RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 TEAD4Q15561 434 aa11.06□□□□□ -0.64
GAPVD1-217ENST00000479511 C11orf91Q3C1V1 193 aa11.06□□□□□ -0.64
GAPVD1-217ENST00000479511 CNKSR1Q969H4 720 aa11.06□□□□□ -0.64
GAPVD1-217ENST00000479511 CHMP3Q9Y3E7 222 aa11.06□□□□□ -0.64
GAPVD1-217ENST00000479511 SIAH2O43255 324 aa11.05□□□□□ -0.64
GAPVD1-217ENST00000479511 TRIM52Q96A61 297 aa11.05□□□□□ -0.64
GAPVD1-217ENST00000479511 IFT43Q96FT9 208 aa11.05□□□□□ -0.64
GAPVD1-217ENST00000479511 AK5Q9Y6K8 562 aa11.05□□□□□ -0.64
GAPVD1-217ENST00000479511 ADH1CP00326 375 aa11.04□□□□□ -0.64
GAPVD1-217ENST00000479511 NOS2P35228 1153 aa11.04□□□□□ -0.64
GAPVD1-217ENST00000479511 USP5P45974 858 aa11.04□□□□□ -0.64
GAPVD1-217ENST00000479511 RTN1Q16799 776 aa11.04□□□□□ -0.64
GAPVD1-217ENST00000479511 MPNDQ8N594 471 aa11.04□□□□□ -0.64
GAPVD1-217ENST00000479511 ANKLE1Q8NAG6 615 aa11.04□□□□□ -0.64
GAPVD1-217ENST00000479511 KDF1Q8NAX2 398 aaPredicted RBP11.04□□□□□ -0.64
GAPVD1-217ENST00000479511 ESYT1Q9BSJ8 1104 aa11.04□□□□□ -0.64
GAPVD1-217ENST00000479511 PARP3Q9Y6F1 533 aa11.04□□□□□ -0.64
GAPVD1-217ENST00000479511 EIF1AYO14602 144 aaKnown RBP11.03□□□□□ -0.64
GAPVD1-217ENST00000479511 ATP2B1P20020 1258 aa11.03□□□□□ -0.64
GAPVD1-217ENST00000479511 FHDC1Q9C0D6 1143 aaPredicted RBP11.03□□□□□ -0.64
GAPVD1-217ENST00000479511 GGNBP2Q9H3C7 697 aa11.03□□□□□ -0.64
GAPVD1-217ENST00000479511 NLRP2Q9NX02 1062 aa11.03□□□□□ -0.64
GAPVD1-217ENST00000479511 ZNF232Q9UNY5 417 aa11.03□□□□□ -0.64
GAPVD1-217ENST00000479511 A6NHS1 94 aa11.02□□□□□ -0.65
GAPVD1-217ENST00000479511 PPM1GO15355 546 aaPredicted RBP11.02□□□□□ -0.65
GAPVD1-217ENST00000479511 GTF2F1P35269 517 aaKnown RBP eCLIP11.02□□□□□ -0.65
GAPVD1-217ENST00000479511 RACK1P63244 317 aaKnown RBP11.02□□□□□ -0.65
GAPVD1-217ENST00000479511 ZNF394Q53GI3 561 aa11.02□□□□□ -0.65
GAPVD1-217ENST00000479511 GPR152Q8TDT2 470 aa11.02□□□□□ -0.65
GAPVD1-217ENST00000479511 FBF1Q8TES7 1133 aa11.02□□□□□ -0.65
GAPVD1-217ENST00000479511 L3MBTL2Q969R5 705 aa11.02□□□□□ -0.65
GAPVD1-217ENST00000479511 CRELD1Q96HD1 420 aa11.02□□□□□ -0.65
GAPVD1-217ENST00000479511 GMLQ99445 158 aa11.02□□□□□ -0.65
GAPVD1-217ENST00000479511 DDX41Q9UJV9 622 aaKnown RBP11.02□□□□□ -0.65
GAPVD1-217ENST00000479511 PCDHGB7Q9Y5F8 929 aa11.02□□□□□ -0.65
GAPVD1-217ENST00000479511 OPLAHO14841 1288 aa11.01□□□□□ -0.65
GAPVD1-217ENST00000479511 RPIAP49247 311 aa11.01□□□□□ -0.65
GAPVD1-217ENST00000479511 PHACTR1Q9C0D0 580 aa11.01□□□□□ -0.65
GAPVD1-217ENST00000479511 CUEDC1Q9NWM3 386 aaPredicted RBP11.01□□□□□ -0.65
GAPVD1-217ENST00000479511 CABP1Q9NZU7 370 aa11.01□□□□□ -0.65
GAPVD1-217ENST00000479511 DNAJA1P31689 397 aaKnown RBP11□□□□□ -0.65
GAPVD1-217ENST00000479511 NR5A1Q13285 461 aa11□□□□□ -0.65
GAPVD1-217ENST00000479511 TREML1Q86YW5 311 aa11□□□□□ -0.65
GAPVD1-217ENST00000479511 NBPF15Q8N660 670 aa11□□□□□ -0.65
GAPVD1-217ENST00000479511 NUDT16Q96DE0 195 aaKnown RBP11□□□□□ -0.65
GAPVD1-217ENST00000479511 CENPCQ03188 943 aa10.99□□□□□ -0.65
GAPVD1-217ENST00000479511 PGPEP1Q9NXJ5 209 aa10.99□□□□□ -0.65
GAPVD1-217ENST00000479511 ADH1AP07327 375 aa10.98□□□□□ -0.65
GAPVD1-217ENST00000479511 CLN3Q13286 438 aa10.98□□□□□ -0.65
GAPVD1-217ENST00000479511 BCS1LQ9Y276 419 aa10.98□□□□□ -0.65
GAPVD1-217ENST00000479511 GNL2Q13823 731 aaKnown RBP10.97□□□□□ -0.65
GAPVD1-217ENST00000479511 CCDC144BQ3MJ40 725 aa10.97□□□□□ -0.65
GAPVD1-217ENST00000479511 C8orf34Q49A92 452 aa10.97□□□□□ -0.65
GAPVD1-217ENST00000479511 NOP9Q86U38 636 aaKnown RBP10.97□□□□□ -0.65
GAPVD1-217ENST00000479511 FRMD6Q96NE9 622 aa10.97□□□□□ -0.65
GAPVD1-217ENST00000479511 SRA1Q9HD15 236 aaKnown RBP10.97□□□□□ -0.65
GAPVD1-217ENST00000479511 INPP5FQ9Y2H2 1132 aa10.97□□□□□ -0.65
GAPVD1-217ENST00000479511 EIF4BP23588 611 aaKnown RBP10.96□□□□□ -0.65
GAPVD1-217ENST00000479511 PTPN12Q05209 780 aaKnown RBP10.96□□□□□ -0.65
GAPVD1-217ENST00000479511 CBLBQ13191 982 aa10.96□□□□□ -0.65
GAPVD1-217ENST00000479511 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.96□□□□□ -0.65
GAPVD1-217ENST00000479511 PI16Q6UXB8 463 aa10.96□□□□□ -0.65
GAPVD1-217ENST00000479511 ZNF654Q8IZM8 581 aa10.96□□□□□ -0.65
GAPVD1-217ENST00000479511 ARMC5Q96C12 935 aa10.96□□□□□ -0.65
GAPVD1-217ENST00000479511 DNAJC25Q9H1X3 360 aa10.96□□□□□ -0.65
GAPVD1-217ENST00000479511 CD2BP2O95400 341 aaKnown RBP10.95□□□□□ -0.66
GAPVD1-217ENST00000479511 PCSK2P16519 638 aa10.95□□□□□ -0.66
GAPVD1-217ENST00000479511 ARID5AQ03989 594 aa10.95□□□□□ -0.66
GAPVD1-217ENST00000479511 USPL1Q5W0Q7 1092 aa10.95□□□□□ -0.66
GAPVD1-217ENST00000479511 ZNF662Q6ZS27 426 aa10.95□□□□□ -0.66
GAPVD1-217ENST00000479511 USP48Q86UV5 1035 aa10.95□□□□□ -0.66
GAPVD1-217ENST00000479511 PPARGC1BQ86YN6 1023 aaKnown RBP10.95□□□□□ -0.66
GAPVD1-217ENST00000479511 OSBPL7Q9BZF2 842 aa10.95□□□□□ -0.66
GAPVD1-217ENST00000479511 SPG7Q9UQ90 795 aa10.95□□□□□ -0.66
GAPVD1-217ENST00000479511 TXLNAP40222 546 aa10.94□□□□□ -0.66
GAPVD1-217ENST00000479511 RBL2Q08999 1139 aa10.94□□□□□ -0.66
GAPVD1-217ENST00000479511 PMFBP1Q8TBY8 1022 aa10.94□□□□□ -0.66
GAPVD1-217ENST00000479511 PIF1Q9H611 641 aa10.94□□□□□ -0.66
GAPVD1-217ENST00000479511 ANKRD62A6NC57 917 aa10.93□□□□□ -0.66
GAPVD1-217ENST00000479511 CPNE3O75131 537 aaKnown RBP10.93□□□□□ -0.66
GAPVD1-217ENST00000479511 IRS1P35568 1242 aa10.93□□□□□ -0.66
GAPVD1-217ENST00000479511 KCNC4Q03721 635 aa10.93□□□□□ -0.66
GAPVD1-217ENST00000479511 PPP1R18Q6NYC8 613 aa10.93□□□□□ -0.66
GAPVD1-217ENST00000479511 LIAT1Q6ZQX7 453 aa10.93□□□□□ -0.66
GAPVD1-217ENST00000479511 EMID1Q96A84 441 aaPredicted RBP10.93□□□□□ -0.66
GAPVD1-217ENST00000479511 KLRG1Q96E93 195 aa10.93□□□□□ -0.66
GAPVD1-217ENST00000479511 MEN1O00255 615 aa10.92□□□□□ -0.66
GAPVD1-217ENST00000479511 PTGIRP43119 386 aa10.92□□□□□ -0.66
GAPVD1-217ENST00000479511 C1orf53Q5VUE5 145 aa10.92□□□□□ -0.66
GAPVD1-217ENST00000479511 EPS8L3Q8TE67 593 aaKnown RBP10.92□□□□□ -0.66
GAPVD1-217ENST00000479511 MRGPRX2Q96LB1 330 aa10.92□□□□□ -0.66
GAPVD1-217ENST00000479511 AGBL1Q96MI9 1066 aa10.92□□□□□ -0.66
GAPVD1-217ENST00000479511 C12orf49Q9H741 205 aa10.92□□□□□ -0.66
GAPVD1-217ENST00000479511 FOXD3Q9UJU5 478 aaPredicted RBP10.92□□□□□ -0.66
GAPVD1-217ENST00000479511 MICAL2O94851 1124 aa10.91□□□□□ -0.66
GAPVD1-217ENST00000479511 NEFLP07196 543 aa10.91□□□□□ -0.66
GAPVD1-217ENST00000479511 GGCXP38435 758 aa10.91□□□□□ -0.66
GAPVD1-217ENST00000479511 MEI1Q5TIA1 1274 aa10.91□□□□□ -0.66
GAPVD1-217ENST00000479511 C7orf43Q8WVR3 580 aa10.91□□□□□ -0.66
GAPVD1-217ENST00000479511 HIRIP3Q9BW71 556 aaPredicted RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms