□□□ 0.19
ECHDC2-213ENST00000487040 TTLL6Q8N841 843 aa16.24■□□□□ 0.19
ECHDC2-213ENST00000487040 PHAXQ9H814 394 aaKnown RBP16.24■□□□□ 0.19
ECHDC2-213ENST00000487040 WWC3Q9ULE0 1092 aa16.24■□□□□ 0.19
ECHDC2-213ENST00000487040 ARFGEF1Q9Y6D6 1849 aa16.24■□□□□ 0.19
ECHDC2-213ENST00000487040 NTSR2O95665 410 aa16.23■□□□□ 0.19
ECHDC2-213ENST00000487040 STYK1Q6J9G0 422 aa16.23■□□□□ 0.19
ECHDC2-213ENST00000487040 RIC3Q7Z5B4 369 aa16.23■□□□□ 0.19
ECHDC2-213ENST00000487040 UTP14AQ9BVJ6 771 aaKnown RBP16.23■□□□□ 0.19
ECHDC2-213ENST00000487040 SRGNP10124 158 aa16.22■□□□□ 0.19
ECHDC2-213ENST00000487040 YY1P25490 414 aa16.22■□□□□ 0.19
ECHDC2-213ENST00000487040 TRIM28Q13263 835 aaKnown RBP16.22■□□□□ 0.19
ECHDC2-213ENST00000487040 NLRP10Q86W26 655 aa16.22■□□□□ 0.19
ECHDC2-213ENST00000487040 CNKSR1Q969H4 720 aa16.22■□□□□ 0.19
ECHDC2-213ENST00000487040 MASTLQ96GX5 879 aa16.22■□□□□ 0.19
ECHDC2-213ENST00000487040 COL11A2P13942 1736 aaPredicted RBP16.22■□□□□ 0.19
ECHDC2-213ENST00000487040 ARFGEF2Q9Y6D5 1785 aa16.21■□□□□ 0.19
ECHDC2-213ENST00000487040 SLC4A2P04920 1241 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms