RNA–Protein interactions for RNA: ENST00000486263.1

NELFCD-209, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 708 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-209ENST00000486263 COL5A3P25940 1745 aaPredicted RBP17.64■□□□□ 0.41
NELFCD-209ENST00000486263 CACNA1FO60840 1977 aa17.63■□□□□ 0.41
NELFCD-209ENST00000486263 NEFLP07196 543 aa17.63■□□□□ 0.41
NELFCD-209ENST00000486263 ANKRD13DQ6ZTN6 518 aa17.63■□□□□ 0.41
NELFCD-209ENST00000486263 C4BP0C0L5 1744 aa17.62■□□□□ 0.41
NELFCD-209ENST00000486263 PTGER2P43116 358 aa17.62■□□□□ 0.41
NELFCD-209ENST00000486263 EIF5P55010 431 aaKnown RBP17.62■□□□□ 0.41
NELFCD-209ENST00000486263 TRAPPC3LQ5T215 181 aa17.62■□□□□ 0.41
NELFCD-209ENST00000486263 SLC4A10Q6U841 1118 aa17.62■□□□□ 0.41
NELFCD-209ENST00000486263 DZIP3Q86Y13 1208 aaKnown RBP17.62■□□□□ 0.41
NELFCD-209ENST00000486263 DZIP1LQ8IYY4 767 aaKnown RBP17.62■□□□□ 0.41
NELFCD-209ENST00000486263 CLUAP1Q96AJ1 413 aa17.62■□□□□ 0.41
NELFCD-209ENST00000486263 PI4KAP2A4QPH2 592 aa17.61■□□□□ 0.41
NELFCD-209ENST00000486263 PHF14O94880 888 aa17.61■□□□□ 0.41
NELFCD-209ENST00000486263 TRIM27P14373 513 aa17.61■□□□□ 0.41
NELFCD-209ENST00000486263 KSR2Q6VAB6 950 aa17.61■□□□□ 0.41
NELFCD-209ENST00000486263 TTLL7Q6ZT98 887 aa17.61■□□□□ 0.41
NELFCD-209ENST00000486263 LRP10Q7Z4F1 713 aa17.61■□□□□ 0.41
NELFCD-209ENST00000486263 PI4KAP1Q8N8J0 262 aa17.61■□□□□ 0.41
NELFCD-209ENST00000486263 SGIP1Q9BQI5 828 aa17.61■□□□□ 0.41
NELFCD-209ENST00000486263 PPP1R1BQ9UD71 204 aaPredicted RBP17.61■□□□□ 0.41
NELFCD-209ENST00000486263 COL15A1P39059 1388 aa17.61■□□□□ 0.41
NELFCD-209ENST00000486263 COL24A1Q17RW2 1714 aa17.61■□□□□ 0.41
NELFCD-209ENST00000486263 RFC4P35249 363 aa17.6■□□□□ 0.41
NELFCD-209ENST00000486263 NEXNQ0ZGT2 675 aa17.6■□□□□ 0.41
NELFCD-209ENST00000486263 PLBD2Q8NHP8 589 aa17.6■□□□□ 0.41
NELFCD-209ENST00000486263 DNAAF4Q8WXU2 420 aa17.6■□□□□ 0.41
NELFCD-209ENST00000486263 ZBTB3Q9H5J0 574 aa17.6■□□□□ 0.41
NELFCD-209ENST00000486263 TBC1D2BQ9UPU7 963 aa17.6■□□□□ 0.41
NELFCD-209ENST00000486263 ATF5Q9Y2D1 282 aaPredicted RBP17.6■□□□□ 0.41
NELFCD-209ENST00000486263 MAP3K2Q9Y2U5 619 aa17.6■□□□□ 0.41
NELFCD-209ENST00000486263 RNF123Q5XPI4 1314 aa17.6■□□□□ 0.41
NELFCD-209ENST00000486263 UBR3Q6ZT12 1888 aa17.6■□□□□ 0.41
NELFCD-209ENST00000486263 F6X3S4 739 aa17.59■□□□□ 0.41
NELFCD-209ENST00000486263 MSH5O43196 834 aa17.59■□□□□ 0.41
NELFCD-209ENST00000486263 ZPR1O75312 459 aa17.59■□□□□ 0.41
NELFCD-209ENST00000486263 ADRA2BP18089 450 aa17.59■□□□□ 0.41
NELFCD-209ENST00000486263 SSFA2P28290 1259 aa17.59■□□□□ 0.41
NELFCD-209ENST00000486263 PDE3AQ14432 1141 aa17.59■□□□□ 0.41
NELFCD-209ENST00000486263 COL23A1Q86Y22 540 aaPredicted RBP17.59■□□□□ 0.41
NELFCD-209ENST00000486263 MAP3K15Q6ZN16 1313 aa17.58■□□□□ 0.4
NELFCD-209ENST00000486263 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.58■□□□□ 0.4
NELFCD-209ENST00000486263 MYH14Q7Z406 1995 aaKnown RBP17.57■□□□□ 0.4
NELFCD-209ENST00000486263 ERVV-1B6SEH8 477 aa17.57■□□□□ 0.4
NELFCD-209ENST00000486263 CCT4P50991 539 aaKnown RBP17.57■□□□□ 0.4
NELFCD-209ENST00000486263 PANK1Q8TE04 598 aa17.57■□□□□ 0.4
NELFCD-209ENST00000486263 ARHGEF1Q92888 912 aaKnown RBP17.57■□□□□ 0.4
NELFCD-209ENST00000486263 TNNQ9UQP3 1299 aa17.57■□□□□ 0.4
NELFCD-209ENST00000486263 ZNF652Q9Y2D9 606 aa17.57■□□□□ 0.4
NELFCD-209ENST00000486263 POLD1P28340 1107 aa17.56■□□□□ 0.4
NELFCD-209ENST00000486263 IRX6P78412 446 aaPredicted RBP17.56■□□□□ 0.4
NELFCD-209ENST00000486263 HSP90AB3PQ58FF7 597 aa17.56■□□□□ 0.4
NELFCD-209ENST00000486263 SMIM5Q71RC9 77 aa17.56■□□□□ 0.4
NELFCD-209ENST00000486263 ITPRIPQ8IWB1 547 aa17.56■□□□□ 0.4
NELFCD-209ENST00000486263 MYD88Q99836 296 aa17.56■□□□□ 0.4
NELFCD-209ENST00000486263 METTL22Q9BUU2 404 aaPredicted RBP17.56■□□□□ 0.4
NELFCD-209ENST00000486263 ADCY9O60503 1353 aa17.55■□□□□ 0.4
NELFCD-209ENST00000486263 ABCC4O15439 1325 aa17.55■□□□□ 0.4
NELFCD-209ENST00000486263 C20orf194Q5TEA3 1177 aa17.55■□□□□ 0.4
NELFCD-209ENST00000486263 TMEM57Q8N5G2 664 aa17.55■□□□□ 0.4
NELFCD-209ENST00000486263 NARFQ9UHQ1 456 aa17.55■□□□□ 0.4
NELFCD-209ENST00000486263 CAMTA2O94983 1202 aa17.54■□□□□ 0.4
NELFCD-209ENST00000486263 GIGYF2Q6Y7W6 1299 aaKnown RBP17.54■□□□□ 0.4
NELFCD-209ENST00000486263 SRCIN1Q9C0H9 1055 aa17.54■□□□□ 0.4
NELFCD-209ENST00000486263 COG6Q9Y2V7 657 aa17.54■□□□□ 0.4
NELFCD-209ENST00000486263 RLBP1P12271 317 aa17.53■□□□□ 0.4
NELFCD-209ENST00000486263 TCIRG1Q13488 830 aa17.53■□□□□ 0.4
NELFCD-209ENST00000486263 HLFQ16534 295 aa17.53■□□□□ 0.4
NELFCD-209ENST00000486263 USPL1Q5W0Q7 1092 aa17.53■□□□□ 0.4
NELFCD-209ENST00000486263 LINS1Q8NG48 757 aa17.53■□□□□ 0.4
NELFCD-209ENST00000486263 CHMP4BQ9H444 224 aaKnown RBP17.53■□□□□ 0.4
NELFCD-209ENST00000486263 SRP68Q9UHB9 627 aaKnown RBP17.53■□□□□ 0.4
NELFCD-209ENST00000486263 MVPQ14764 893 aaKnown RBP17.52■□□□□ 0.4
NELFCD-209ENST00000486263 BEND3Q5T5X7 828 aa17.52■□□□□ 0.4
NELFCD-209ENST00000486263 INTS3Q68E01 1043 aaKnown RBP17.52■□□□□ 0.4
NELFCD-209ENST00000486263 CLEC4GQ6UXB4 293 aa17.52■□□□□ 0.4
NELFCD-209ENST00000486263 AMIGO3Q86WK7 504 aa17.52■□□□□ 0.4
NELFCD-209ENST00000486263 USP42Q9H9J4 1324 aaKnown RBP17.51■□□□□ 0.39
NELFCD-209ENST00000486263 PXDNLA1KZ92 1463 aa17.51■□□□□ 0.39
NELFCD-209ENST00000486263 ATP5J2-PTCD1G3V325 749 aa17.51■□□□□ 0.39
NELFCD-209ENST00000486263 ALDH1L1O75891 902 aa17.51■□□□□ 0.39
NELFCD-209ENST00000486263 CRBNQ96SW2 442 aa17.51■□□□□ 0.39
NELFCD-209ENST00000486263 DDX19BQ9UMR2 479 aa17.51■□□□□ 0.39
NELFCD-209ENST00000486263 RGL2O15211 777 aa17.5■□□□□ 0.39
NELFCD-209ENST00000486263 GPTP24298 496 aa17.5■□□□□ 0.39
NELFCD-209ENST00000486263 CWF19L2Q2TBE0 894 aaKnown RBP17.5■□□□□ 0.39
NELFCD-209ENST00000486263 ATP10DQ9P241 1426 aa17.49■□□□□ 0.39
NELFCD-209ENST00000486263 ARFGEF2Q9Y6D5 1785 aa17.49■□□□□ 0.39
NELFCD-209ENST00000486263 SYT17Q9BSW7 474 aa17.49■□□□□ 0.39
NELFCD-209ENST00000486263 FHDC1Q9C0D6 1143 aaPredicted RBP17.49■□□□□ 0.39
NELFCD-209ENST00000486263 CWC25Q9NXE8 425 aaPredicted RBP17.49■□□□□ 0.39
NELFCD-209ENST00000486263 C9orf78Q9NZ63 289 aaPredicted RBP17.49■□□□□ 0.39
NELFCD-209ENST00000486263 NIP7Q9Y221 180 aaKnown RBP eCLIP17.49■□□□□ 0.39
NELFCD-209ENST00000486263 NEURL1BA8MQ27 555 aa17.48■□□□□ 0.39
NELFCD-209ENST00000486263 IGKV5-2P06315 115 aa17.48■□□□□ 0.39
NELFCD-209ENST00000486263 FKBP8Q14318 412 aa17.48■□□□□ 0.39
NELFCD-209ENST00000486263 BICDL1Q6ZP65 573 aa17.48■□□□□ 0.39
NELFCD-209ENST00000486263 CCDC191Q8NCU4 936 aa17.48■□□□□ 0.39
NELFCD-209ENST00000486263 SETDB2Q96T68 719 aa17.48■□□□□ 0.39
NELFCD-209ENST00000486263 TRIM28Q13263 835 aaKnown RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms