RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 YBX3P16989 372 aaKnown RBP eCLIP24.8■■□□□ 1.56
SNX17-206ENST00000484886 PROSER3Q2NL68 480 aa24.8■■□□□ 1.56
SNX17-206ENST00000484886 NCBP3Q53F19 620 aaKnown RBP24.8■■□□□ 1.56
SNX17-206ENST00000484886 TTLL7Q6ZT98 887 aa24.8■■□□□ 1.56
SNX17-206ENST00000484886 TSR2Q969E8 191 aaKnown RBP24.8■■□□□ 1.56
SNX17-206ENST00000484886 ZBTB3Q9H5J0 574 aa24.8■■□□□ 1.56
SNX17-206ENST00000484886 NRXN2Q9P2S2 1712 aa24.8■■□□□ 1.56
SNX17-206ENST00000484886 MAP3K15Q6ZN16 1313 aa24.8■■□□□ 1.56
SNX17-206ENST00000484886 CCER2I3L3R5 266 aa24.79■■□□□ 1.56
SNX17-206ENST00000484886 PDIA6Q15084 440 aa24.79■■□□□ 1.56
SNX17-206ENST00000484886 HLFQ16534 295 aa24.79■■□□□ 1.56
SNX17-206ENST00000484886 NIP7Q9Y221 180 aaKnown RBP eCLIP24.79■■□□□ 1.56
SNX17-206ENST00000484886 KIAA1551Q9HCM1 1747 aa24.78■■□□□ 1.56
SNX17-206ENST00000484886 CNBD1Q8NA66 436 aa24.78■■□□□ 1.56
SNX17-206ENST00000484886 CHPF2Q9P2E5 772 aa24.78■■□□□ 1.56
SNX17-206ENST00000484886 ERVV-1B6SEH8 477 aa24.77■■□□□ 1.56
SNX17-206ENST00000484886 GRIN3BO60391 1043 aa24.77■■□□□ 1.56
SNX17-206ENST00000484886 AIMP1Q12904 312 aaKnown RBP24.77■■□□□ 1.56
SNX17-206ENST00000484886 NBPF5PQ86XG9 351 aaPredicted RBP24.77■■□□□ 1.56
SNX17-206ENST00000484886 DDX21Q9NR30 783 aaKnown RBP eCLIP24.77■■□□□ 1.56
SNX17-206ENST00000484886 IL16Q14005 1332 aa24.77■■□□□ 1.56
SNX17-206ENST00000484886 FAM177BA6PVY3 158 aa24.76■■□□□ 1.55
SNX17-206ENST00000484886 RGL2O15211 777 aa24.76■■□□□ 1.55
SNX17-206ENST00000484886 CCDC24Q8N4L8 307 aa24.76■■□□□ 1.55
SNX17-206ENST00000484886 CHRNA5P30532 468 aa24.75■■□□□ 1.55
SNX17-206ENST00000484886 ST5P78524 1137 aa24.75■■□□□ 1.55
SNX17-206ENST00000484886 PRR5LQ6MZQ0 368 aa24.75■■□□□ 1.55
SNX17-206ENST00000484886 WDR63Q8IWG1 891 aa24.75■■□□□ 1.55
SNX17-206ENST00000484886 C8orf58Q8NAV2 365 aa24.75■■□□□ 1.55
SNX17-206ENST00000484886 XAGE3Q8WTP9 111 aa24.75■■□□□ 1.55
SNX17-206ENST00000484886 BCS1LQ9Y276 419 aa24.75■■□□□ 1.55
SNX17-206ENST00000484886 NUP98P52948 1817 aa24.75■■□□□ 1.55
SNX17-206ENST00000484886 COPS6Q7L5N1 327 aa24.74■■□□□ 1.55
SNX17-206ENST00000484886 DBF4Q9UBU7 674 aaPredicted RBP24.74■■□□□ 1.55
SNX17-206ENST00000484886 YY1P25490 414 aa24.73■■□□□ 1.55
SNX17-206ENST00000484886 LRP10Q7Z4F1 713 aa24.73■■□□□ 1.55
SNX17-206ENST00000484886 PIM2Q9P1W9 311 aa24.73■■□□□ 1.55
SNX17-206ENST00000484886 GPTP24298 496 aa24.72■■□□□ 1.55
SNX17-206ENST00000484886 GTF2E1P29083 439 aaPredicted RBP24.72■■□□□ 1.55
SNX17-206ENST00000484886 C2CD5Q86YS7 1000 aa24.72■■□□□ 1.55
SNX17-206ENST00000484886 CHMP4AQ9BY43 222 aa24.71■■□□□ 1.55
SNX17-206ENST00000484886 HYPKQ9NX55 129 aa24.71■■□□□ 1.55
SNX17-206ENST00000484886 ATP10DQ9P241 1426 aa24.7■■□□□ 1.55
SNX17-206ENST00000484886 FANCIQ9NVI1 1328 aa24.7■■□□□ 1.54
SNX17-206ENST00000484886 H0YIN7 160 aa24.7■■□□□ 1.54
SNX17-206ENST00000484886 PDE6BP35913 854 aa24.7■■□□□ 1.54
SNX17-206ENST00000484886 DALRD3Q5D0E6 543 aaKnown RBP24.7■■□□□ 1.54
SNX17-206ENST00000484886 TPTE2Q6XPS3 522 aa24.7■■□□□ 1.54
SNX17-206ENST00000484886 GIGYF2Q6Y7W6 1299 aaKnown RBP24.7■■□□□ 1.54
SNX17-206ENST00000484886 TSPYL6Q8N831 410 aa24.7■■□□□ 1.54
SNX17-206ENST00000484886 BRIP1Q9BX63 1249 aa24.7■■□□□ 1.54
SNX17-206ENST00000484886 CHD4Q14839 1912 aa24.7■■□□□ 1.54
SNX17-206ENST00000484886 BRCA1P38398 1863 aaKnown RBP24.69■■□□□ 1.54
SNX17-206ENST00000484886 ANKRD31Q8N7Z5 1873 aa24.69■■□□□ 1.54
SNX17-206ENST00000484886 KCNA3P22001 575 aa24.69■■□□□ 1.54
SNX17-206ENST00000484886 MIER1Q8N108 512 aa24.69■■□□□ 1.54
SNX17-206ENST00000484886 TWISTNBQ3B726 338 aaPredicted RBP24.68■■□□□ 1.54
SNX17-206ENST00000484886 CCDC30Q5VVM6 783 aa24.68■■□□□ 1.54
SNX17-206ENST00000484886 NYXQ9GZU5 481 aa24.68■■□□□ 1.54
SNX17-206ENST00000484886 GOLGA2Q08379 1002 aa24.67■■□□□ 1.54
SNX17-206ENST00000484886 MYH16Q9H6N6 1097 aa24.67■■□□□ 1.54
SNX17-206ENST00000484886 ZNF622Q969S3 477 aaKnown RBP eCLIP24.66■■□□□ 1.54
SNX17-206ENST00000484886 UBN2Q6ZU65 1347 aa24.65■■□□□ 1.54
SNX17-206ENST00000484886 DLEC1Q9Y238 1755 aa24.65■■□□□ 1.54
SNX17-206ENST00000484886 HSP90AB3PQ58FF7 597 aa24.65■■□□□ 1.54
SNX17-206ENST00000484886 ZNF34Q8IZ26 560 aa24.65■■□□□ 1.54
SNX17-206ENST00000484886 STK31Q9BXU1 1019 aa24.65■■□□□ 1.54
SNX17-206ENST00000484886 PDZRN3Q9UPQ7 1066 aa24.65■■□□□ 1.54
SNX17-206ENST00000484886 ANKRD13DQ6ZTN6 518 aa24.64■■□□□ 1.54
SNX17-206ENST00000484886 NUTM1Q86Y26 1132 aa24.64■■□□□ 1.54
SNX17-206ENST00000484886 PLBD2Q8NHP8 589 aa24.64■■□□□ 1.54
SNX17-206ENST00000484886 GOLGB1Q14789 3259 aaKnown RBP24.64■■□□□ 1.53
SNX17-206ENST00000484886 ANKRD36CQ5JPF3 1778 aa24.63■■□□□ 1.53
SNX17-206ENST00000484886 TCERG1O14776 1098 aaKnown RBP24.63■■□□□ 1.53
SNX17-206ENST00000484886 EXOSC9Q06265 439 aaKnown RBP24.63■■□□□ 1.53
SNX17-206ENST00000484886 PARP10Q53GL7 1025 aa24.63■■□□□ 1.53
SNX17-206ENST00000484886 SUSD4Q5VX71 490 aa24.63■■□□□ 1.53
SNX17-206ENST00000484886 ARHGAP27Q6ZUM4 889 aa24.63■■□□□ 1.53
SNX17-206ENST00000484886 PPP1R42Q7Z4L9 355 aa24.63■■□□□ 1.53
SNX17-206ENST00000484886 TTLL6Q8N841 843 aa24.63■■□□□ 1.53
SNX17-206ENST00000484886 PHAXQ9H814 394 aaKnown RBP24.63■■□□□ 1.53
SNX17-206ENST00000484886 SPINK5Q9NQ38 1064 aaPredicted RBP24.63■■□□□ 1.53
SNX17-206ENST00000484886 COL11A2P13942 1736 aaPredicted RBP24.63■■□□□ 1.53
SNX17-206ENST00000484886 ARFGEF1Q9Y6D6 1849 aa24.62■■□□□ 1.53
SNX17-206ENST00000484886 TCIRG1Q13488 830 aa24.61■■□□□ 1.53
SNX17-206ENST00000484886 ERFEQ4G0M1 354 aa24.61■■□□□ 1.53
SNX17-206ENST00000484886 RIC3Q7Z5B4 369 aa24.61■■□□□ 1.53
SNX17-206ENST00000484886 IBTKQ9P2D0 1353 aaPredicted RBP24.61■■□□□ 1.53
SNX17-206ENST00000484886 UTRNP46939 3433 aa24.61■■□□□ 1.53
SNX17-206ENST00000484886 UTP14AQ9BVJ6 771 aaKnown RBP24.6■■□□□ 1.53
SNX17-206ENST00000484886 ABCC12Q96J65 1359 aa24.59■■□□□ 1.53
SNX17-206ENST00000484886 DDX58O95786 925 aaKnown RBP24.59■■□□□ 1.53
SNX17-206ENST00000484886 ARFGEF2Q9Y6D5 1785 aa24.59■■□□□ 1.53
SNX17-206ENST00000484886 ZNF521Q96K83 1311 aa24.59■■□□□ 1.53
SNX17-206ENST00000484886 NTSR2O95665 410 aa24.58■■□□□ 1.53
SNX17-206ENST00000484886 ZNF428Q96B54 188 aa24.58■■□□□ 1.53
SNX17-206ENST00000484886 MASTLQ96GX5 879 aa24.58■■□□□ 1.53
SNX17-206ENST00000484886 ZNF219Q9P2Y4 722 aaPredicted RBP24.58■■□□□ 1.53
SNX17-206ENST00000484886 SRGNP10124 158 aa24.57■■□□□ 1.52
SNX17-206ENST00000484886 STYK1Q6J9G0 422 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms