RNA–Protein interactions for RNA: ENST00000485363.1

SIK3-211, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-211ENST00000485363 NBPF5PQ86XG9 351 aaPredicted RBP20.88■□□□□ 0.93
SIK3-211ENST00000485363 COL11A2P13942 1736 aaPredicted RBP20.87■□□□□ 0.93
SIK3-211ENST00000485363 CCDC146Q8IYE0 955 aa20.87■□□□□ 0.93
SIK3-211ENST00000485363 PRKRIP1Q9H875 184 aaPredicted RBP20.87■□□□□ 0.93
SIK3-211ENST00000485363 BABAM1Q9NWV8 329 aa20.87■□□□□ 0.93
SIK3-211ENST00000485363 NIP7Q9Y221 180 aaKnown RBP eCLIP20.87■□□□□ 0.93
SIK3-211ENST00000485363 KIF3CO14782 793 aa20.86■□□□□ 0.93
SIK3-211ENST00000485363 RRP7AQ9Y3A4 280 aaKnown RBP20.86■□□□□ 0.93
SIK3-211ENST00000485363 RASSF7Q02833 373 aa20.85■□□□□ 0.93
SIK3-211ENST00000485363 TPTE2Q6XPS3 522 aa20.85■□□□□ 0.93
SIK3-211ENST00000485363 NGEFQ8N5V2 710 aa20.85■□□□□ 0.93
SIK3-211ENST00000485363 RUNDC1Q96C34 613 aa20.85■□□□□ 0.93
SIK3-211ENST00000485363 MYL6BP14649 208 aa20.84■□□□□ 0.93
SIK3-211ENST00000485363 NEUROD2Q15784 382 aa20.84■□□□□ 0.93
SIK3-211ENST00000485363 HLFQ16534 295 aa20.84■□□□□ 0.93
SIK3-211ENST00000485363 ERBB4Q15303 1308 aa20.83■□□□□ 0.93
SIK3-211ENST00000485363 ERVV-1B6SEH8 477 aa20.83■□□□□ 0.93
SIK3-211ENST00000485363 SRGNP10124 158 aa20.83■□□□□ 0.93
SIK3-211ENST00000485363 LMNB1P20700 586 aa20.83■□□□□ 0.93
SIK3-211ENST00000485363 STYK1Q6J9G0 422 aa20.83■□□□□ 0.93
SIK3-211ENST00000485363 KIF6Q6ZMV9 814 aa20.83■□□□□ 0.93
SIK3-211ENST00000485363 CNKSR1Q969H4 720 aa20.83■□□□□ 0.93
SIK3-211ENST00000485363 ADAMTS8Q9UP79 889 aa20.83■□□□□ 0.93
SIK3-211ENST00000485363 NUP98P52948 1817 aa20.83■□□□□ 0.92
SIK3-211ENST00000485363 MAP3K15Q6ZN16 1313 aa20.82■□□□□ 0.92
SIK3-211ENST00000485363 KDM2BQ8NHM5 1336 aa20.82■□□□□ 0.92
SIK3-211ENST00000485363 MASTLQ96GX5 879 aa20.82■□□□□ 0.92
SIK3-211ENST00000485363 NMRK2Q9NPI5 230 aa20.82■□□□□ 0.92
SIK3-211ENST00000485363 CACNA1SQ13698 1873 aa20.81■□□□□ 0.92
SIK3-211ENST00000485363 CCDC88AQ3V6T2 1871 aa20.81■□□□□ 0.92
SIK3-211ENST00000485363 ZC3H4Q9UPT8 1303 aaKnown RBP20.81■□□□□ 0.92
SIK3-211ENST00000485363 C21orf2O43822 256 aa20.81■□□□□ 0.92
SIK3-211ENST00000485363 ZEB1P37275 1124 aaPredicted RBP20.81■□□□□ 0.92
SIK3-211ENST00000485363 ARFGEF2Q9Y6D5 1785 aa20.8■□□□□ 0.92
SIK3-211ENST00000485363 FAM177BA6PVY3 158 aa20.8■□□□□ 0.92
SIK3-211ENST00000485363 NFKBIEO00221 500 aa20.8■□□□□ 0.92
SIK3-211ENST00000485363 GTF2E1P29083 439 aaPredicted RBP20.8■□□□□ 0.92
SIK3-211ENST00000485363 TTLL7Q6ZT98 887 aa20.8■□□□□ 0.92
SIK3-211ENST00000485363 ZNF219Q9P2Y4 722 aaPredicted RBP20.8■□□□□ 0.92
SIK3-211ENST00000485363 SLX4Q8IY92 1834 aa20.79■□□□□ 0.92
SIK3-211ENST00000485363 EIF2S2P20042 333 aaKnown RBP20.79■□□□□ 0.92
SIK3-211ENST00000485363 PRPF40BQ6NWY9 871 aaKnown RBP20.79■□□□□ 0.92
SIK3-211ENST00000485363 FER1L6Q2WGJ9 1857 aa20.79■□□□□ 0.92
SIK3-211ENST00000485363 TOMM70O94826 608 aa20.78■□□□□ 0.92
SIK3-211ENST00000485363 NPR1P16066 1061 aa20.78■□□□□ 0.92
SIK3-211ENST00000485363 HSPA6P17066 643 aa20.78■□□□□ 0.92
SIK3-211ENST00000485363 PRELPP51888 382 aa20.78■□□□□ 0.92
SIK3-211ENST00000485363 NYXQ9GZU5 481 aa20.78■□□□□ 0.92
SIK3-211ENST00000485363 ZBTB3Q9H5J0 574 aa20.78■□□□□ 0.92
SIK3-211ENST00000485363 TRIM35Q9UPQ4 493 aa20.78■□□□□ 0.92
SIK3-211ENST00000485363 KLRG2A4D1S0 409 aaPredicted RBP20.77■□□□□ 0.92
SIK3-211ENST00000485363 CHL1O00533 1208 aa20.77■□□□□ 0.92
SIK3-211ENST00000485363 SOGA3Q5TF21 947 aa20.77■□□□□ 0.92
SIK3-211ENST00000485363 C16orf71Q8IYS4 520 aaPredicted RBP20.77■□□□□ 0.92
SIK3-211ENST00000485363 LAS1LQ9Y4W2 734 aaKnown RBP20.77■□□□□ 0.92
SIK3-211ENST00000485363 TIAM2Q8IVF5 1701 aa20.77■□□□□ 0.92
SIK3-211ENST00000485363 CEP350Q5VT06 3117 aa20.77■□□□□ 0.92
SIK3-211ENST00000485363 TNRC6CQ9HCJ0 1690 aaKnown RBP20.77■□□□□ 0.91
SIK3-211ENST00000485363 DICER1Q9UPY3 1922 aaKnown RBP20.75■□□□□ 0.91
SIK3-211ENST00000485363 PDIA6Q15084 440 aa20.75■□□□□ 0.91
SIK3-211ENST00000485363 GIGYF2Q6Y7W6 1299 aaKnown RBP20.75■□□□□ 0.91
SIK3-211ENST00000485363 TAOK3Q9H2K8 898 aa20.75■□□□□ 0.91
SIK3-211ENST00000485363 LTBP3Q9NS15 1303 aa20.75■□□□□ 0.91
SIK3-211ENST00000485363 GPTP24298 496 aa20.74■□□□□ 0.91
SIK3-211ENST00000485363 LRP10Q7Z4F1 713 aa20.74■□□□□ 0.91
SIK3-211ENST00000485363 RRAGCQ9HB90 399 aa20.74■□□□□ 0.91
SIK3-211ENST00000485363 IBTKQ9P2D0 1353 aaPredicted RBP20.73■□□□□ 0.91
SIK3-211ENST00000485363 GLTPD2A6NH11 291 aa20.73■□□□□ 0.91
SIK3-211ENST00000485363 NUTM1Q86Y26 1132 aa20.73■□□□□ 0.91
SIK3-211ENST00000485363 ZNF34Q8IZ26 560 aa20.73■□□□□ 0.91
SIK3-211ENST00000485363 UBN2Q6ZU65 1347 aa20.73■□□□□ 0.91
SIK3-211ENST00000485363 ALDH1B1P30837 517 aa20.72■□□□□ 0.91
SIK3-211ENST00000485363 PROSER3Q2NL68 480 aa20.72■□□□□ 0.91
SIK3-211ENST00000485363 ERFEQ4G0M1 354 aa20.72■□□□□ 0.91
SIK3-211ENST00000485363 RBM46Q8TBY0 533 aaKnown RBP20.72■□□□□ 0.91
SIK3-211ENST00000485363 C7orf43Q8WVR3 580 aa20.72■□□□□ 0.91
SIK3-211ENST00000485363 NECTIN2Q92692 538 aa20.72■□□□□ 0.91
SIK3-211ENST00000485363 ABCC12Q96J65 1359 aa20.72■□□□□ 0.91
SIK3-211ENST00000485363 ANXA1P04083 346 aa20.71■□□□□ 0.91
SIK3-211ENST00000485363 KRT24Q2M2I5 525 aa20.71■□□□□ 0.91
SIK3-211ENST00000485363 PARP10Q53GL7 1025 aa20.71■□□□□ 0.91
SIK3-211ENST00000485363 CCDC93Q567U6 631 aa20.71■□□□□ 0.91
SIK3-211ENST00000485363 SUSD4Q5VX71 490 aa20.71■□□□□ 0.91
SIK3-211ENST00000485363 CFAP44Q96MT7 982 aa20.71■□□□□ 0.91
SIK3-211ENST00000485363 RIC1Q4ADV7 1423 aa20.7■□□□□ 0.9
SIK3-211ENST00000485363 CRY2Q49AN0 593 aa20.7■□□□□ 0.9
SIK3-211ENST00000485363 DPY19L2Q6NUT2 758 aa20.7■□□□□ 0.9
SIK3-211ENST00000485363 PPP1R42Q7Z4L9 355 aa20.7■□□□□ 0.9
SIK3-211ENST00000485363 DDX21Q9NR30 783 aaKnown RBP eCLIP20.7■□□□□ 0.9
SIK3-211ENST00000485363 APAF1O14727 1248 aa20.69■□□□□ 0.9
SIK3-211ENST00000485363 COPS6Q7L5N1 327 aa20.69■□□□□ 0.9
SIK3-211ENST00000485363 NTSR2O95665 410 aa20.68■□□□□ 0.9
SIK3-211ENST00000485363 HOXB7P09629 217 aa20.68■□□□□ 0.9
SIK3-211ENST00000485363 AIMP1Q12904 312 aaKnown RBP20.68■□□□□ 0.9
SIK3-211ENST00000485363 HSP90AB3PQ58FF7 597 aa20.68■□□□□ 0.9
SIK3-211ENST00000485363 XAGE3Q8WTP9 111 aa20.68■□□□□ 0.9
SIK3-211ENST00000485363 ANKRD36CQ5JPF3 1778 aa20.67■□□□□ 0.9
SIK3-211ENST00000485363 VEGFAP15692 232 aaPredicted RBP20.67■□□□□ 0.9
SIK3-211ENST00000485363 APLP1P51693 650 aa20.67■□□□□ 0.9
SIK3-211ENST00000485363 CALD1Q05682 793 aaKnown RBP20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms