RNA–Protein interactions for RNA: ENST00000484254.1

CNTNAP3B-208, Transcript of contactin associated protein like 3B, human

TSL 3

Gene CNTNAP3B, Length 742 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNTNAP3B-208	ENST00000484254	LRP10	Q7Z4F1	713 aa		28.78	■■■□□ 2.2
CNTNAP3B-208	ENST00000484254	NECTIN2	Q92692	538 aa		28.78	■■■□□ 2.2
CNTNAP3B-208	ENST00000484254	MAP3K15	Q6ZN16	1313 aa		28.77	■■■□□ 2.2
CNTNAP3B-208	ENST00000484254	HLF	Q16534	295 aa		28.77	■■■□□ 2.2
CNTNAP3B-208	ENST00000484254	PROSER3	Q2NL68	480 aa		28.77	■■■□□ 2.2
CNTNAP3B-208	ENST00000484254	DUSP27	Q5VZP5	1158 aa		28.77	■■■□□ 2.2
CNTNAP3B-208	ENST00000484254	WWC3	Q9ULE0	1092 aa		28.76	■■■□□ 2.19
CNTNAP3B-208	ENST00000484254	IL16	Q14005	1332 aa		28.75	■■■□□ 2.19
CNTNAP3B-208	ENST00000484254	KCNA3	P22001	575 aa		28.75	■■■□□ 2.19
CNTNAP3B-208	ENST00000484254	HDGFL1	Q5TGJ6	251 aa		28.75	■■■□□ 2.19
CNTNAP3B-208	ENST00000484254	DDX21	Q9NR30	783 aa	Known RBP eCLIP	28.75	■■■□□ 2.19
CNTNAP3B-208	ENST00000484254	ANXA1	P04083	346 aa		28.74	■■■□□ 2.19
CNTNAP3B-208	ENST00000484254	PRR5L	Q6MZQ0	368 aa		28.74	■■■□□ 2.19
CNTNAP3B-208	ENST00000484254	NIP7	Q9Y221	180 aa	Known RBP eCLIP	28.74	■■■□□ 2.19
CNTNAP3B-208	ENST00000484254	YY1	P25490	414 aa		28.73	■■■□□ 2.19
CNTNAP3B-208	ENST00000484254	GOLGB1	Q14789	3259 aa	Known RBP	28.73	■■■□□ 2.19
CNTNAP3B-208	ENST00000484254	BRCA1	P38398	1863 aa	Known RBP	28.72	■■■□□ 2.19
CNTNAP3B-208	ENST00000484254	CCER2	I3L3R5	266 aa		28.72	■■■□□ 2.19
CNTNAP3B-208	ENST00000484254	CHRNA5	P30532	468 aa		28.72	■■■□□ 2.19
CNTNAP3B-208	ENST00000484254	CNBD1	Q8NA66	436 aa		28.72	■■■□□ 2.19
CNTNAP3B-208	ENST00000484254	ZBTB3	Q9H5J0	574 aa		28.72	■■■□□ 2.19
CNTNAP3B-208	ENST00000484254	CHPF2	Q9P2E5	772 aa		28.72	■■■□□ 2.19
CNTNAP3B-208	ENST00000484254	SALL2	Q9Y467	1007 aa	Predicted RBP	28.72	■■■□□ 2.19
CNTNAP3B-208	ENST00000484254	CHD4	Q14839	1912 aa		28.72	■■■□□ 2.19
CNTNAP3B-208	ENST00000484254	NUP98	P52948	1817 aa		28.71	■■■□□ 2.19
CNTNAP3B-208	ENST00000484254	NBPF5P	Q86XG9	351 aa	Predicted RBP	28.71	■■■□□ 2.19
CNTNAP3B-208	ENST00000484254	WDR63	Q8IWG1	891 aa		28.71	■■■□□ 2.19
CNTNAP3B-208	ENST00000484254	PIM2	Q9P1W9	311 aa		28.71	■■■□□ 2.19
CNTNAP3B-208	ENST00000484254	C8orf58	Q8NAV2	365 aa		28.7	■■■□□ 2.18
CNTNAP3B-208	ENST00000484254	TSR2	Q969E8	191 aa	Known RBP	28.7	■■■□□ 2.18
CNTNAP3B-208	ENST00000484254	BRIP1	Q9BX63	1249 aa		28.7	■■■□□ 2.18
CNTNAP3B-208	ENST00000484254	DBF4	Q9UBU7	674 aa	Predicted RBP	28.7	■■■□□ 2.18
CNTNAP3B-208	ENST00000484254	BCS1L	Q9Y276	419 aa		28.7	■■■□□ 2.18
CNTNAP3B-208	ENST00000484254	ATP10D	Q9P241	1426 aa		28.69	■■■□□ 2.18
CNTNAP3B-208	ENST00000484254	UTRN	P46939	3433 aa		28.69	■■■□□ 2.18
CNTNAP3B-208	ENST00000484254	NPHP1	O15259	732 aa		28.69	■■■□□ 2.18
CNTNAP3B-208	ENST00000484254	COPS6	Q7L5N1	327 aa		28.69	■■■□□ 2.18
CNTNAP3B-208	ENST00000484254	XAGE3	Q8WTP9	111 aa		28.69	■■■□□ 2.18
CNTNAP3B-208	ENST00000484254	ANKRD31	Q8N7Z5	1873 aa		28.68	■■■□□ 2.18
CNTNAP3B-208	ENST00000484254	ELL2	O00472	640 aa	Predicted RBP	28.68	■■■□□ 2.18
CNTNAP3B-208	ENST00000484254	ST5	P78524	1137 aa		28.68	■■■□□ 2.18
CNTNAP3B-208	ENST00000484254	GIGYF2	Q6Y7W6	1299 aa	Known RBP	28.68	■■■□□ 2.18
CNTNAP3B-208	ENST00000484254	CCDC24	Q8N4L8	307 aa		28.68	■■■□□ 2.18
CNTNAP3B-208	ENST00000484254	PDE6B	P35913	854 aa		28.67	■■■□□ 2.18
CNTNAP3B-208	ENST00000484254	TPTE2	Q6XPS3	522 aa		28.67	■■■□□ 2.18
CNTNAP3B-208	ENST00000484254	C2CD5	Q86YS7	1000 aa		28.67	■■■□□ 2.18
CNTNAP3B-208	ENST00000484254	PDZRN3	Q9UPQ7	1066 aa		28.67	■■■□□ 2.18
CNTNAP3B-208	ENST00000484254		H0YIN7	160 aa		28.66	■■■□□ 2.18
CNTNAP3B-208	ENST00000484254	AIMP1	Q12904	312 aa	Known RBP	28.66	■■■□□ 2.18
CNTNAP3B-208	ENST00000484254	DALRD3	Q5D0E6	543 aa	Known RBP	28.66	■■■□□ 2.18
CNTNAP3B-208	ENST00000484254	ZNF34	Q8IZ26	560 aa		28.65	■■■□□ 2.18
CNTNAP3B-208	ENST00000484254	CHMP4A	Q9BY43	222 aa		28.65	■■■□□ 2.18
CNTNAP3B-208	ENST00000484254	HYPK	Q9NX55	129 aa		28.65	■■■□□ 2.18
CNTNAP3B-208	ENST00000484254	DLEC1	Q9Y238	1755 aa		28.65	■■■□□ 2.18
CNTNAP3B-208	ENST00000484254	DIEXF	Q68CQ4	756 aa	Known RBP	28.64	■■■□□ 2.18
CNTNAP3B-208	ENST00000484254	TSPYL6	Q8N831	410 aa		28.64	■■■□□ 2.18
CNTNAP3B-208	ENST00000484254	FAM177B	A6PVY3	158 aa		28.63	■■■□□ 2.17
CNTNAP3B-208	ENST00000484254	ARFGEF1	Q9Y6D6	1849 aa		28.62	■■■□□ 2.17
CNTNAP3B-208	ENST00000484254	GPT	P24298	496 aa		28.62	■■■□□ 2.17
CNTNAP3B-208	ENST00000484254	NYX	Q9GZU5	481 aa		28.62	■■■□□ 2.17
CNTNAP3B-208	ENST00000484254	UBN2	Q6ZU65	1347 aa		28.62	■■■□□ 2.17
CNTNAP3B-208	ENST00000484254	FANCI	Q9NVI1	1328 aa		28.61	■■■□□ 2.17
CNTNAP3B-208	ENST00000484254	IBTK	Q9P2D0	1353 aa	Predicted RBP	28.61	■■■□□ 2.17
CNTNAP3B-208	ENST00000484254	HSP90AB3P	Q58FF7	597 aa		28.6	■■■□□ 2.17
CNTNAP3B-208	ENST00000484254	CCDC30	Q5VVM6	783 aa		28.6	■■■□□ 2.17
CNTNAP3B-208	ENST00000484254	GTF2E1	P29083	439 aa	Predicted RBP	28.59	■■■□□ 2.17
CNTNAP3B-208	ENST00000484254	PARP10	Q53GL7	1025 aa		28.59	■■■□□ 2.17
CNTNAP3B-208	ENST00000484254	SUSD4	Q5VX71	490 aa		28.59	■■■□□ 2.17
CNTNAP3B-208	ENST00000484254	TTLL6	Q8N841	843 aa		28.59	■■■□□ 2.17
CNTNAP3B-208	ENST00000484254	PLBD2	Q8NHP8	589 aa		28.59	■■■□□ 2.17
CNTNAP3B-208	ENST00000484254	COL11A2	P13942	1736 aa	Predicted RBP	28.59	■■■□□ 2.17
CNTNAP3B-208	ENST00000484254	TWISTNB	Q3B726	338 aa	Predicted RBP	28.58	■■■□□ 2.17
CNTNAP3B-208	ENST00000484254	ANKRD13D	Q6ZTN6	518 aa		28.58	■■■□□ 2.17
CNTNAP3B-208	ENST00000484254	TCIRG1	Q13488	830 aa		28.57	■■■□□ 2.16
CNTNAP3B-208	ENST00000484254	ARHGAP27	Q6ZUM4	889 aa		28.57	■■■□□ 2.16
CNTNAP3B-208	ENST00000484254	ZNF622	Q969S3	477 aa	Known RBP eCLIP	28.57	■■■□□ 2.16
CNTNAP3B-208	ENST00000484254	SPINK5	Q9NQ38	1064 aa	Predicted RBP	28.57	■■■□□ 2.16
CNTNAP3B-208	ENST00000484254	ZNF521	Q96K83	1311 aa		28.57	■■■□□ 2.16
CNTNAP3B-208	ENST00000484254	KLRG2	A4D1S0	409 aa	Predicted RBP	28.56	■■■□□ 2.16
CNTNAP3B-208	ENST00000484254	SRGN	P10124	158 aa		28.56	■■■□□ 2.16
CNTNAP3B-208	ENST00000484254	GOLGA2	Q08379	1002 aa		28.56	■■■□□ 2.16
CNTNAP3B-208	ENST00000484254	ANKRD36C	Q5JPF3	1778 aa		28.56	■■■□□ 2.16
CNTNAP3B-208	ENST00000484254	PPP1R42	Q7Z4L9	355 aa		28.56	■■■□□ 2.16
CNTNAP3B-208	ENST00000484254	NTSR2	O95665	410 aa		28.55	■■■□□ 2.16
CNTNAP3B-208	ENST00000484254	ERFE	Q4G0M1	354 aa		28.55	■■■□□ 2.16
CNTNAP3B-208	ENST00000484254	STYK1	Q6J9G0	422 aa		28.55	■■■□□ 2.16
CNTNAP3B-208	ENST00000484254	NUTM1	Q86Y26	1132 aa		28.55	■■■□□ 2.16
CNTNAP3B-208	ENST00000484254	MYH16	Q9H6N6	1097 aa		28.55	■■■□□ 2.16
CNTNAP3B-208	ENST00000484254	PHAX	Q9H814	394 aa	Known RBP	28.55	■■■□□ 2.16
CNTNAP3B-208	ENST00000484254	MASTL	Q96GX5	879 aa		28.54	■■■□□ 2.16
CNTNAP3B-208	ENST00000484254	ABCC12	Q96J65	1359 aa		28.53	■■■□□ 2.16
CNTNAP3B-208	ENST00000484254	MIER1	Q8N108	512 aa		28.53	■■■□□ 2.16
CNTNAP3B-208	ENST00000484254	UTP14A	Q9BVJ6	771 aa	Known RBP	28.53	■■■□□ 2.16
CNTNAP3B-208	ENST00000484254	EXOSC9	Q06265	439 aa	Known RBP	28.52	■■■□□ 2.16
CNTNAP3B-208	ENST00000484254	NLRP10	Q86W26	655 aa		28.52	■■■□□ 2.16
CNTNAP3B-208	ENST00000484254	CNKSR1	Q969H4	720 aa		28.52	■■■□□ 2.16
CNTNAP3B-208	ENST00000484254	STK31	Q9BXU1	1019 aa		28.52	■■■□□ 2.16
CNTNAP3B-208	ENST00000484254	RIC1	Q4ADV7	1423 aa		28.52	■■■□□ 2.16
CNTNAP3B-208	ENST00000484254	NPR1	P16066	1061 aa		28.51	■■■□□ 2.15
CNTNAP3B-208	ENST00000484254	RNF123	Q5XPI4	1314 aa		28.5	■■■□□ 2.15

Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms