RNA–Protein interactions for RNA: ENST00000477702.1

LINC00173-202, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-202ENST00000477702 SKIV2LQ15477 1246 aaKnown RBP9.09□□□□□ -0.95
LINC00173-202ENST00000477702 PUS10Q3MIT2 529 aaKnown RBP9.09□□□□□ -0.95
LINC00173-202ENST00000477702 NUDT16Q96DE0 195 aaKnown RBP9.09□□□□□ -0.95
LINC00173-202ENST00000477702 HOXA2O43364 376 aa9.08□□□□□ -0.96
LINC00173-202ENST00000477702 GCP02774 474 aa9.08□□□□□ -0.96
LINC00173-202ENST00000477702 CSPP1Q1MSJ5 1256 aa9.08□□□□□ -0.96
LINC00173-202ENST00000477702 RIC3Q7Z5B4 369 aa9.08□□□□□ -0.96
LINC00173-202ENST00000477702 TNS4Q8IZW8 715 aa9.08□□□□□ -0.96
LINC00173-202ENST00000477702 DNAJC5GQ8N7S2 189 aa9.08□□□□□ -0.96
LINC00173-202ENST00000477702 ACSBG1Q96GR2 724 aa9.08□□□□□ -0.96
LINC00173-202ENST00000477702 RSPH6AQ9H0K4 717 aa9.08□□□□□ -0.96
LINC00173-202ENST00000477702 PCDHB15Q9Y5E8 787 aa9.08□□□□□ -0.96
LINC00173-202ENST00000477702 USP19O94966 1318 aa9.07□□□□□ -0.96
LINC00173-202ENST00000477702 ACEP12821 1306 aa9.07□□□□□ -0.96
LINC00173-202ENST00000477702 CLK2P49760 499 aaKnown RBP9.07□□□□□ -0.96
LINC00173-202ENST00000477702 RSBN1LQ6PCB5 846 aaPredicted RBP9.07□□□□□ -0.96
LINC00173-202ENST00000477702 GOPCQ9HD26 462 aa9.07□□□□□ -0.96
LINC00173-202ENST00000477702 AATKQ6ZMQ8 1374 aa9.07□□□□□ -0.96
LINC00173-202ENST00000477702 BCL9O00512 1426 aa9.06□□□□□ -0.96
LINC00173-202ENST00000477702 SPTLC1O15269 473 aa9.06□□□□□ -0.96
LINC00173-202ENST00000477702 PRELPP51888 382 aa9.06□□□□□ -0.96
LINC00173-202ENST00000477702 PCMTD1Q96MG8 357 aaPredicted RBP9.06□□□□□ -0.96
LINC00173-202ENST00000477702 LRRC4BQ9NT99 713 aa9.06□□□□□ -0.96
LINC00173-202ENST00000477702 PCDH10Q9P2E7 1040 aa9.06□□□□□ -0.96
LINC00173-202ENST00000477702 PCDHGC3Q9UN70 934 aa9.06□□□□□ -0.96
LINC00173-202ENST00000477702 GTF3C3Q9Y5Q9 886 aa9.06□□□□□ -0.96
LINC00173-202ENST00000477702 TOPAZ1Q8N9V7 1692 aa9.05□□□□□ -0.96
LINC00173-202ENST00000477702 ADCY9O60503 1353 aa9.05□□□□□ -0.96
LINC00173-202ENST00000477702 EXOC5O00471 708 aa9.05□□□□□ -0.96
LINC00173-202ENST00000477702 ACTN4O43707 911 aaKnown RBP9.05□□□□□ -0.96
LINC00173-202ENST00000477702 KMT5BQ4FZB7 885 aa9.05□□□□□ -0.96
LINC00173-202ENST00000477702 NLRP13Q86W25 1043 aa9.05□□□□□ -0.96
LINC00173-202ENST00000477702 SLC16A10Q8TF71 515 aa9.05□□□□□ -0.96
LINC00173-202ENST00000477702 PAPPAQ13219 1627 aa9.05□□□□□ -0.96
LINC00173-202ENST00000477702 PNPLA7Q6ZV29 1317 aa9.05□□□□□ -0.96
LINC00173-202ENST00000477702 AKAP12Q02952 1782 aa9.04□□□□□ -0.96
LINC00173-202ENST00000477702 KCNQ4P56696 695 aa9.04□□□□□ -0.96
LINC00173-202ENST00000477702 USP46P62068 366 aa9.04□□□□□ -0.96
LINC00173-202ENST00000477702 HTRA3P83110 453 aa9.04□□□□□ -0.96
LINC00173-202ENST00000477702 DIXDC1Q155Q3 683 aa9.04□□□□□ -0.96
LINC00173-202ENST00000477702 QPCTQ16769 361 aa9.04□□□□□ -0.96
LINC00173-202ENST00000477702 CDCA7Q9BWT1 371 aaPredicted RBP9.04□□□□□ -0.96
LINC00173-202ENST00000477702 WWC3Q9ULE0 1092 aa9.04□□□□□ -0.96
LINC00173-202ENST00000477702 WDR17Q8IZU2 1322 aa9.04□□□□□ -0.96
LINC00173-202ENST00000477702 POLR3AO14802 1390 aaPredicted RBP9.03□□□□□ -0.96
LINC00173-202ENST00000477702 CSB-PGBD3P0DP91 1061 aa9.03□□□□□ -0.96
LINC00173-202ENST00000477702 FDX1P10109 184 aa9.03□□□□□ -0.96
LINC00173-202ENST00000477702 ATP6V1AP38606 617 aa9.03□□□□□ -0.96
LINC00173-202ENST00000477702 MORN1Q5T089 497 aa9.03□□□□□ -0.96
LINC00173-202ENST00000477702 SYMPKQ92797 1274 aaKnown RBP9.03□□□□□ -0.96
LINC00173-202ENST00000477702 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.03□□□□□ -0.96
LINC00173-202ENST00000477702 CDK19Q9BWU1 502 aa9.03□□□□□ -0.96
LINC00173-202ENST00000477702 TFCP2L1Q9NZI6 479 aa9.03□□□□□ -0.96
LINC00173-202ENST00000477702 ADGRB1O14514 1584 aa9.03□□□□□ -0.96
LINC00173-202ENST00000477702 ITSN1Q15811 1721 aa9.02□□□□□ -0.96
LINC00173-202ENST00000477702 MSL1Q68DK7 614 aa9.02□□□□□ -0.97
LINC00173-202ENST00000477702 SLC27A5Q9Y2P5 690 aa9.02□□□□□ -0.97
LINC00173-202ENST00000477702 USP6P35125 1406 aa9.02□□□□□ -0.97
LINC00173-202ENST00000477702 BRD4O60885 1362 aaPredicted RBP9.01□□□□□ -0.97
LINC00173-202ENST00000477702 BLOC1S3Q6QNY0 202 aa9.01□□□□□ -0.97
LINC00173-202ENST00000477702 RNF166Q96A37 237 aaPredicted RBP9.01□□□□□ -0.97
LINC00173-202ENST00000477702 CARD10Q9BWT7 1032 aa9.01□□□□□ -0.97
LINC00173-202ENST00000477702 WNK3Q9BYP7 1800 aa9.01□□□□□ -0.97
LINC00173-202ENST00000477702 NHSQ6T4R5 1651 aa9□□□□□ -0.97
LINC00173-202ENST00000477702 COPS2P61201 443 aa9□□□□□ -0.97
LINC00173-202ENST00000477702 RTL5Q5HYW3 569 aaPredicted RBP9□□□□□ -0.97
LINC00173-202ENST00000477702 NECTIN2Q92692 538 aa9□□□□□ -0.97
LINC00173-202ENST00000477702 MPHOSPH9Q99550 1183 aa9□□□□□ -0.97
LINC00173-202ENST00000477702 PCDHB3Q9Y5E6 796 aa9□□□□□ -0.97
LINC00173-202ENST00000477702 KAT6BQ8WYB5 2073 aa9□□□□□ -0.97
LINC00173-202ENST00000477702 TNS2Q63HR2 1409 aa8.99□□□□□ -0.97
LINC00173-202ENST00000477702 BTAF1O14981 1849 aa8.99□□□□□ -0.97
LINC00173-202ENST00000477702 KLRG1Q96E93 195 aa8.99□□□□□ -0.97
LINC00173-202ENST00000477702 PCNTO95613 3336 aa8.99□□□□□ -0.97
LINC00173-202ENST00000477702 COL24A1Q17RW2 1714 aa8.99□□□□□ -0.97
LINC00173-202ENST00000477702 LILRB3O75022 631 aa8.98□□□□□ -0.97
LINC00173-202ENST00000477702 TOMM70O94826 608 aa8.98□□□□□ -0.97
LINC00173-202ENST00000477702 GJA5P36382 358 aa8.98□□□□□ -0.97
LINC00173-202ENST00000477702 RNF19BQ6ZMZ0 732 aa8.98□□□□□ -0.97
LINC00173-202ENST00000477702 PRR14Q9BWN1 585 aa8.98□□□□□ -0.97
LINC00173-202ENST00000477702 COL18A1P39060 1754 aa8.98□□□□□ -0.97
LINC00173-202ENST00000477702 TUBGCP6Q96RT7 1819 aa8.97□□□□□ -0.97
LINC00173-202ENST00000477702 MMRN1Q13201 1228 aa8.97□□□□□ -0.97
LINC00173-202ENST00000477702 GRIPAP1Q4V328 841 aa8.97□□□□□ -0.97
LINC00173-202ENST00000477702 SLC27A3Q5K4L6 730 aa8.97□□□□□ -0.97
LINC00173-202ENST00000477702 COL23A1Q86Y22 540 aaPredicted RBP8.97□□□□□ -0.97
LINC00173-202ENST00000477702 SCUBE3Q8IX30 993 aa8.97□□□□□ -0.97
LINC00173-202ENST00000477702 JMYQ8N9B5 988 aa8.97□□□□□ -0.97
LINC00173-202ENST00000477702 CD2APQ9Y5K6 639 aa8.97□□□□□ -0.97
LINC00173-202ENST00000477702 CPSF1Q10570 1443 aaKnown RBP8.97□□□□□ -0.97
LINC00173-202ENST00000477702 PPIP5K1Q6PFW1 1433 aa8.97□□□□□ -0.97
LINC00173-202ENST00000477702 C6orf229H3BNL8 230 aa8.96□□□□□ -0.98
LINC00173-202ENST00000477702 RFC5P40937 340 aa8.96□□□□□ -0.98
LINC00173-202ENST00000477702 TUSC1Q2TAM9 212 aa8.96□□□□□ -0.98
LINC00173-202ENST00000477702 ARHGEF25Q86VW2 580 aa8.96□□□□□ -0.98
LINC00173-202ENST00000477702 MTRQ99707 1265 aa8.96□□□□□ -0.98
LINC00173-202ENST00000477702 NMRK2Q9NPI5 230 aa8.96□□□□□ -0.98
LINC00173-202ENST00000477702 ARHGEF28Q8N1W1 1705 aaKnown RBP8.96□□□□□ -0.98
LINC00173-202ENST00000477702 SLIT3O75094 1523 aa8.95□□□□□ -0.98
LINC00173-202ENST00000477702 QSER1Q2KHR3 1735 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms