RNA–Protein interactions for RNA: ENST00000484546.1

CDK5RAP2-217, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 1,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-217ENST00000484546 BRCA1P38398 1863 aaKnown RBP15.15■□□□□ 0.02
CDK5RAP2-217ENST00000484546 ELL2O00472 640 aaPredicted RBP15.15■□□□□ 0.02
CDK5RAP2-217ENST00000484546 GPR162Q16538 588 aa15.15■□□□□ 0.02
CDK5RAP2-217ENST00000484546 PELP1Q8IZL8 1130 aaKnown RBP15.15■□□□□ 0.02
CDK5RAP2-217ENST00000484546 MYH16Q9H6N6 1097 aa15.15■□□□□ 0.02
CDK5RAP2-217ENST00000484546 SERPINB2P05120 415 aa15.14■□□□□ 0.01
CDK5RAP2-217ENST00000484546 YBX3P16989 372 aaKnown RBP eCLIP15.14■□□□□ 0.011e-7■□□□□ 8.1
CDK5RAP2-217ENST00000484546 GOLGA2Q08379 1002 aa15.14■□□□□ 0.01
CDK5RAP2-217ENST00000484546 SETDB2Q96T68 719 aa15.14■□□□□ 0.01
CDK5RAP2-217ENST00000484546 RGL2O15211 777 aa15.13■□□□□ 0.01
CDK5RAP2-217ENST00000484546 TGFB2P61812 414 aa15.13■□□□□ 0.01
CDK5RAP2-217ENST00000484546 PDIA6Q15084 440 aa15.13■□□□□ 0.01
CDK5RAP2-217ENST00000484546 PROSER3Q2NL68 480 aa15.13■□□□□ 0.01
CDK5RAP2-217ENST00000484546 LRP10Q7Z4F1 713 aa15.13■□□□□ 0.01
CDK5RAP2-217ENST00000484546 ANKRD31Q8N7Z5 1873 aa15.13■□□□□ 0.01
CDK5RAP2-217ENST00000484546 CHPF2Q9P2E5 772 aa15.13■□□□□ 0.01
CDK5RAP2-217ENST00000484546 DBF4Q9UBU7 674 aaPredicted RBP15.13■□□□□ 0.01
CDK5RAP2-217ENST00000484546 DLEC1Q9Y238 1755 aa15.13■□□□□ 0.01
CDK5RAP2-217ENST00000484546 NUP98P52948 1817 aa15.13■□□□□ 0.01
CDK5RAP2-217ENST00000484546 DPEP1P16444 411 aa15.12■□□□□ 0.01
CDK5RAP2-217ENST00000484546 AIMP1Q12904 312 aaKnown RBP15.12■□□□□ 0.01
CDK5RAP2-217ENST00000484546 CCDC30Q5VVM6 783 aa15.12■□□□□ 0.01
CDK5RAP2-217ENST00000484546 CLEC4GQ6UXB4 293 aa15.12■□□□□ 0.01
CDK5RAP2-217ENST00000484546 TTLL7Q6ZT98 887 aa15.12■□□□□ 0.01
CDK5RAP2-217ENST00000484546 ZBTB3Q9H5J0 574 aa15.12■□□□□ 0.01
CDK5RAP2-217ENST00000484546 DDX21Q9NR30 783 aaKnown RBP eCLIP15.12■□□□□ 0.01
CDK5RAP2-217ENST00000484546 WWC3Q9ULE0 1092 aa15.12■□□□□ 0.01
CDK5RAP2-217ENST00000484546 MAP3K15Q6ZN16 1313 aa15.12■□□□□ 0.01
CDK5RAP2-217ENST00000484546 FANCIQ9NVI1 1328 aa15.12■□□□□ 0.01
CDK5RAP2-217ENST00000484546 ATP10DQ9P241 1426 aa15.11■□□□□ 0.01
CDK5RAP2-217ENST00000484546 ANXA1P04083 346 aa15.11■□□□□ 0.01
CDK5RAP2-217ENST00000484546 HLFQ16534 295 aa15.11■□□□□ 0.01
CDK5RAP2-217ENST00000484546 TWISTNBQ3B726 338 aaPredicted RBP15.11■□□□□ 0.01
CDK5RAP2-217ENST00000484546 C8orf58Q8NAV2 365 aa15.11■□□□□ 0.01
CDK5RAP2-217ENST00000484546 STK31Q9BXU1 1019 aa15.11■□□□□ 0.01
CDK5RAP2-217ENST00000484546 HYPKQ9NX55 129 aa15.11■□□□□ 0.01
CDK5RAP2-217ENST00000484546 NIP7Q9Y221 180 aaKnown RBP eCLIP15.11■□□□□ 0.01
CDK5RAP2-217ENST00000484546 COL11A2P13942 1736 aaPredicted RBP15.11■□□□□ 0.01
CDK5RAP2-217ENST00000484546 CHD4Q14839 1912 aa15.1■□□□□ 0.01
CDK5RAP2-217ENST00000484546 A0A0G2JLW4 131 aa15.1■□□□□ 0.01
CDK5RAP2-217ENST00000484546 ERVV-1B6SEH8 477 aa15.1■□□□□ 0.01
CDK5RAP2-217ENST00000484546 PRR5LQ6MZQ0 368 aa15.1■□□□□ 0.01
CDK5RAP2-217ENST00000484546 GTF2E1P29083 439 aaPredicted RBP15.09■□□□□ 0.01
CDK5RAP2-217ENST00000484546 ST5P78524 1137 aa15.09■□□□□ 0.01
CDK5RAP2-217ENST00000484546 COPS6Q7L5N1 327 aa15.09■□□□□ 0.01
CDK5RAP2-217ENST00000484546 NBPF5PQ86XG9 351 aaPredicted RBP15.09■□□□□ 0.01
CDK5RAP2-217ENST00000484546 CNBD1Q8NA66 436 aa15.09■□□□□ 0.01
CDK5RAP2-217ENST00000484546 XAGE3Q8WTP9 111 aa15.09■□□□□ 0.01
CDK5RAP2-217ENST00000484546 ANKRD36CQ5JPF3 1778 aa15.08■□□□□ 0.01
CDK5RAP2-217ENST00000484546 ARFGEF1Q9Y6D6 1849 aa15.08■□□□□ 0.01
CDK5RAP2-217ENST00000484546 E9PSI1 815 aa15.08■□□□□ 0
CDK5RAP2-217ENST00000484546 GRIN3BO60391 1043 aa15.08■□□□□ 0
CDK5RAP2-217ENST00000484546 KCNA3P22001 575 aa15.08■□□□□ 0
CDK5RAP2-217ENST00000484546 CHRNA5P30532 468 aa15.08■□□□□ 0
CDK5RAP2-217ENST00000484546 HSP90AB3PQ58FF7 597 aa15.08■□□□□ 0
CDK5RAP2-217ENST00000484546 GOLGB1Q14789 3259 aaKnown RBP15.07■□□□□ 0
CDK5RAP2-217ENST00000484546 FAM177BA6PVY3 158 aa15.07■□□□□ 0
CDK5RAP2-217ENST00000484546 EXOSC9Q06265 439 aaKnown RBP15.07■□□□□ 0
CDK5RAP2-217ENST00000484546 CCDC24Q8N4L8 307 aa15.07■□□□□ 0
CDK5RAP2-217ENST00000484546 TSPYL6Q8N831 410 aa15.07■□□□□ 0
CDK5RAP2-217ENST00000484546 TNRC6CQ9HCJ0 1690 aaKnown RBP15.06■□□□□ 0
CDK5RAP2-217ENST00000484546 UTRNP46939 3433 aa15.06■□□□□ 0
CDK5RAP2-217ENST00000484546 DDX58O95786 925 aaKnown RBP15.06■□□□□ 0
CDK5RAP2-217ENST00000484546 GPTP24298 496 aa15.06■□□□□ 0
CDK5RAP2-217ENST00000484546 YY1P25490 414 aa15.06■□□□□ 0
CDK5RAP2-217ENST00000484546 TPTE2Q6XPS3 522 aa15.06■□□□□ 0
CDK5RAP2-217ENST00000484546 NYXQ9GZU5 481 aa15.06■□□□□ 0
CDK5RAP2-217ENST00000484546 BCS1LQ9Y276 419 aa15.06■□□□□ 0
CDK5RAP2-217ENST00000484546 HNRNPUQ00839 825 aaKnown RBP eCLIP15.05■□□□□ -0
CDK5RAP2-217ENST00000484546 GIGYF2Q6Y7W6 1299 aaKnown RBP15.05■□□□□ -0
CDK5RAP2-217ENST00000484546 ANKRD13DQ6ZTN6 518 aa15.05■□□□□ -0
CDK5RAP2-217ENST00000484546 RIC3Q7Z5B4 369 aa15.05■□□□□ -0
CDK5RAP2-217ENST00000484546 C2CD5Q86YS7 1000 aa15.05■□□□□ -0
CDK5RAP2-217ENST00000484546 PLBD2Q8NHP8 589 aa15.05■□□□□ -0
CDK5RAP2-217ENST00000484546 BRIP1Q9BX63 1249 aa15.05■□□□□ -0
CDK5RAP2-217ENST00000484546 PIM2Q9P1W9 311 aa15.05■□□□□ -0
CDK5RAP2-217ENST00000484546 UBN2Q6ZU65 1347 aa15.05■□□□□ -0
CDK5RAP2-217ENST00000484546 ZNF521Q96K83 1311 aa15.05■□□□□ -0
CDK5RAP2-217ENST00000484546 IBTKQ9P2D0 1353 aaPredicted RBP15.05■□□□□ -0
CDK5RAP2-217ENST00000484546 ARFGEF2Q9Y6D5 1785 aa15.04■□□□□ -0
CDK5RAP2-217ENST00000484546 ABCC12Q96J65 1359 aa15.04■□□□□ -0
CDK5RAP2-217ENST00000484546 TCERG1O14776 1098 aaKnown RBP15.04■□□□□ -0
CDK5RAP2-217ENST00000484546 PDE6BP35913 854 aa15.04■□□□□ -0
CDK5RAP2-217ENST00000484546 PARP10Q53GL7 1025 aa15.04■□□□□ -0
CDK5RAP2-217ENST00000484546 PPP1R42Q7Z4L9 355 aa15.04■□□□□ -0
CDK5RAP2-217ENST00000484546 ZNF34Q8IZ26 560 aa15.04■□□□□ -0
CDK5RAP2-217ENST00000484546 SPINK5Q9NQ38 1064 aaPredicted RBP15.04■□□□□ -0
CDK5RAP2-217ENST00000484546 H0YIN7 160 aa15.03■□□□□ -0
CDK5RAP2-217ENST00000484546 DALRD3Q5D0E6 543 aaKnown RBP15.03■□□□□ -0
CDK5RAP2-217ENST00000484546 PDZRN3Q9UPQ7 1066 aa15.03■□□□□ -0
CDK5RAP2-217ENST00000484546 SLC4A2P04920 1241 aa15.02■□□□□ -0
CDK5RAP2-217ENST00000484546 PHAXQ9H814 394 aaKnown RBP15.02■□□□□ -0
CDK5RAP2-217ENST00000484546 RIC1Q4ADV7 1423 aa15.01□□□□□ -0.01
CDK5RAP2-217ENST00000484546 NTSR2O95665 410 aa15.01□□□□□ -0.01
CDK5RAP2-217ENST00000484546 SLFN5Q08AF3 891 aa15.01□□□□□ -0.01
CDK5RAP2-217ENST00000484546 TCIRG1Q13488 830 aa15.01□□□□□ -0.01
CDK5RAP2-217ENST00000484546 SUSD4Q5VX71 490 aa15.01□□□□□ -0.01
CDK5RAP2-217ENST00000484546 UTP14AQ9BVJ6 771 aaKnown RBP15.01□□□□□ -0.01
CDK5RAP2-217ENST00000484546 CACNA1SQ13698 1873 aa15.01□□□□□ -0.01
CDK5RAP2-217ENST00000484546 VAMP4O75379 141 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms