RNA–Protein interactions for RNA: ENST00000481738.1

LINC00544-202, long intergenic non-protein coding RNA 544, humanhuman

TSL 3 BASIC

Gene LINC00544, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-202ENST00000481738 TTLL7Q6ZT98 887 aa11.74□□□□□ -0.53
LINC00544-202ENST00000481738 CNBD1Q8NA66 436 aa11.74□□□□□ -0.53
LINC00544-202ENST00000481738 NECTIN2Q92692 538 aa11.74□□□□□ -0.53
LINC00544-202ENST00000481738 NIP7Q9Y221 180 aaKnown RBP eCLIP11.74□□□□□ -0.53
LINC00544-202ENST00000481738 ERBB4Q15303 1308 aa11.74□□□□□ -0.53
LINC00544-202ENST00000481738 ARFGEF1Q9Y6D6 1849 aa11.74□□□□□ -0.53
LINC00544-202ENST00000481738 SENP3-EIF4A1A0A087X0R7 540 aa11.73□□□□□ -0.53
LINC00544-202ENST00000481738 FAM177BA6PVY3 158 aa11.73□□□□□ -0.53
LINC00544-202ENST00000481738 H0YIN7 160 aa11.73□□□□□ -0.53
LINC00544-202ENST00000481738 RGL2O15211 777 aa11.73□□□□□ -0.53
LINC00544-202ENST00000481738 ANXA1P04083 346 aa11.73□□□□□ -0.53
LINC00544-202ENST00000481738 PDE6BP35913 854 aa11.73□□□□□ -0.53
LINC00544-202ENST00000481738 ST5P78524 1137 aa11.73□□□□□ -0.53
LINC00544-202ENST00000481738 PDIA6Q15084 440 aa11.73□□□□□ -0.53
LINC00544-202ENST00000481738 MAP3K15Q6ZN16 1313 aa11.73□□□□□ -0.53
LINC00544-202ENST00000481738 NBPF5PQ86XG9 351 aaPredicted RBP11.73□□□□□ -0.53
LINC00544-202ENST00000481738 CFAP44Q96MT7 982 aa11.73□□□□□ -0.53
LINC00544-202ENST00000481738 BRIP1Q9BX63 1249 aa11.73□□□□□ -0.53
LINC00544-202ENST00000481738 ZBTB3Q9H5J0 574 aa11.73□□□□□ -0.53
LINC00544-202ENST00000481738 DLEC1Q9Y238 1755 aa11.73□□□□□ -0.53
LINC00544-202ENST00000481738 ERVV-1B6SEH8 477 aa11.72□□□□□ -0.53
LINC00544-202ENST00000481738 PROSER3Q2NL68 480 aa11.72□□□□□ -0.53
LINC00544-202ENST00000481738 ZNF622Q969S3 477 aaKnown RBP eCLIP11.72□□□□□ -0.53
LINC00544-202ENST00000481738 MBIPQ9NS73 344 aa11.72□□□□□ -0.53
LINC00544-202ENST00000481738 ATP10DQ9P241 1426 aa11.71□□□□□ -0.53
LINC00544-202ENST00000481738 ZNF853P0CG23 659 aa11.71□□□□□ -0.53
LINC00544-202ENST00000481738 GNAI1P63096 354 aa11.71□□□□□ -0.53
LINC00544-202ENST00000481738 CALD1Q05682 793 aaKnown RBP11.71□□□□□ -0.53
LINC00544-202ENST00000481738 TPTE2Q6XPS3 522 aa11.71□□□□□ -0.53
LINC00544-202ENST00000481738 LRP10Q7Z4F1 713 aa11.71□□□□□ -0.53
LINC00544-202ENST00000481738 TTLL6Q8N841 843 aa11.71□□□□□ -0.53
LINC00544-202ENST00000481738 IFT57Q9NWB7 429 aa11.71□□□□□ -0.53
LINC00544-202ENST00000481738 PDZRN3Q9UPQ7 1066 aa11.71□□□□□ -0.53
LINC00544-202ENST00000481738 NUP98P52948 1817 aa11.71□□□□□ -0.54
LINC00544-202ENST00000481738 COL11A2P13942 1736 aaPredicted RBP11.71□□□□□ -0.54
LINC00544-202ENST00000481738 ADCY9O60503 1353 aa11.7□□□□□ -0.54
LINC00544-202ENST00000481738 GPTP24298 496 aa11.7□□□□□ -0.54
LINC00544-202ENST00000481738 AIMP1Q12904 312 aaKnown RBP11.7□□□□□ -0.54
LINC00544-202ENST00000481738 HDGFL1Q5TGJ6 251 aa11.7□□□□□ -0.54
LINC00544-202ENST00000481738 DUSP27Q5VZP5 1158 aa11.7□□□□□ -0.54
LINC00544-202ENST00000481738 HOXB7P09629 217 aa11.69□□□□□ -0.54
LINC00544-202ENST00000481738 GTF2E1P29083 439 aaPredicted RBP11.69□□□□□ -0.54
LINC00544-202ENST00000481738 GIGYF2Q6Y7W6 1299 aaKnown RBP11.69□□□□□ -0.54
LINC00544-202ENST00000481738 COPS6Q7L5N1 327 aa11.69□□□□□ -0.54
LINC00544-202ENST00000481738 ZNF526Q8TF50 670 aaPredicted RBP11.69□□□□□ -0.54
LINC00544-202ENST00000481738 XAGE3Q8WTP9 111 aa11.69□□□□□ -0.54
LINC00544-202ENST00000481738 DDX21Q9NR30 783 aaKnown RBP eCLIP11.69□□□□□ -0.54
LINC00544-202ENST00000481738 CHPF2Q9P2E5 772 aa11.69□□□□□ -0.54
LINC00544-202ENST00000481738 UBN2Q6ZU65 1347 aa11.68□□□□□ -0.54
LINC00544-202ENST00000481738 ELL2O00472 640 aaPredicted RBP11.68□□□□□ -0.54
LINC00544-202ENST00000481738 SRGNP10124 158 aa11.68□□□□□ -0.54
LINC00544-202ENST00000481738 C9orf131Q5VYM1 1079 aa11.68□□□□□ -0.54
LINC00544-202ENST00000481738 NUTM1Q86Y26 1132 aa11.68□□□□□ -0.54
LINC00544-202ENST00000481738 ZNF34Q8IZ26 560 aa11.68□□□□□ -0.54
LINC00544-202ENST00000481738 ZNF219Q9P2Y4 722 aaPredicted RBP11.68□□□□□ -0.54
LINC00544-202ENST00000481738 RASSF7Q02833 373 aa11.67□□□□□ -0.54
LINC00544-202ENST00000481738 CCDC27Q2M243 656 aa11.67□□□□□ -0.54
LINC00544-202ENST00000481738 SUSD4Q5VX71 490 aa11.67□□□□□ -0.54
LINC00544-202ENST00000481738 STYK1Q6J9G0 422 aa11.67□□□□□ -0.54
LINC00544-202ENST00000481738 WWC1Q8IX03 1113 aa11.67□□□□□ -0.54
LINC00544-202ENST00000481738 FAM9BQ8IZU0 186 aa11.67□□□□□ -0.54
LINC00544-202ENST00000481738 CNKSR1Q969H4 720 aa11.67□□□□□ -0.54
LINC00544-202ENST00000481738 MASTLQ96GX5 879 aa11.67□□□□□ -0.54
LINC00544-202ENST00000481738 NYXQ9GZU5 481 aa11.67□□□□□ -0.54
LINC00544-202ENST00000481738 GPBP1L1Q9HC44 474 aaPredicted RBP11.67□□□□□ -0.54
LINC00544-202ENST00000481738 SALL2Q9Y467 1007 aaPredicted RBP11.67□□□□□ -0.54
LINC00544-202ENST00000481738 CACNA1SQ13698 1873 aa11.67□□□□□ -0.54
LINC00544-202ENST00000481738 ABCC12Q96J65 1359 aa11.67□□□□□ -0.54
LINC00544-202ENST00000481738 C21orf2O43822 256 aa11.66□□□□□ -0.54
LINC00544-202ENST00000481738 ERFEQ4G0M1 354 aa11.66□□□□□ -0.54
LINC00544-202ENST00000481738 C8orf58Q8NAV2 365 aa11.66□□□□□ -0.54
LINC00544-202ENST00000481738 RNF181Q9P0P0 153 aa11.66□□□□□ -0.54
LINC00544-202ENST00000481738 DBF4Q9UBU7 674 aaPredicted RBP11.66□□□□□ -0.54
LINC00544-202ENST00000481738 IBTKQ9P2D0 1353 aaPredicted RBP11.66□□□□□ -0.54
LINC00544-202ENST00000481738 TNRC6CQ9HCJ0 1690 aaKnown RBP11.65□□□□□ -0.54
LINC00544-202ENST00000481738 SLX4Q8IY92 1834 aa11.65□□□□□ -0.54
LINC00544-202ENST00000481738 KLRG2A4D1S0 409 aaPredicted RBP11.65□□□□□ -0.54
LINC00544-202ENST00000481738 NTSR2O95665 410 aa11.65□□□□□ -0.54
LINC00544-202ENST00000481738 NPR1P16066 1061 aa11.65□□□□□ -0.54
LINC00544-202ENST00000481738 PARP10Q53GL7 1025 aa11.65□□□□□ -0.54
LINC00544-202ENST00000481738 HSP90AB3PQ58FF7 597 aa11.65□□□□□ -0.54
LINC00544-202ENST00000481738 PRPF40BQ6NWY9 871 aaKnown RBP11.65□□□□□ -0.54
LINC00544-202ENST00000481738 PPP1R42Q7Z4L9 355 aa11.65□□□□□ -0.54
LINC00544-202ENST00000481738 TSR2Q969E8 191 aaKnown RBP11.65□□□□□ -0.54
LINC00544-202ENST00000481738 ANKRD36CQ5JPF3 1778 aa11.64□□□□□ -0.55
LINC00544-202ENST00000481738 SBF1O95248 1867 aa11.64□□□□□ -0.55
LINC00544-202ENST00000481738 NFKBIEO00221 500 aa11.64□□□□□ -0.55
LINC00544-202ENST00000481738 NCBP3Q53F19 620 aaKnown RBP11.64□□□□□ -0.55
LINC00544-202ENST00000481738 PLBD2Q8NHP8 589 aa11.64□□□□□ -0.55
LINC00544-202ENST00000481738 HYPKQ9NX55 129 aa11.64□□□□□ -0.55
LINC00544-202ENST00000481738 ARFGEF2Q9Y6D5 1785 aa11.64□□□□□ -0.55
LINC00544-202ENST00000481738 LMNB1P20700 586 aa11.63□□□□□ -0.55
LINC00544-202ENST00000481738 PRELPP51888 382 aa11.63□□□□□ -0.55
LINC00544-202ENST00000481738 TCIRG1Q13488 830 aa11.63□□□□□ -0.55
LINC00544-202ENST00000481738 ANKRD13DQ6ZTN6 518 aa11.63□□□□□ -0.55
LINC00544-202ENST00000481738 NLRP10Q86W26 655 aa11.63□□□□□ -0.55
LINC00544-202ENST00000481738 TSPYL6Q8N831 410 aa11.63□□□□□ -0.55
LINC00544-202ENST00000481738 UTP14AQ9BVJ6 771 aaKnown RBP11.63□□□□□ -0.55
LINC00544-202ENST00000481738 IL16Q14005 1332 aa11.62□□□□□ -0.55
LINC00544-202ENST00000481738 FER1L6Q2WGJ9 1857 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms