RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.82□□□□□ -0.84
LRCH3-216ENST00000481048 FAM117AQ9C073 453 aa9.82□□□□□ -0.84
LRCH3-216ENST00000481048 KDM4CQ9H3R0 1056 aa9.82□□□□□ -0.84
LRCH3-216ENST00000481048 MSH6P52701 1360 aa9.82□□□□□ -0.84
LRCH3-216ENST00000481048 PIK3R4Q99570 1358 aa9.82□□□□□ -0.84
LRCH3-216ENST00000481048 ZC3H4Q9UPT8 1303 aaKnown RBP9.82□□□□□ -0.84
LRCH3-216ENST00000481048 AP1G2O75843 785 aa9.81□□□□□ -0.84
LRCH3-216ENST00000481048 PTK2Q05397 1052 aa9.81□□□□□ -0.84
LRCH3-216ENST00000481048 DHX9Q08211 1270 aaKnown RBP9.81□□□□□ -0.84
LRCH3-216ENST00000481048 PPP2R2DQ66LE6 453 aa9.81□□□□□ -0.84
LRCH3-216ENST00000481048 SLAIN2Q9P270 581 aa9.81□□□□□ -0.84
LRCH3-216ENST00000481048 ROBO1Q9Y6N7 1651 aa9.8□□□□□ -0.84
LRCH3-216ENST00000481048 NUP155O75694 1391 aa9.8□□□□□ -0.84
LRCH3-216ENST00000481048 INTS6LQ5JSJ4 861 aaKnown RBP9.8□□□□□ -0.84
LRCH3-216ENST00000481048 GPR161Q8N6U8 529 aaKnown RBP9.8□□□□□ -0.84
LRCH3-216ENST00000481048 DDRGK1Q96HY6 314 aa9.8□□□□□ -0.84
LRCH3-216ENST00000481048 AGBL1Q96MI9 1066 aa9.8□□□□□ -0.84
LRCH3-216ENST00000481048 OCSTAMPQ9BR26 566 aa9.8□□□□□ -0.84
LRCH3-216ENST00000481048 DIP2AQ14689 1571 aa9.8□□□□□ -0.84
LRCH3-216ENST00000481048 ADAM32Q8TC27 787 aa9.79□□□□□ -0.84
LRCH3-216ENST00000481048 RELBQ01201 579 aa9.78□□□□□ -0.84
LRCH3-216ENST00000481048 CCDC155Q8N6L0 562 aa9.78□□□□□ -0.84
LRCH3-216ENST00000481048 CNTNAP3BQ96NU0 1288 aa9.78□□□□□ -0.84
LRCH3-216ENST00000481048 CNTNAP3Q9BZ76 1288 aa9.78□□□□□ -0.84
LRCH3-216ENST00000481048 C19orf44Q9H6X5 657 aa9.78□□□□□ -0.84
LRCH3-216ENST00000481048 GPSM3Q9Y4H4 160 aa9.78□□□□□ -0.84
LRCH3-216ENST00000481048 ADAMTS13Q76LX8 1427 aa9.77□□□□□ -0.85
LRCH3-216ENST00000481048 KRT76Q01546 638 aa9.77□□□□□ -0.85
LRCH3-216ENST00000481048 EPS8L1Q8TE68 723 aa9.77□□□□□ -0.85
LRCH3-216ENST00000481048 PHLPP1O60346 1717 aa9.76□□□□□ -0.85
LRCH3-216ENST00000481048 SPHKAPQ2M3C7 1700 aa9.76□□□□□ -0.85
LRCH3-216ENST00000481048 CTSOP43234 321 aaPredicted RBP9.76□□□□□ -0.85
LRCH3-216ENST00000481048 INSM2Q96T92 566 aaPredicted RBP9.76□□□□□ -0.85
LRCH3-216ENST00000481048 RGS17Q9UGC6 210 aaPredicted RBP9.76□□□□□ -0.85
LRCH3-216ENST00000481048 ITGAEP38570 1179 aa9.75□□□□□ -0.85
LRCH3-216ENST00000481048 RAB15P59190 212 aa9.75□□□□□ -0.85
LRCH3-216ENST00000481048 NBPF20Q3BBV1 942 aa9.75□□□□□ -0.85
LRCH3-216ENST00000481048 PNMA1Q8ND90 353 aa9.75□□□□□ -0.85
LRCH3-216ENST00000481048 NANOS1Q8WY41 292 aaKnown RBP9.75□□□□□ -0.85
LRCH3-216ENST00000481048 COL25A1Q9BXS0 654 aaPredicted RBP9.75□□□□□ -0.85
LRCH3-216ENST00000481048 TMPRSS4Q9NRS4 437 aa9.75□□□□□ -0.85
LRCH3-216ENST00000481048 AMOTL2Q9Y2J4 779 aa9.75□□□□□ -0.85
LRCH3-216ENST00000481048 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.75□□□□□ -0.85
LRCH3-216ENST00000481048 TRPM2O94759 1503 aa9.75□□□□□ -0.85
LRCH3-216ENST00000481048 KIF1BO60333 1816 aa9.75□□□□□ -0.85
LRCH3-216ENST00000481048 JCADQ9P266 1359 aa9.75□□□□□ -0.85
LRCH3-216ENST00000481048 SLC35F4A4IF30 521 aa9.74□□□□□ -0.85
LRCH3-216ENST00000481048 ATF3P18847 181 aa9.74□□□□□ -0.85
LRCH3-216ENST00000481048 C14orf37Q86TY3 774 aa9.74□□□□□ -0.85
LRCH3-216ENST00000481048 ZNF395Q9H8N7 513 aaPredicted RBP9.74□□□□□ -0.85
LRCH3-216ENST00000481048 HMX1Q9NP08 348 aaPredicted RBP9.74□□□□□ -0.85
LRCH3-216ENST00000481048 POLMQ9NP87 494 aaPredicted RBP9.74□□□□□ -0.85
LRCH3-216ENST00000481048 USP17L8P0C7I0 530 aa9.73□□□□□ -0.85
LRCH3-216ENST00000481048 DZIP3Q86Y13 1208 aaKnown RBP9.73□□□□□ -0.85
LRCH3-216ENST00000481048 DCCP43146 1447 aa9.73□□□□□ -0.85
LRCH3-216ENST00000481048 RRBP1Q9P2E9 1410 aaKnown RBP9.73□□□□□ -0.85
LRCH3-216ENST00000481048 SETBP1Q9Y6X0 1596 aa9.72□□□□□ -0.85
LRCH3-216ENST00000481048 ZNF326Q5BKZ1 582 aaKnown RBP9.72□□□□□ -0.85
LRCH3-216ENST00000481048 VWA5B2Q8N398 1253 aa9.72□□□□□ -0.85
LRCH3-216ENST00000481048 ZNF784Q8NCA9 323 aaPredicted RBP9.72□□□□□ -0.85
LRCH3-216ENST00000481048 SPATA31A6Q5VVP1 1343 aa9.72□□□□□ -0.85
LRCH3-216ENST00000481048 ITGA6P23229 1130 aa9.71□□□□□ -0.86
LRCH3-216ENST00000481048 COL16A1Q07092 1604 aaPredicted RBP9.71□□□□□ -0.86
LRCH3-216ENST00000481048 AHDC1Q5TGY3 1603 aaPredicted RBP9.71□□□□□ -0.86
LRCH3-216ENST00000481048 CDC14CA4D256 554 aa9.7□□□□□ -0.86
LRCH3-216ENST00000481048 ERVH48-1M5A8F1 160 aa9.7□□□□□ -0.86
LRCH3-216ENST00000481048 KCNMA1Q12791 1236 aa9.7□□□□□ -0.86
LRCH3-216ENST00000481048 RNFT1Q5M7Z0 435 aa9.7□□□□□ -0.86
LRCH3-216ENST00000481048 POTEAQ6S8J7 498 aa9.7□□□□□ -0.86
LRCH3-216ENST00000481048 PPARGC1BQ86YN6 1023 aaKnown RBP9.7□□□□□ -0.86
LRCH3-216ENST00000481048 RNF217Q8TC41 542 aa9.7□□□□□ -0.86
LRCH3-216ENST00000481048 NAIPQ13075 1403 aa9.7□□□□□ -0.86
LRCH3-216ENST00000481048 PTPRUQ92729 1446 aa9.7□□□□□ -0.86
LRCH3-216ENST00000481048 NRXN3Q9Y4C0 1643 aa9.7□□□□□ -0.86
LRCH3-216ENST00000481048 ADH1AP07327 375 aa9.69□□□□□ -0.86
LRCH3-216ENST00000481048 ADD1P35611 737 aaKnown RBP9.69□□□□□ -0.86
LRCH3-216ENST00000481048 RFC5P40937 340 aa9.69□□□□□ -0.86
LRCH3-216ENST00000481048 SHPRHQ149N8 1683 aa9.69□□□□□ -0.86
LRCH3-216ENST00000481048 RPGRIP1LQ68CZ1 1315 aa9.69□□□□□ -0.86
LRCH3-216ENST00000481048 XRN1Q8IZH2 1706 aaKnown RBP9.69□□□□□ -0.86
LRCH3-216ENST00000481048 CLTCL1P53675 1640 aa9.68□□□□□ -0.86
LRCH3-216ENST00000481048 LILRA1O75019 489 aa9.68□□□□□ -0.86
LRCH3-216ENST00000481048 ZNF772Q68DY9 489 aaPredicted RBP9.68□□□□□ -0.86
LRCH3-216ENST00000481048 BRINP3Q76B58 766 aa9.68□□□□□ -0.86
LRCH3-216ENST00000481048 SV2AQ7L0J3 742 aa9.68□□□□□ -0.86
LRCH3-216ENST00000481048 ADAMTS8Q9UP79 889 aa9.68□□□□□ -0.86
LRCH3-216ENST00000481048 NEXMIFQ5QGS0 1516 aa9.67□□□□□ -0.86
LRCH3-216ENST00000481048 HFM1A2PYH4 1435 aa9.67□□□□□ -0.86
LRCH3-216ENST00000481048 METP08581 1390 aa9.67□□□□□ -0.86
LRCH3-216ENST00000481048 PTGIRP43119 386 aa9.67□□□□□ -0.86
LRCH3-216ENST00000481048 LRRC59Q96AG4 307 aaKnown RBP9.67□□□□□ -0.86
LRCH3-216ENST00000481048 ACIN1Q9UKV3 1341 aaKnown RBP9.66□□□□□ -0.86
LRCH3-216ENST00000481048 SENP3-EIF4A1A0A087X0R7 540 aa9.66□□□□□ -0.86
LRCH3-216ENST00000481048 ESPNB1AK53 854 aa9.66□□□□□ -0.86
LRCH3-216ENST00000481048 GSK3AP49840 483 aa9.66□□□□□ -0.86
LRCH3-216ENST00000481048 KDF1Q8NAX2 398 aaPredicted RBP9.66□□□□□ -0.86
LRCH3-216ENST00000481048 TRIM52Q96A61 297 aa9.66□□□□□ -0.86
LRCH3-216ENST00000481048 SETD5Q9C0A6 1442 aa9.65□□□□□ -0.86
LRCH3-216ENST00000481048 MEX3CQ5U5Q3 659 aaKnown RBP9.65□□□□□ -0.86
LRCH3-216ENST00000481048 FOXD4L5Q5VV16 416 aaPredicted RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 264.4 ms