RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 BAG3O95817 575 aa10.99□□□□□ -0.65
VEGFA-212ENST00000480614 KLHL10Q6JEL2 608 aa10.99□□□□□ -0.65
VEGFA-212ENST00000480614 ZNF444Q8N0Y2 327 aaPredicted RBP10.99□□□□□ -0.65
VEGFA-212ENST00000480614 DDX19AQ9NUU7 478 aaKnown RBP10.99□□□□□ -0.65
VEGFA-212ENST00000480614 ZNF644Q9H582 1327 aaPredicted RBP10.99□□□□□ -0.65
VEGFA-212ENST00000480614 CTR9Q6PD62 1173 aa10.99□□□□□ -0.65
VEGFA-212ENST00000480614 RPGRQ92834 1020 aaKnown RBP10.99□□□□□ -0.65
VEGFA-212ENST00000480614 UBA5Q9GZZ9 404 aa10.99□□□□□ -0.65
VEGFA-212ENST00000480614 PTPRCP08575 1304 aa10.99□□□□□ -0.65
VEGFA-212ENST00000480614 DNMBPQ6XZF7 1577 aa10.98□□□□□ -0.65
VEGFA-212ENST00000480614 TBC1D5Q92609 795 aa10.98□□□□□ -0.65
VEGFA-212ENST00000480614 RMND1Q9NWS8 449 aa10.98□□□□□ -0.65
VEGFA-212ENST00000480614 TMOD3Q9NYL9 352 aa10.98□□□□□ -0.65
VEGFA-212ENST00000480614 RASAL2Q9UJF2 1139 aa10.98□□□□□ -0.65
VEGFA-212ENST00000480614 NSD2O96028 1365 aa10.98□□□□□ -0.65
VEGFA-212ENST00000480614 MAP4K4O95819 1239 aaPredicted RBP10.98□□□□□ -0.65
VEGFA-212ENST00000480614 EIF2AK4Q9P2K8 1649 aaKnown RBP10.98□□□□□ -0.65
VEGFA-212ENST00000480614 TMPOP42166 694 aaKnown RBP10.98□□□□□ -0.65
VEGFA-212ENST00000480614 CC2D2AQ9P2K1 1620 aa10.98□□□□□ -0.65
VEGFA-212ENST00000480614 STMN4Q9H169 189 aaPredicted RBP10.98□□□□□ -0.65
VEGFA-212ENST00000480614 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.98□□□□□ -0.653e-6■■■■□ 21.5
VEGFA-212ENST00000480614 V9GYY5 206 aaPredicted RBP10.98□□□□□ -0.65
VEGFA-212ENST00000480614 MACROD2A1Z1Q3 448 aa10.98□□□□□ -0.65
VEGFA-212ENST00000480614 RBM10P98175 930 aaKnown RBP10.98□□□□□ -0.65
VEGFA-212ENST00000480614 DDX54Q8TDD1 881 aaKnown RBP10.98□□□□□ -0.65
VEGFA-212ENST00000480614 CDCA7LQ96GN5 454 aa10.98□□□□□ -0.65
VEGFA-212ENST00000480614 NSRP1Q9H0G5 558 aaKnown RBP10.98□□□□□ -0.65
VEGFA-212ENST00000480614 DUSP27Q5VZP5 1158 aa10.98□□□□□ -0.65
VEGFA-212ENST00000480614 CCDC61Q9Y6R9 512 aa10.98□□□□□ -0.65
VEGFA-212ENST00000480614 SYNJ1O43426 1573 aa10.98□□□□□ -0.65
VEGFA-212ENST00000480614 ABCF2Q9UG63 623 aa10.97□□□□□ -0.65
VEGFA-212ENST00000480614 ERICH4A6NGS2 130 aa10.97□□□□□ -0.65
VEGFA-212ENST00000480614 TUBB4BP68371 445 aa10.97□□□□□ -0.65
VEGFA-212ENST00000480614 TAF7Q15545 349 aaPredicted RBP10.97□□□□□ -0.65
VEGFA-212ENST00000480614 AQRO60306 1485 aaKnown RBP eCLIP10.97□□□□□ -0.652e-11■■■■■ 27.4
VEGFA-212ENST00000480614 PDE4BQ07343 736 aa10.97□□□□□ -0.65
VEGFA-212ENST00000480614 DYNC1I1O14576 645 aa10.97□□□□□ -0.65
VEGFA-212ENST00000480614 CNNM3Q8NE01 707 aa10.97□□□□□ -0.65
VEGFA-212ENST00000480614 PPP1R14CQ8TAE6 165 aa10.97□□□□□ -0.65
VEGFA-212ENST00000480614 CCDC40Q4G0X9 1142 aa10.96□□□□□ -0.65
VEGFA-212ENST00000480614 B4DLN1 442 aa10.96□□□□□ -0.65
VEGFA-212ENST00000480614 MRPL12P52815 198 aaKnown RBP10.96□□□□□ -0.65
VEGFA-212ENST00000480614 UBE4AQ14139 1066 aa10.96□□□□□ -0.65
VEGFA-212ENST00000480614 CLIP2Q9UDT6 1046 aa10.96□□□□□ -0.65
VEGFA-212ENST00000480614 TTC21BQ7Z4L5 1316 aa10.96□□□□□ -0.65
VEGFA-212ENST00000480614 TBCAO75347 108 aaKnown RBP10.96□□□□□ -0.65
VEGFA-212ENST00000480614 CCDC155Q8N6L0 562 aa10.96□□□□□ -0.66
VEGFA-212ENST00000480614 MYO9BQ13459 2157 aa10.96□□□□□ -0.66
VEGFA-212ENST00000480614 HLTFQ14527 1009 aaKnown RBP eCLIP10.96□□□□□ -0.664e-40■■□□□ 11.4
VEGFA-212ENST00000480614 SPECC1Q5M775 1068 aa10.96□□□□□ -0.66
VEGFA-212ENST00000480614 SLC12A5Q9H2X9 1139 aa10.96□□□□□ -0.66
VEGFA-212ENST00000480614 SPDYE4A6NLX3 237 aa10.96□□□□□ -0.66
VEGFA-212ENST00000480614 LDHCP07864 332 aa10.96□□□□□ -0.66
VEGFA-212ENST00000480614 PPM1FP49593 454 aaPredicted RBP10.96□□□□□ -0.66
VEGFA-212ENST00000480614 MINDY4BA8MYZ0 360 aa10.96□□□□□ -0.66
VEGFA-212ENST00000480614 TEX13AQ9BXU3 409 aaPredicted RBP10.96□□□□□ -0.66
VEGFA-212ENST00000480614 FMNL3Q8IVF7 1028 aa10.96□□□□□ -0.66
VEGFA-212ENST00000480614 CDC5LQ99459 802 aaKnown RBP10.96□□□□□ -0.66
VEGFA-212ENST00000480614 RANBP6O60518 1105 aaKnown RBP10.95□□□□□ -0.66
VEGFA-212ENST00000480614 HLA-DOAP06340 250 aa10.95□□□□□ -0.66
VEGFA-212ENST00000480614 ANKS4BQ8N8V4 417 aa10.95□□□□□ -0.66
VEGFA-212ENST00000480614 CTAGE1Q96RT6 745 aa10.95□□□□□ -0.66
VEGFA-212ENST00000480614 FSIP1Q8NA03 581 aa10.95□□□□□ -0.66
VEGFA-212ENST00000480614 NCAPD3P42695 1498 aa10.95□□□□□ -0.66
VEGFA-212ENST00000480614 SYCP3Q8IZU3 236 aa10.95□□□□□ -0.66
VEGFA-212ENST00000480614 TUBB4AP04350 444 aa10.95□□□□□ -0.66
VEGFA-212ENST00000480614 GSTO1P78417 241 aa10.95□□□□□ -0.66
VEGFA-212ENST00000480614 RNF187Q5TA31 235 aaPredicted RBP10.95□□□□□ -0.66
VEGFA-212ENST00000480614 CCDC174Q6PII3 467 aa10.95□□□□□ -0.66
VEGFA-212ENST00000480614 SMARCC1Q92922 1105 aaPredicted RBP10.95□□□□□ -0.66
VEGFA-212ENST00000480614 PAXBP1Q9Y5B6 917 aa10.95□□□□□ -0.66
VEGFA-212ENST00000480614 PRPF40BQ6NWY9 871 aaKnown RBP10.95□□□□□ -0.66
VEGFA-212ENST00000480614 EVI5LQ96CN4 794 aa10.95□□□□□ -0.66
VEGFA-212ENST00000480614 SYNCQ9H7C4 482 aa10.95□□□□□ -0.66
VEGFA-212ENST00000480614 ZNF213O14771 459 aa10.95□□□□□ -0.66
VEGFA-212ENST00000480614 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.94□□□□□ -0.666e-8■□□□□ 11.3
VEGFA-212ENST00000480614 CCDC171Q6TFL3 1326 aa10.94□□□□□ -0.66
VEGFA-212ENST00000480614 DDX23Q9BUQ8 820 aaKnown RBP10.94□□□□□ -0.66
VEGFA-212ENST00000480614 SELENOOQ9BVL4 669 aa10.94□□□□□ -0.66
VEGFA-212ENST00000480614 NLRP5P59047 1200 aa10.94□□□□□ -0.66
VEGFA-212ENST00000480614 UTP14AQ9BVJ6 771 aaKnown RBP10.94□□□□□ -0.66
VEGFA-212ENST00000480614 TTC14Q96N46 770 aa10.94□□□□□ -0.66
VEGFA-212ENST00000480614 CCDC77Q9BR77 488 aa10.94□□□□□ -0.66
VEGFA-212ENST00000480614 UBA7P41226 1012 aa10.94□□□□□ -0.66
VEGFA-212ENST00000480614 CAMK4Q16566 473 aa10.94□□□□□ -0.66
VEGFA-212ENST00000480614 SPINK5Q9NQ38 1064 aaPredicted RBP10.94□□□□□ -0.66
VEGFA-212ENST00000480614 IFIT3O14879 490 aaKnown RBP10.94□□□□□ -0.66
VEGFA-212ENST00000480614 TMEM57Q8N5G2 664 aa10.94□□□□□ -0.66
VEGFA-212ENST00000480614 BCCIPQ9P287 314 aaKnown RBP eCLIP10.94□□□□□ -0.66
VEGFA-212ENST00000480614 UVSSAQ2YD98 709 aa10.94□□□□□ -0.66
VEGFA-212ENST00000480614 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.93□□□□□ -0.668e-8■□□□□ 9.1
VEGFA-212ENST00000480614 SPAG1Q07617 926 aa10.93□□□□□ -0.66
VEGFA-212ENST00000480614 URI1O94763 535 aaPredicted RBP10.93□□□□□ -0.66
VEGFA-212ENST00000480614 ZGPATQ8N5A5 531 aaKnown RBP10.93□□□□□ -0.66
VEGFA-212ENST00000480614 CTTNBP2Q8WZ74 1663 aa10.93□□□□□ -0.66
VEGFA-212ENST00000480614 TDRD12Q587J7 1177 aaKnown RBP10.93□□□□□ -0.66
VEGFA-212ENST00000480614 NOP2P46087 812 aaKnown RBP10.93□□□□□ -0.66
VEGFA-212ENST00000480614 TTLL12Q14166 644 aaPredicted RBP10.93□□□□□ -0.66
VEGFA-212ENST00000480614 GOLGA8AA7E2F4 631 aa10.93□□□□□ -0.66
VEGFA-212ENST00000480614 EXOC1Q9NV70 894 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms