RNA–Protein interactions for RNA: ENST00000479402.1

ACTR3B-204, Transcript of ARP3 actin related protein 3 homolog B, humanhuman

TSL 2

Gene ACTR3B, Length 5,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR3B-204ENST00000479402 CBX1P83916 185 aa14.16□□□□□ -0.14
ACTR3B-204ENST00000479402 DBF4Q9UBU7 674 aaPredicted RBP14.16□□□□□ -0.14
ACTR3B-204ENST00000479402 MATR3P43243 847 aaKnown RBP eCLIP14.16□□□□□ -0.14
ACTR3B-204ENST00000479402 RBM5P52756 815 aaKnown RBP eCLIP14.16□□□□□ -0.14
ACTR3B-204ENST00000479402 SLF2Q8IX21 1173 aa14.16□□□□□ -0.14
ACTR3B-204ENST00000479402 ARHGEF11O15085 1522 aa14.15□□□□□ -0.14
ACTR3B-204ENST00000479402 USP5P45974 858 aa14.15□□□□□ -0.14
ACTR3B-204ENST00000479402 CCDC178Q5BJE1 867 aa14.15□□□□□ -0.14
ACTR3B-204ENST00000479402 TMOD2Q9NZR1 351 aa14.15□□□□□ -0.14
ACTR3B-204ENST00000479402 PRDM11Q9NQV5 511 aa14.15□□□□□ -0.14
ACTR3B-204ENST00000479402 GOLIM4O00461 696 aa14.15□□□□□ -0.14
ACTR3B-204ENST00000479402 NEBLO76041 1014 aa14.15□□□□□ -0.14
ACTR3B-204ENST00000479402 TMC6Q7Z403 805 aa14.15□□□□□ -0.14
ACTR3B-204ENST00000479402 ANAPC15P60006 121 aa14.15□□□□□ -0.14
ACTR3B-204ENST00000479402 CATIPQ7Z7H3 387 aa14.15□□□□□ -0.14
ACTR3B-204ENST00000479402 IFIT5Q13325 482 aaKnown RBP14.14□□□□□ -0.15
ACTR3B-204ENST00000479402 PPP4R3AQ6IN85 833 aa14.14□□□□□ -0.15
ACTR3B-204ENST00000479402 ZSCAN23Q3MJ62 389 aa14.14□□□□□ -0.15
ACTR3B-204ENST00000479402 CEP135Q66GS9 1140 aa14.14□□□□□ -0.15
ACTR3B-204ENST00000479402 DDX12PQ92771 950 aa14.14□□□□□ -0.15
ACTR3B-204ENST00000479402 SMARCC1Q92922 1105 aaPredicted RBP14.14□□□□□ -0.15
ACTR3B-204ENST00000479402 CCDC194A0A1B0GVG4 234 aa14.14□□□□□ -0.15
ACTR3B-204ENST00000479402 RMND1Q9NWS8 449 aa14.14□□□□□ -0.15
ACTR3B-204ENST00000479402 BMP15O95972 392 aa14.14□□□□□ -0.15
ACTR3B-204ENST00000479402 POLR3DP05423 398 aaPredicted RBP14.14□□□□□ -0.15
ACTR3B-204ENST00000479402 NUCB1Q02818 461 aa14.14□□□□□ -0.15
ACTR3B-204ENST00000479402 CKAP4Q07065 602 aaKnown RBP14.14□□□□□ -0.15
ACTR3B-204ENST00000479402 IFI16Q16666 785 aaKnown RBP14.14□□□□□ -0.15
ACTR3B-204ENST00000479402 KLHL10Q6JEL2 608 aa14.14□□□□□ -0.15
ACTR3B-204ENST00000479402 MKNK2Q9HBH9 465 aa14.14□□□□□ -0.15
ACTR3B-204ENST00000479402 PEG3Q9GZU2 1588 aa14.14□□□□□ -0.15
ACTR3B-204ENST00000479402 SSR1P43307 286 aaKnown RBP14.13□□□□□ -0.15
ACTR3B-204ENST00000479402 ZSCAN29Q8IWY8 852 aaPredicted RBP14.13□□□□□ -0.15
ACTR3B-204ENST00000479402 CUL5Q93034 780 aa14.13□□□□□ -0.15
ACTR3B-204ENST00000479402 STAMBPO95630 424 aa14.13□□□□□ -0.15
ACTR3B-204ENST00000479402 SNX21Q969T3 373 aa14.13□□□□□ -0.15
ACTR3B-204ENST00000479402 CALML4Q96GE6 196 aa14.13□□□□□ -0.15
ACTR3B-204ENST00000479402 CTAGE1Q96RT6 745 aa14.13□□□□□ -0.15
ACTR3B-204ENST00000479402 KIF5BP33176 963 aa14.13□□□□□ -0.15
ACTR3B-204ENST00000479402 C16orf45Q96MC5 204 aaPredicted RBP14.13□□□□□ -0.15
ACTR3B-204ENST00000479402 ANKRD18BA2A2Z9 1011 aa14.13□□□□□ -0.15
ACTR3B-204ENST00000479402 FLIIQ13045 1269 aa14.13□□□□□ -0.15
ACTR3B-204ENST00000479402 STXBP4Q6ZWJ1 553 aa14.13□□□□□ -0.15
ACTR3B-204ENST00000479402 CKAP2LQ8IYA6 745 aa14.13□□□□□ -0.15
ACTR3B-204ENST00000479402 TMOD3Q9NYL9 352 aa14.13□□□□□ -0.15
ACTR3B-204ENST00000479402 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.13□□□□□ -0.15
ACTR3B-204ENST00000479402 ZSCAN22P10073 491 aaPredicted RBP14.12□□□□□ -0.15
ACTR3B-204ENST00000479402 CETN1Q12798 172 aa14.12□□□□□ -0.15
ACTR3B-204ENST00000479402 POLR3GO15318 223 aaPredicted RBP14.12□□□□□ -0.15
ACTR3B-204ENST00000479402 NLRP5P59047 1200 aa14.12□□□□□ -0.15
ACTR3B-204ENST00000479402 CTR9Q6PD62 1173 aa14.12□□□□□ -0.15
ACTR3B-204ENST00000479402 KLHL34Q8N239 644 aa14.12□□□□□ -0.15
ACTR3B-204ENST00000479402 IFIT3O14879 490 aaKnown RBP14.12□□□□□ -0.15
ACTR3B-204ENST00000479402 TUBB4BP68371 445 aa14.12□□□□□ -0.15
ACTR3B-204ENST00000479402 ZNF165P49910 485 aa14.12□□□□□ -0.15
ACTR3B-204ENST00000479402 NEK1Q96PY6 1258 aa14.12□□□□□ -0.15
ACTR3B-204ENST00000479402 NUP160Q12769 1436 aa14.11□□□□□ -0.15
ACTR3B-204ENST00000479402 CCDC102BQ68D86 513 aa14.11□□□□□ -0.15
ACTR3B-204ENST00000479402 ABCF2Q9UG63 623 aa14.11□□□□□ -0.15
ACTR3B-204ENST00000479402 THOC2Q8NI27 1593 aaKnown RBP14.11□□□□□ -0.15
ACTR3B-204ENST00000479402 MTIF2P46199 727 aaKnown RBP14.11□□□□□ -0.15
ACTR3B-204ENST00000479402 PPP4R3BQ5MIZ7 849 aa14.11□□□□□ -0.15
ACTR3B-204ENST00000479402 ASXL1Q8IXJ9 1541 aa14.11□□□□□ -0.15
ACTR3B-204ENST00000479402 IARSP41252 1262 aaKnown RBP14.11□□□□□ -0.15
ACTR3B-204ENST00000479402 SPECC1LQ69YQ0 1117 aa14.11□□□□□ -0.15
ACTR3B-204ENST00000479402 ZNF444Q8N0Y2 327 aaPredicted RBP14.11□□□□□ -0.15
ACTR3B-204ENST00000479402 THUMPD2Q9BTF0 503 aaKnown RBP14.11□□□□□ -0.15
ACTR3B-204ENST00000479402 MINDY4BA8MYZ0 360 aa14.11□□□□□ -0.15
ACTR3B-204ENST00000479402 CCDC175P0C221 793 aa14.11□□□□□ -0.15
ACTR3B-204ENST00000479402 NCOA7Q8NI08 942 aa14.11□□□□□ -0.15
ACTR3B-204ENST00000479402 SRRTQ9BXP5 876 aaKnown RBP14.11□□□□□ -0.15
ACTR3B-204ENST00000479402 TCP11L1Q9NUJ3 509 aa14.11□□□□□ -0.15
ACTR3B-204ENST00000479402 CLCN1P35523 988 aa14.1□□□□□ -0.15
ACTR3B-204ENST00000479402 TDRD12Q587J7 1177 aaKnown RBP14.1□□□□□ -0.15
ACTR3B-204ENST00000479402 HS1BP3Q53T59 392 aa14.1□□□□□ -0.15
ACTR3B-204ENST00000479402 DZIP1Q86YF9 867 aaKnown RBP14.1□□□□□ -0.15
ACTR3B-204ENST00000479402 TEX13AQ9BXU3 409 aaPredicted RBP14.1□□□□□ -0.15
ACTR3B-204ENST00000479402 MIS18AQ9NYP9 233 aa14.1□□□□□ -0.15
ACTR3B-204ENST00000479402 CCDC113Q9H0I3 377 aa14.1□□□□□ -0.15
ACTR3B-204ENST00000479402 CCDC8Q9H0W5 538 aaPredicted RBP14.1□□□□□ -0.15
ACTR3B-204ENST00000479402 CCDC172P0C7W6 258 aa14.09□□□□□ -0.15
ACTR3B-204ENST00000479402 GOPCQ9HD26 462 aa14.09□□□□□ -0.15
ACTR3B-204ENST00000479402 TTC21AQ8NDW8 1320 aa14.09□□□□□ -0.15
ACTR3B-204ENST00000479402 GSTTP1A0A1W2PQM5 241 aa14.09□□□□□ -0.15
ACTR3B-204ENST00000479402 WASLO00401 505 aaPredicted RBP14.09□□□□□ -0.15
ACTR3B-204ENST00000479402 HOOK3Q86VS8 718 aa14.09□□□□□ -0.15
ACTR3B-204ENST00000479402 KCNG4Q8TDN1 519 aa14.09□□□□□ -0.15
ACTR3B-204ENST00000479402 PIBF1Q8WXW3 757 aa14.09□□□□□ -0.15
ACTR3B-204ENST00000479402 SPINK5Q9NQ38 1064 aaPredicted RBP14.09□□□□□ -0.15
ACTR3B-204ENST00000479402 TRMT1Q9NXH9 659 aaKnown RBP14.09□□□□□ -0.15
ACTR3B-204ENST00000479402 USP16Q9Y5T5 823 aa14.09□□□□□ -0.15
ACTR3B-204ENST00000479402 EIF2AK4Q9P2K8 1649 aaKnown RBP14.09□□□□□ -0.15
ACTR3B-204ENST00000479402 PRKCSHP14314 528 aaPredicted RBP14.09□□□□□ -0.15
ACTR3B-204ENST00000479402 SPAG1Q07617 926 aa14.09□□□□□ -0.15
ACTR3B-204ENST00000479402 KRT222Q8N1A0 295 aa14.09□□□□□ -0.15
ACTR3B-204ENST00000479402 BBXQ8WY36 941 aaPredicted RBP14.09□□□□□ -0.15
ACTR3B-204ENST00000479402 ADGRL1O94910 1474 aa14.09□□□□□ -0.15
ACTR3B-204ENST00000479402 C11orf95C9JLR9 678 aaPredicted RBP14.09□□□□□ -0.15
ACTR3B-204ENST00000479402 IVLP07476 585 aa14.08□□□□□ -0.15
ACTR3B-204ENST00000479402 METAP2P50579 478 aaKnown RBP eCLIP14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms