RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 C5P01031 1676 aa9.97□□□□□ -0.81
BRCA1-214ENST00000477152 TUBGCP6Q96RT7 1819 aa9.96□□□□□ -0.81
BRCA1-214ENST00000477152 C3orf80F5H4A9 247 aa9.96□□□□□ -0.81
BRCA1-214ENST00000477152 PPM1GO15355 546 aaPredicted RBP9.96□□□□□ -0.81
BRCA1-214ENST00000477152 HSP90AB2PQ58FF8 381 aa9.96□□□□□ -0.81
BRCA1-214ENST00000477152 MPRIPQ6WCQ1 1025 aa9.96□□□□□ -0.81
BRCA1-214ENST00000477152 USHBP1Q8N6Y0 703 aa9.96□□□□□ -0.81
BRCA1-214ENST00000477152 DDRGK1Q96HY6 314 aa9.96□□□□□ -0.81
BRCA1-214ENST00000477152 TMUB1Q9BVT8 246 aa9.96□□□□□ -0.81
BRCA1-214ENST00000477152 MAP2P11137 1827 aaKnown RBP9.96□□□□□ -0.82
BRCA1-214ENST00000477152 PALLDQ8WX93 1383 aa9.96□□□□□ -0.82
BRCA1-214ENST00000477152 PLEKHG2Q9H7P9 1386 aa9.96□□□□□ -0.82
BRCA1-214ENST00000477152 OTUD5Q96G74 571 aa9.95□□□□□ -0.82
BRCA1-214ENST00000477152 CDCA7LQ96GN5 454 aa9.95□□□□□ -0.82
BRCA1-214ENST00000477152 FBLN1P23142 703 aa9.95□□□□□ -0.82
BRCA1-214ENST00000477152 CD2APQ9Y5K6 639 aa9.95□□□□□ -0.82
BRCA1-214ENST00000477152 ITGB4P16144 1822 aa9.94□□□□□ -0.82
BRCA1-214ENST00000477152 PKD1L3Q7Z443 1732 aa9.94□□□□□ -0.82
BRCA1-214ENST00000477152 HSP90AB1P08238 724 aaKnown RBP9.94□□□□□ -0.82
BRCA1-214ENST00000477152 PRSS12P56730 875 aa9.94□□□□□ -0.82
BRCA1-214ENST00000477152 PXYLP1Q8TE99 480 aa9.94□□□□□ -0.82
BRCA1-214ENST00000477152 TAF1LQ8IZX4 1826 aa9.94□□□□□ -0.82
BRCA1-214ENST00000477152 WASHC2AQ641Q2 1341 aa9.94□□□□□ -0.82
BRCA1-214ENST00000477152 COL23A1Q86Y22 540 aaPredicted RBP9.94□□□□□ -0.82
BRCA1-214ENST00000477152 IFNL2Q8IZJ0 200 aa9.94□□□□□ -0.82
BRCA1-214ENST00000477152 TTC13Q8NBP0 860 aa9.94□□□□□ -0.82
BRCA1-214ENST00000477152 GPCPD1Q9NPB8 672 aa9.94□□□□□ -0.82
BRCA1-214ENST00000477152 TMOD3Q9NYL9 352 aa9.94□□□□□ -0.82
BRCA1-214ENST00000477152 GIGYF1O75420 1035 aaPredicted RBP9.93□□□□□ -0.82
BRCA1-214ENST00000477152 KCNQ4P56696 695 aa9.93□□□□□ -0.82
BRCA1-214ENST00000477152 POLR3GLQ9BT43 218 aa9.93□□□□□ -0.82
BRCA1-214ENST00000477152 ANKRD26Q9UPS8 1709 aa9.92□□□□□ -0.82
BRCA1-214ENST00000477152 SSTR3P32745 418 aaPredicted RBP9.92□□□□□ -0.82
BRCA1-214ENST00000477152 CLCN1P35523 988 aa9.92□□□□□ -0.82
BRCA1-214ENST00000477152 SSFA2P28290 1259 aa9.92□□□□□ -0.82
BRCA1-214ENST00000477152 C1QTNF8P60827 252 aa9.92□□□□□ -0.82
BRCA1-214ENST00000477152 PPP4R3BQ5MIZ7 849 aa9.92□□□□□ -0.82
BRCA1-214ENST00000477152 TSKSQ9UJT2 592 aa9.92□□□□□ -0.82
BRCA1-214ENST00000477152 EMILIN1Q9Y6C2 1016 aa9.92□□□□□ -0.82
BRCA1-214ENST00000477152 C4BP0C0L5 1744 aa9.92□□□□□ -0.82
BRCA1-214ENST00000477152 CYP27B1O15528 508 aa9.91□□□□□ -0.82
BRCA1-214ENST00000477152 EIF4G2P78344 907 aaKnown RBP eCLIP9.91□□□□□ -0.82
BRCA1-214ENST00000477152 CARD14Q9BXL6 1004 aa9.91□□□□□ -0.82
BRCA1-214ENST00000477152 BCL2L12Q9HB09 334 aa9.91□□□□□ -0.82
BRCA1-214ENST00000477152 SENP3-EIF4A1A0A087X0R7 540 aa9.9□□□□□ -0.82
BRCA1-214ENST00000477152 OATP04181 439 aa9.9□□□□□ -0.82
BRCA1-214ENST00000477152 HOXB1P14653 301 aaPredicted RBP9.9□□□□□ -0.82
BRCA1-214ENST00000477152 PLEKHO1Q53GL0 409 aaPredicted RBP9.9□□□□□ -0.82
BRCA1-214ENST00000477152 NCAPD2Q15021 1401 aa9.9□□□□□ -0.82
BRCA1-214ENST00000477152 LOC102724428A0A0B4J2F2 783 aa9.9□□□□□ -0.83
BRCA1-214ENST00000477152 SIK1P57059 783 aa9.9□□□□□ -0.83
BRCA1-214ENST00000477152 AMOTQ4VCS5 1084 aa9.9□□□□□ -0.83
BRCA1-214ENST00000477152 MSL1Q68DK7 614 aa9.9□□□□□ -0.83
BRCA1-214ENST00000477152 EYA1Q99502 592 aa9.9□□□□□ -0.83
BRCA1-214ENST00000477152 ATP6V1AP38606 617 aa9.89□□□□□ -0.83
BRCA1-214ENST00000477152 NLGN2Q8NFZ4 835 aa9.89□□□□□ -0.83
BRCA1-214ENST00000477152 PIGBQ92521 554 aa9.89□□□□□ -0.83
BRCA1-214ENST00000477152 PCGF6Q9BYE7 350 aa9.89□□□□□ -0.83
BRCA1-214ENST00000477152 FAM217BQ9NTX9 383 aaPredicted RBP9.89□□□□□ -0.83
BRCA1-214ENST00000477152 ERVV-2B6SEH9 535 aa9.88□□□□□ -0.83
BRCA1-214ENST00000477152 PHKG2P15735 406 aa9.88□□□□□ -0.83
BRCA1-214ENST00000477152 BEGAINQ9BUH8 593 aa9.88□□□□□ -0.83
BRCA1-214ENST00000477152 POLKQ9UBT6 870 aa9.88□□□□□ -0.83
BRCA1-214ENST00000477152 DAXXQ9UER7 740 aaPredicted RBP9.88□□□□□ -0.83
BRCA1-214ENST00000477152 UBR3Q6ZT12 1888 aa9.88□□□□□ -0.83
BRCA1-214ENST00000477152 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.88□□□□□ -0.83
BRCA1-214ENST00000477152 PROX2Q3B8N5 592 aa9.88□□□□□ -0.83
BRCA1-214ENST00000477152 C1orf141Q5JVX7 400 aa9.88□□□□□ -0.83
BRCA1-214ENST00000477152 DCAF5Q96JK2 942 aa9.88□□□□□ -0.83
BRCA1-214ENST00000477152 RBM27Q9P2N5 1060 aaKnown RBP9.88□□□□□ -0.83
BRCA1-214ENST00000477152 RTCBQ9Y3I0 505 aaKnown RBP9.88□□□□□ -0.83
BRCA1-214ENST00000477152 TOGARAM1Q9Y4F4 1720 aa9.88□□□□□ -0.83
BRCA1-214ENST00000477152 TRAPPC3LQ5T215 181 aa9.87□□□□□ -0.83
BRCA1-214ENST00000477152 NLGN1Q8N2Q7 840 aa9.87□□□□□ -0.83
BRCA1-214ENST00000477152 SMAPO00193 183 aa9.86□□□□□ -0.83
BRCA1-214ENST00000477152 PTPREP23469 700 aa9.86□□□□□ -0.83
BRCA1-214ENST00000477152 MORC1Q86VD1 984 aa9.86□□□□□ -0.83
BRCA1-214ENST00000477152 KCNK17Q96T54 332 aa9.86□□□□□ -0.83
BRCA1-214ENST00000477152 KNSTRNQ9Y448 316 aa9.86□□□□□ -0.83
BRCA1-214ENST00000477152 ZNF831Q5JPB2 1677 aa9.86□□□□□ -0.83
BRCA1-214ENST00000477152 TNNT2P45379 298 aaPredicted RBP9.86□□□□□ -0.83
BRCA1-214ENST00000477152 CABP4P57796 275 aa9.86□□□□□ -0.83
BRCA1-214ENST00000477152 EIF4A2Q14240 407 aaKnown RBP9.86□□□□□ -0.83
BRCA1-214ENST00000477152 RC3H1Q5TC82 1133 aaKnown RBP9.86□□□□□ -0.83
BRCA1-214ENST00000477152 NUDT18Q6ZVK8 323 aa9.86□□□□□ -0.83
BRCA1-214ENST00000477152 SNPHO15079 494 aa9.85□□□□□ -0.83
BRCA1-214ENST00000477152 ERICH6Q7L0X2 663 aa9.85□□□□□ -0.83
BRCA1-214ENST00000477152 IGSF1Q8N6C5 1336 aa9.85□□□□□ -0.83
BRCA1-214ENST00000477152 RCCD1A6NED2 376 aa9.84□□□□□ -0.83
BRCA1-214ENST00000477152 YBX3P16989 372 aaKnown RBP eCLIP9.84□□□□□ -0.83
BRCA1-214ENST00000477152 RFC4P35249 363 aa9.84□□□□□ -0.83
BRCA1-214ENST00000477152 TGFB2P61812 414 aa9.84□□□□□ -0.83
BRCA1-214ENST00000477152 PANK3Q9H999 370 aa9.84□□□□□ -0.83
BRCA1-214ENST00000477152 CCDC87Q9NVE4 849 aa9.84□□□□□ -0.83
BRCA1-214ENST00000477152 POLR3EQ9NVU0 708 aa9.84□□□□□ -0.83
BRCA1-214ENST00000477152 ASAP1Q9ULH1 1129 aa9.84□□□□□ -0.83
BRCA1-214ENST00000477152 PPP1R3GB7ZBB8 358 aa9.84□□□□□ -0.83
BRCA1-214ENST00000477152 PSEN2P49810 448 aa9.84□□□□□ -0.83
BRCA1-214ENST00000477152 MTHFSP49914 203 aa9.84□□□□□ -0.83
BRCA1-214ENST00000477152 ZNF530Q6P9A1 599 aaPredicted RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms