RNA–Protein interactions for RNA: ENST00000483142.5

HDAC9-224, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 305 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-224ENST00000483142 C8orf58Q8NAV2 365 aa5.92□□□□□ -1.46
HDAC9-224ENST00000483142 CAMKK2Q96RR4 588 aa5.92□□□□□ -1.46
HDAC9-224ENST00000483142 TEX13AQ9BXU3 409 aaPredicted RBP5.92□□□□□ -1.46
HDAC9-224ENST00000483142 CHMP4AQ9BY43 222 aa5.92□□□□□ -1.46
HDAC9-224ENST00000483142 KIF16BQ96L93 1317 aa5.92□□□□□ -1.46
HDAC9-224ENST00000483142 LRP5O75197 1615 aa5.92□□□□□ -1.46
HDAC9-224ENST00000483142 COL15A1P39059 1388 aa5.92□□□□□ -1.46
HDAC9-224ENST00000483142 RIC1Q4ADV7 1423 aa5.91□□□□□ -1.46
HDAC9-224ENST00000483142 KAT6BQ8WYB5 2073 aa5.91□□□□□ -1.46
HDAC9-224ENST00000483142 NUP98P52948 1817 aa5.91□□□□□ -1.46
HDAC9-224ENST00000483142 CYP19A1P11511 503 aaPredicted RBP5.91□□□□□ -1.46
HDAC9-224ENST00000483142 BAG6P46379 1132 aa5.91□□□□□ -1.46
HDAC9-224ENST00000483142 PDIA6Q15084 440 aa5.91□□□□□ -1.46
HDAC9-224ENST00000483142 TXNRD1Q16881 649 aa5.91□□□□□ -1.46
HDAC9-224ENST00000483142 RC3H1Q5TC82 1133 aaKnown RBP5.91□□□□□ -1.46
HDAC9-224ENST00000483142 DNAJC10Q8IXB1 793 aa5.91□□□□□ -1.46
HDAC9-224ENST00000483142 SYTL4Q96C24 671 aaPredicted RBP5.91□□□□□ -1.46
HDAC9-224ENST00000483142 SALL2Q9Y467 1007 aaPredicted RBP5.91□□□□□ -1.46
HDAC9-224ENST00000483142 SENP3-EIF4A1A0A087X0R7 540 aa5.9□□□□□ -1.46
HDAC9-224ENST00000483142 PRAMEF22A3QJZ6 481 aa5.9□□□□□ -1.46
HDAC9-224ENST00000483142 NBPF26B4DH59 902 aa5.9□□□□□ -1.46
HDAC9-224ENST00000483142 IL6STP40189 918 aaPredicted RBP5.9□□□□□ -1.46
HDAC9-224ENST00000483142 RARSP54136 660 aaKnown RBP5.9□□□□□ -1.46
HDAC9-224ENST00000483142 HDGFL1Q5TGJ6 251 aa5.9□□□□□ -1.46
HDAC9-224ENST00000483142 NBPF14Q5TI25 921 aa5.9□□□□□ -1.46
HDAC9-224ENST00000483142 NBPF10Q6P3W6 841 aaKnown RBP5.9□□□□□ -1.46
HDAC9-224ENST00000483142 NBPF15Q8N660 670 aa5.9□□□□□ -1.46
HDAC9-224ENST00000483142 EFCAB3Q8N7B9 438 aa5.9□□□□□ -1.46
HDAC9-224ENST00000483142 LINC00116Q8NCU8 138 aa5.9□□□□□ -1.46
HDAC9-224ENST00000483142 UPF1Q92900 1129 aaKnown RBP eCLIP5.9□□□□□ -1.46
HDAC9-224ENST00000483142 MS4A4AQ96JQ5 239 aa5.9□□□□□ -1.46
HDAC9-224ENST00000483142 YTHDC1Q96MU7 727 aaKnown RBP5.9□□□□□ -1.46
HDAC9-224ENST00000483142 PHF12Q96QT6 1004 aa5.9□□□□□ -1.46
HDAC9-224ENST00000483142 DDX21Q9NR30 783 aaKnown RBP eCLIP5.9□□□□□ -1.46
HDAC9-224ENST00000483142 LRRC4BQ9NT99 713 aa5.9□□□□□ -1.46
HDAC9-224ENST00000483142 CCDC87Q9NVE4 849 aa5.9□□□□□ -1.46
HDAC9-224ENST00000483142 MIS18AQ9NYP9 233 aa5.9□□□□□ -1.46
HDAC9-224ENST00000483142 CCNL1Q9UK58 526 aaPredicted RBP5.9□□□□□ -1.46
HDAC9-224ENST00000483142 TRPC6Q9Y210 931 aa5.9□□□□□ -1.46
HDAC9-224ENST00000483142 ZBTB1Q9Y2K1 713 aa5.9□□□□□ -1.46
HDAC9-224ENST00000483142 ABCC4O15439 1325 aa5.9□□□□□ -1.47
HDAC9-224ENST00000483142 PTPRCP08575 1304 aa5.9□□□□□ -1.47
HDAC9-224ENST00000483142 ADCY9O60503 1353 aa5.9□□□□□ -1.47
HDAC9-224ENST00000483142 KIF13BQ9NQT8 1826 aa5.9□□□□□ -1.47
HDAC9-224ENST00000483142 KIAA1551Q9HCM1 1747 aa5.89□□□□□ -1.47
HDAC9-224ENST00000483142 DLEC1Q9Y238 1755 aa5.89□□□□□ -1.47
HDAC9-224ENST00000483142 SSFA2P28290 1259 aa5.89□□□□□ -1.47
HDAC9-224ENST00000483142 CRKLP46109 303 aaKnown RBP5.89□□□□□ -1.47
HDAC9-224ENST00000483142 EIF5P55010 431 aaKnown RBP5.89□□□□□ -1.47
HDAC9-224ENST00000483142 CCDC30Q5VVM6 783 aa5.89□□□□□ -1.47
HDAC9-224ENST00000483142 INTS5Q6P9B9 1019 aaKnown RBP5.89□□□□□ -1.47
HDAC9-224ENST00000483142 ILDR2Q71H61 639 aa5.89□□□□□ -1.47
HDAC9-224ENST00000483142 MRPL50Q8N5N7 158 aaKnown RBP5.89□□□□□ -1.47
HDAC9-224ENST00000483142 KCNV2Q8TDN2 545 aa5.89□□□□□ -1.47
HDAC9-224ENST00000483142 ANO8Q9HCE9 1232 aaPredicted RBP5.89□□□□□ -1.47
HDAC9-224ENST00000483142 DBF4Q9UBU7 674 aaPredicted RBP5.89□□□□□ -1.47
HDAC9-224ENST00000483142 USP16Q9Y5T5 823 aa5.89□□□□□ -1.47
HDAC9-224ENST00000483142 AFDNP55196 1824 aaKnown RBP5.89□□□□□ -1.47
HDAC9-224ENST00000483142 DDX60Q8IY21 1712 aaKnown RBP5.88□□□□□ -1.47
HDAC9-224ENST00000483142 C19orf67A6NJJ6 358 aa5.88□□□□□ -1.47
HDAC9-224ENST00000483142 PTCD1O75127 700 aaKnown RBP5.88□□□□□ -1.47
HDAC9-224ENST00000483142 RPS6KA4O75676 772 aa5.88□□□□□ -1.47
HDAC9-224ENST00000483142 STARD3NLO95772 234 aa5.88□□□□□ -1.47
HDAC9-224ENST00000483142 APBA3O96018 575 aa5.88□□□□□ -1.47
HDAC9-224ENST00000483142 ATP6V1AP38606 617 aa5.88□□□□□ -1.47
HDAC9-224ENST00000483142 ZNF827Q17R98 1081 aa5.88□□□□□ -1.47
HDAC9-224ENST00000483142 PROSER3Q2NL68 480 aa5.88□□□□□ -1.47
HDAC9-224ENST00000483142 SSH1Q8WYL5 1049 aa5.88□□□□□ -1.47
HDAC9-224ENST00000483142 ARHGAP45Q92619 1136 aa5.88□□□□□ -1.47
HDAC9-224ENST00000483142 CHPF2Q9P2E5 772 aa5.88□□□□□ -1.47
HDAC9-224ENST00000483142 RCAN3Q9UKA8 241 aa5.88□□□□□ -1.47
HDAC9-224ENST00000483142 LAS1LQ9Y4W2 734 aaKnown RBP5.88□□□□□ -1.47
HDAC9-224ENST00000483142 TNRC6CQ9HCJ0 1690 aaKnown RBP5.88□□□□□ -1.47
HDAC9-224ENST00000483142 CD44P16070 742 aaKnown RBP5.87□□□□□ -1.47
HDAC9-224ENST00000483142 FLIIQ13045 1269 aa5.87□□□□□ -1.47
HDAC9-224ENST00000483142 SF3B2Q13435 895 aaKnown RBP5.87□□□□□ -1.47
HDAC9-224ENST00000483142 NBR1Q14596 966 aa5.87□□□□□ -1.47
HDAC9-224ENST00000483142 EZH2Q15910 746 aaKnown RBP5.87□□□□□ -1.47
HDAC9-224ENST00000483142 AMIGO3Q86WK7 504 aa5.87□□□□□ -1.47
HDAC9-224ENST00000483142 STK31Q9BXU1 1019 aa5.87□□□□□ -1.47
HDAC9-224ENST00000483142 SMC4Q9NTJ3 1288 aa5.87□□□□□ -1.47
HDAC9-224ENST00000483142 HYPKQ9NX55 129 aa5.87□□□□□ -1.47
HDAC9-224ENST00000483142 PNPLA7Q6ZV29 1317 aa5.87□□□□□ -1.47
HDAC9-224ENST00000483142 USP42Q9H9J4 1324 aaKnown RBP5.87□□□□□ -1.47
HDAC9-224ENST00000483142 MYH3P11055 1940 aa5.86□□□□□ -1.47
HDAC9-224ENST00000483142 ANKRD31Q8N7Z5 1873 aa5.86□□□□□ -1.47
HDAC9-224ENST00000483142 LRRC37AA6NMS7 1700 aa5.86□□□□□ -1.47
HDAC9-224ENST00000483142 COL11A2P13942 1736 aaPredicted RBP5.86□□□□□ -1.47
HDAC9-224ENST00000483142 C10orf71Q711Q0 1435 aa5.86□□□□□ -1.47
HDAC9-224ENST00000483142 MAP3K15Q6ZN16 1313 aa5.86□□□□□ -1.47
HDAC9-224ENST00000483142 A0A087WZG4 1122 aa5.86□□□□□ -1.47
HDAC9-224ENST00000483142 ERVV-1B6SEH8 477 aa5.86□□□□□ -1.47
HDAC9-224ENST00000483142 CAMTA2O94983 1202 aa5.86□□□□□ -1.47
HDAC9-224ENST00000483142 RRP1P56182 461 aaKnown RBP5.86□□□□□ -1.47
HDAC9-224ENST00000483142 EN1Q05925 392 aaPredicted RBP5.86□□□□□ -1.47
HDAC9-224ENST00000483142 DEFB132Q7Z7B7 95 aa5.86□□□□□ -1.47
HDAC9-224ENST00000483142 API5Q9BZZ5 524 aaKnown RBP5.86□□□□□ -1.47
HDAC9-224ENST00000483142 A0A1B0GUL6 1792 aa5.85□□□□□ -1.47
HDAC9-224ENST00000483142 ELL2O00472 640 aaPredicted RBP5.85□□□□□ -1.47
HDAC9-224ENST00000483142 GNPATO15228 680 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms