RNA–Protein interactions for RNA: ENST00000486967.5

FAM228B-204, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 5

Gene FAM228B, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-204ENST00000486967 PKD2L1Q9P0L9 805 aa8.68□□□□□ -1.02
FAM228B-204ENST00000486967 PHRF1Q9P1Y6 1649 aaKnown RBP8.68□□□□□ -1.02
FAM228B-204ENST00000486967 CNTNAP1P78357 1384 aa8.67□□□□□ -1.02
FAM228B-204ENST00000486967 BRICD5Q6PL45 260 aa8.67□□□□□ -1.02
FAM228B-204ENST00000486967 CYP4X1Q8N118 509 aa8.67□□□□□ -1.02
FAM228B-204ENST00000486967 TCP11L2Q8N4U5 519 aa8.67□□□□□ -1.02
FAM228B-204ENST00000486967 FAM160A2Q8N612 972 aaPredicted RBP8.67□□□□□ -1.02
FAM228B-204ENST00000486967 KDM2BQ8NHM5 1336 aa8.67□□□□□ -1.02
FAM228B-204ENST00000486967 STRN4Q9NRL3 753 aa8.67□□□□□ -1.02
FAM228B-204ENST00000486967 TNRC6CQ9HCJ0 1690 aaKnown RBP8.66□□□□□ -1.02
FAM228B-204ENST00000486967 HFM1A2PYH4 1435 aa8.66□□□□□ -1.02
FAM228B-204ENST00000486967 ERBINQ96RT1 1412 aa8.66□□□□□ -1.02
FAM228B-204ENST00000486967 MSS51Q4VC12 460 aa8.66□□□□□ -1.02
FAM228B-204ENST00000486967 RRAGCQ9HB90 399 aa8.66□□□□□ -1.02
FAM228B-204ENST00000486967 PRDM11Q9NQV5 511 aa8.66□□□□□ -1.02
FAM228B-204ENST00000486967 PLEKHG2Q9H7P9 1386 aa8.65□□□□□ -1.02
FAM228B-204ENST00000486967 ST8SIA5O15466 376 aa8.65□□□□□ -1.02
FAM228B-204ENST00000486967 PRDM9Q9NQV7 894 aa8.65□□□□□ -1.02
FAM228B-204ENST00000486967 AAASQ9NRG9 546 aa8.65□□□□□ -1.02
FAM228B-204ENST00000486967 KCPQ6ZWJ8 1503 aa8.64□□□□□ -1.03
FAM228B-204ENST00000486967 BCL9O00512 1426 aa8.64□□□□□ -1.03
FAM228B-204ENST00000486967 PNPLA7Q6ZV29 1317 aa8.64□□□□□ -1.03
FAM228B-204ENST00000486967 IGSF1Q8N6C5 1336 aa8.64□□□□□ -1.03
FAM228B-204ENST00000486967 MCOLN1Q9GZU1 580 aa8.64□□□□□ -1.03
FAM228B-204ENST00000486967 VIRMAQ69YN4 1812 aaKnown RBP8.64□□□□□ -1.03
FAM228B-204ENST00000486967 COL6A3P12111 3177 aa8.63□□□□□ -1.03
FAM228B-204ENST00000486967 ADAMTS7Q9UKP4 1686 aa8.63□□□□□ -1.03
FAM228B-204ENST00000486967 POTECB2RU33 542 aa8.63□□□□□ -1.03
FAM228B-204ENST00000486967 MAP2K5Q13163 448 aa8.63□□□□□ -1.03
FAM228B-204ENST00000486967 RNF19BQ6ZMZ0 732 aa8.63□□□□□ -1.03
FAM228B-204ENST00000486967 TOR4AQ9NXH8 423 aa8.63□□□□□ -1.03
FAM228B-204ENST00000486967 THRAP3Q9Y2W1 955 aaKnown RBP8.63□□□□□ -1.03
FAM228B-204ENST00000486967 SZT2Q5T011 3432 aa8.63□□□□□ -1.03
FAM228B-204ENST00000486967 SSH2Q76I76 1423 aa8.63□□□□□ -1.03
FAM228B-204ENST00000486967 BRD4O60885 1362 aaPredicted RBP8.62□□□□□ -1.03
FAM228B-204ENST00000486967 TTC24A2A3L6 582 aaPredicted RBP8.62□□□□□ -1.03
FAM228B-204ENST00000486967 CRIPAKQ8N1N5 446 aa8.62□□□□□ -1.03
FAM228B-204ENST00000486967 CACNA1AO00555 2505 aa8.62□□□□□ -1.03
FAM228B-204ENST00000486967 IQGAP3Q86VI3 1631 aa8.62□□□□□ -1.03
FAM228B-204ENST00000486967 AXIN1O15169 862 aa8.61□□□□□ -1.03
FAM228B-204ENST00000486967 KDM4AO75164 1064 aa8.61□□□□□ -1.03
FAM228B-204ENST00000486967 CD46P15529 392 aa8.61□□□□□ -1.03
FAM228B-204ENST00000486967 VEGFBP49765 207 aa8.61□□□□□ -1.03
FAM228B-204ENST00000486967 CTC1Q2NKJ3 1217 aa8.61□□□□□ -1.03
FAM228B-204ENST00000486967 AVPP01185 164 aa8.6□□□□□ -1.03
FAM228B-204ENST00000486967 SOX10P56693 466 aa8.6□□□□□ -1.03
FAM228B-204ENST00000486967 USP46P62068 366 aa8.6□□□□□ -1.03
FAM228B-204ENST00000486967 NBPF15Q8N660 670 aa8.6□□□□□ -1.03
FAM228B-204ENST00000486967 NAIPQ13075 1403 aa8.6□□□□□ -1.03
FAM228B-204ENST00000486967 LRRC37A3O60309 1634 aa8.59□□□□□ -1.03
FAM228B-204ENST00000486967 IRF6O14896 467 aa8.59□□□□□ -1.03
FAM228B-204ENST00000486967 EVA1CP58658 441 aa8.59□□□□□ -1.03
FAM228B-204ENST00000486967 MAP2K1Q02750 393 aaPredicted RBP8.59□□□□□ -1.03
FAM228B-204ENST00000486967 LARP1Q6PKG0 1096 aaKnown RBP8.59□□□□□ -1.03
FAM228B-204ENST00000486967 USB1Q9BQ65 265 aaKnown RBP8.59□□□□□ -1.03
FAM228B-204ENST00000486967 PKD1L3Q7Z443 1732 aa8.59□□□□□ -1.03
FAM228B-204ENST00000486967 TUBGCP6Q96RT7 1819 aa8.59□□□□□ -1.03
FAM228B-204ENST00000486967 MINK1Q8N4C8 1332 aaPredicted RBP8.58□□□□□ -1.04
FAM228B-204ENST00000486967 CRYBG1Q9Y4K1 1723 aa8.58□□□□□ -1.04
FAM228B-204ENST00000486967 WNT7AO00755 349 aa8.58□□□□□ -1.04
FAM228B-204ENST00000486967 MMP16P51512 607 aa8.58□□□□□ -1.04
FAM228B-204ENST00000486967 MDM2Q00987 491 aaPredicted RBP8.58□□□□□ -1.04
FAM228B-204ENST00000486967 TRIM32Q13049 653 aa8.58□□□□□ -1.04
FAM228B-204ENST00000486967 CHRNA2Q15822 529 aa8.58□□□□□ -1.04
FAM228B-204ENST00000486967 DDB1Q16531 1140 aa8.58□□□□□ -1.04
FAM228B-204ENST00000486967 KDM2AQ9Y2K7 1162 aa8.58□□□□□ -1.04
FAM228B-204ENST00000486967 KIAA0232Q92628 1395 aa8.58□□□□□ -1.04
FAM228B-204ENST00000486967 C9orf131Q5VYM1 1079 aa8.57□□□□□ -1.04
FAM228B-204ENST00000486967 SNIP1Q8TAD8 396 aaKnown RBP8.57□□□□□ -1.04
FAM228B-204ENST00000486967 LRRC4BQ9NT99 713 aa8.57□□□□□ -1.04
FAM228B-204ENST00000486967 TFCP2L1Q9NZI6 479 aa8.57□□□□□ -1.04
FAM228B-204ENST00000486967 MEGF6O75095 1541 aa8.57□□□□□ -1.04
FAM228B-204ENST00000486967 FMN2Q9NZ56 1722 aa8.57□□□□□ -1.04
FAM228B-204ENST00000486967 NRXN1Q9ULB1 1477 aa8.57□□□□□ -1.04
FAM228B-204ENST00000486967 CEP162Q5TB80 1403 aa8.56□□□□□ -1.04
FAM228B-204ENST00000486967 MARCH10Q8NA82 808 aaPredicted RBP8.56□□□□□ -1.04
FAM228B-204ENST00000486967 REPIN1Q9BWE0 567 aaKnown RBP8.56□□□□□ -1.04
FAM228B-204ENST00000486967 ALS2Q96Q42 1657 aa8.56□□□□□ -1.04
FAM228B-204ENST00000486967 AKAP12Q02952 1782 aa8.56□□□□□ -1.04
FAM228B-204ENST00000486967 DXOO77932 396 aaKnown RBP8.55□□□□□ -1.04
FAM228B-204ENST00000486967 VEGFAP15692 232 aaPredicted RBP8.55□□□□□ -1.04
FAM228B-204ENST00000486967 SMCPP49901 116 aaPredicted RBP8.55□□□□□ -1.04
FAM228B-204ENST00000486967 ARHGAP27Q6ZUM4 889 aa8.55□□□□□ -1.04
FAM228B-204ENST00000486967 CCDC24Q8N4L8 307 aa8.55□□□□□ -1.04
FAM228B-204ENST00000486967 KRI1Q8N9T8 703 aaKnown RBP8.55□□□□□ -1.04
FAM228B-204ENST00000486967 TRPM3Q9HCF6 1732 aaPredicted RBP8.54□□□□□ -1.04
FAM228B-204ENST00000486967 DGKZQ13574 1117 aa8.54□□□□□ -1.04
FAM228B-204ENST00000486967 MSL1Q68DK7 614 aa8.54□□□□□ -1.04
FAM228B-204ENST00000486967 TREML4Q6UXN2 200 aa8.54□□□□□ -1.04
FAM228B-204ENST00000486967 HOXA2O43364 376 aa8.53□□□□□ -1.04
FAM228B-204ENST00000486967 CLCN1P35523 988 aa8.53□□□□□ -1.04
FAM228B-204ENST00000486967 MRGPRX2Q96LB1 330 aa8.53□□□□□ -1.04
FAM228B-204ENST00000486967 GPCPD1Q9NPB8 672 aa8.53□□□□□ -1.04
FAM228B-204ENST00000486967 GMPR2Q9P2T1 348 aaKnown RBP8.53□□□□□ -1.04
FAM228B-204ENST00000486967 DACH1Q9UI36 760 aa8.53□□□□□ -1.04
FAM228B-204ENST00000486967 NUTM1Q86Y26 1132 aa8.52□□□□□ -1.05
FAM228B-204ENST00000486967 VSIG10Q8N0Z9 540 aa8.52□□□□□ -1.05
FAM228B-204ENST00000486967 CCDC102AQ96A19 550 aa8.52□□□□□ -1.05
FAM228B-204ENST00000486967 RRP7BPQ9NSQ0 103 aa8.52□□□□□ -1.05
FAM228B-204ENST00000486967 RGPD8O14715 1765 aaPredicted RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms