RNA–Protein interactions for RNA: ENST00000475580.5

VPS8-222, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 318 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-222ENST00000475580 SETDB2Q96T68 719 aa21.61■■□□□ 1.05
VPS8-222ENST00000475580 NUP98P52948 1817 aa21.6■■□□□ 1.05
VPS8-222ENST00000475580 ARFGEF1Q9Y6D6 1849 aa21.6■■□□□ 1.05
VPS8-222ENST00000475580 SENP3-EIF4A1A0A087X0R7 540 aa21.6■■□□□ 1.05
VPS8-222ENST00000475580 PROSER3Q2NL68 480 aa21.6■■□□□ 1.05
VPS8-222ENST00000475580 IFT57Q9NWB7 429 aa21.6■■□□□ 1.05
VPS8-222ENST00000475580 BCS1LQ9Y276 419 aa21.59■■□□□ 1.05
VPS8-222ENST00000475580 ZNF652Q9Y2D9 606 aa21.59■■□□□ 1.05
VPS8-222ENST00000475580 MAP3K15Q6ZN16 1313 aa21.58■■□□□ 1.05
VPS8-222ENST00000475580 ERVV-1B6SEH8 477 aa21.58■■□□□ 1.05
VPS8-222ENST00000475580 ANXA1P04083 346 aa21.58■■□□□ 1.05
VPS8-222ENST00000475580 CCDC27Q2M243 656 aa21.58■■□□□ 1.05
VPS8-222ENST00000475580 CCDC24Q8N4L8 307 aa21.58■■□□□ 1.05
VPS8-222ENST00000475580 NECTIN2Q92692 538 aa21.58■■□□□ 1.05
VPS8-222ENST00000475580 PIM2Q9P1W9 311 aa21.58■■□□□ 1.05
VPS8-222ENST00000475580 COL11A2P13942 1736 aaPredicted RBP21.58■■□□□ 1.04
VPS8-222ENST00000475580 GNAI1P63096 354 aa21.57■■□□□ 1.04
VPS8-222ENST00000475580 CALD1Q05682 793 aaKnown RBP21.57■■□□□ 1.04
VPS8-222ENST00000475580 HOXB7P09629 217 aa21.56■■□□□ 1.04
VPS8-222ENST00000475580 CNBD1Q8NA66 436 aa21.56■■□□□ 1.04
VPS8-222ENST00000475580 NIP7Q9Y221 180 aaKnown RBP eCLIP21.56■■□□□ 1.04
VPS8-222ENST00000475580 ATP10DQ9P241 1426 aa21.55■■□□□ 1.04
VPS8-222ENST00000475580 NCBP3Q53F19 620 aaKnown RBP21.55■■□□□ 1.04
VPS8-222ENST00000475580 DALRD3Q5D0E6 543 aaKnown RBP21.55■■□□□ 1.04
VPS8-222ENST00000475580 KIF6Q6ZMV9 814 aa21.55■■□□□ 1.04
VPS8-222ENST00000475580 WWC1Q8IX03 1113 aa21.55■■□□□ 1.04
VPS8-222ENST00000475580 BRIP1Q9BX63 1249 aa21.55■■□□□ 1.04
VPS8-222ENST00000475580 ZBTB3Q9H5J0 574 aa21.55■■□□□ 1.04
VPS8-222ENST00000475580 DUSP27Q5VZP5 1158 aa21.54■■□□□ 1.04
VPS8-222ENST00000475580 C2CD5Q86YS7 1000 aa21.54■■□□□ 1.04
VPS8-222ENST00000475580 ZNF784Q8NCA9 323 aaPredicted RBP21.54■■□□□ 1.04
VPS8-222ENST00000475580 HDGFL1Q5TGJ6 251 aa21.53■■□□□ 1.04
VPS8-222ENST00000475580 NBPF5PQ86XG9 351 aaPredicted RBP21.53■■□□□ 1.04
VPS8-222ENST00000475580 DDX21Q9NR30 783 aaKnown RBP eCLIP21.53■■□□□ 1.04
VPS8-222ENST00000475580 CHPF2Q9P2E5 772 aa21.53■■□□□ 1.04
VPS8-222ENST00000475580 GIGYF2Q6Y7W6 1299 aaKnown RBP21.52■■□□□ 1.04
VPS8-222ENST00000475580 UBN2Q6ZU65 1347 aa21.52■■□□□ 1.03
VPS8-222ENST00000475580 ADCY9O60503 1353 aa21.51■■□□□ 1.03
VPS8-222ENST00000475580 H0YIN7 160 aa21.51■■□□□ 1.03
VPS8-222ENST00000475580 PDE6BP35913 854 aa21.51■■□□□ 1.03
VPS8-222ENST00000475580 ST5P78524 1137 aa21.51■■□□□ 1.03
VPS8-222ENST00000475580 COPS6Q7L5N1 327 aa21.51■■□□□ 1.03
VPS8-222ENST00000475580 FAM9BQ8IZU0 186 aa21.51■■□□□ 1.03
VPS8-222ENST00000475580 XAGE3Q8WTP9 111 aa21.51■■□□□ 1.03
VPS8-222ENST00000475580 ZNF34Q8IZ26 560 aa21.5■■□□□ 1.03
VPS8-222ENST00000475580 C8orf58Q8NAV2 365 aa21.5■■□□□ 1.03
VPS8-222ENST00000475580 ANKRD36CQ5JPF3 1778 aa21.49■■□□□ 1.03
VPS8-222ENST00000475580 FAM177BA6PVY3 158 aa21.49■■□□□ 1.03
VPS8-222ENST00000475580 NPHP1O15259 732 aa21.49■■□□□ 1.03
VPS8-222ENST00000475580 TPTE2Q6XPS3 522 aa21.49■■□□□ 1.03
VPS8-222ENST00000475580 ARHGAP27Q6ZUM4 889 aa21.49■■□□□ 1.03
VPS8-222ENST00000475580 TTLL6Q8N841 843 aa21.49■■□□□ 1.03
VPS8-222ENST00000475580 TSR2Q969E8 191 aaKnown RBP21.49■■□□□ 1.03
VPS8-222ENST00000475580 PDZRN3Q9UPQ7 1066 aa21.49■■□□□ 1.03
VPS8-222ENST00000475580 TNRC6CQ9HCJ0 1690 aaKnown RBP21.49■■□□□ 1.03
VPS8-222ENST00000475580 IL16Q14005 1332 aa21.49■■□□□ 1.03
VPS8-222ENST00000475580 ELL2O00472 640 aaPredicted RBP21.48■■□□□ 1.03
VPS8-222ENST00000475580 GPTP24298 496 aa21.48■■□□□ 1.03
VPS8-222ENST00000475580 AIMP1Q12904 312 aaKnown RBP21.48■■□□□ 1.03
VPS8-222ENST00000475580 ABCC12Q96J65 1359 aa21.48■■□□□ 1.03
VPS8-222ENST00000475580 IBTKQ9P2D0 1353 aaPredicted RBP21.48■■□□□ 1.03
VPS8-222ENST00000475580 KLRG2A4D1S0 409 aaPredicted RBP21.47■■□□□ 1.03
VPS8-222ENST00000475580 SRGNP10124 158 aa21.47■■□□□ 1.03
VPS8-222ENST00000475580 SUSD4Q5VX71 490 aa21.47■■□□□ 1.03
VPS8-222ENST00000475580 DBF4Q9UBU7 674 aaPredicted RBP21.47■■□□□ 1.03
VPS8-222ENST00000475580 SALL2Q9Y467 1007 aaPredicted RBP21.47■■□□□ 1.03
VPS8-222ENST00000475580 ARFGEF2Q9Y6D5 1785 aa21.46■■□□□ 1.03
VPS8-222ENST00000475580 NUTM1Q86Y26 1132 aa21.46■■□□□ 1.03
VPS8-222ENST00000475580 TSPYL6Q8N831 410 aa21.46■■□□□ 1.03
VPS8-222ENST00000475580 ZNF622Q969S3 477 aaKnown RBP eCLIP21.46■■□□□ 1.03
VPS8-222ENST00000475580 NTSR2O95665 410 aa21.45■■□□□ 1.02
VPS8-222ENST00000475580 STYK1Q6J9G0 422 aa21.45■■□□□ 1.02
VPS8-222ENST00000475580 SLX4Q8IY92 1834 aa21.45■■□□□ 1.02
VPS8-222ENST00000475580 CACNA1SQ13698 1873 aa21.45■■□□□ 1.02
VPS8-222ENST00000475580 ERFEQ4G0M1 354 aa21.44■■□□□ 1.02
VPS8-222ENST00000475580 NYXQ9GZU5 481 aa21.44■■□□□ 1.02
VPS8-222ENST00000475580 HYPKQ9NX55 129 aa21.44■■□□□ 1.02
VPS8-222ENST00000475580 SBF1O95248 1867 aa21.43■■□□□ 1.02
VPS8-222ENST00000475580 PARP10Q53GL7 1025 aa21.43■■□□□ 1.02
VPS8-222ENST00000475580 WDR63Q8IWG1 891 aa21.43■■□□□ 1.02
VPS8-222ENST00000475580 MASTLQ96GX5 879 aa21.43■■□□□ 1.02
VPS8-222ENST00000475580 RIC1Q4ADV7 1423 aa21.43■■□□□ 1.02
VPS8-222ENST00000475580 PLBD2Q8NHP8 589 aa21.42■■□□□ 1.02
VPS8-222ENST00000475580 FANCIQ9NVI1 1328 aa21.41■■□□□ 1.02
VPS8-222ENST00000475580 GTF2E1P29083 439 aaPredicted RBP21.41■■□□□ 1.02
VPS8-222ENST00000475580 TCIRG1Q13488 830 aa21.41■■□□□ 1.02
VPS8-222ENST00000475580 HSP90AB3PQ58FF7 597 aa21.41■■□□□ 1.02
VPS8-222ENST00000475580 CNKSR1Q969H4 720 aa21.41■■□□□ 1.02
VPS8-222ENST00000475580 PHAXQ9H814 394 aaKnown RBP21.41■■□□□ 1.02
VPS8-222ENST00000475580 SPINK5Q9NQ38 1064 aaPredicted RBP21.41■■□□□ 1.02
VPS8-222ENST00000475580 NPR1P16066 1061 aa21.4■■□□□ 1.02
VPS8-222ENST00000475580 PRELPP51888 382 aa21.4■■□□□ 1.02
VPS8-222ENST00000475580 RASSF7Q02833 373 aa21.4■■□□□ 1.02
VPS8-222ENST00000475580 CRY2Q49AN0 593 aa21.4■■□□□ 1.02
VPS8-222ENST00000475580 ANKRD13DQ6ZTN6 518 aa21.4■■□□□ 1.02
VPS8-222ENST00000475580 PPP1R42Q7Z4L9 355 aa21.4■■□□□ 1.02
VPS8-222ENST00000475580 NLRP10Q86W26 655 aa21.4■■□□□ 1.02
VPS8-222ENST00000475580 FER1L6Q2WGJ9 1857 aa21.39■■□□□ 1.02
VPS8-222ENST00000475580 NFKBIEO00221 500 aa21.39■■□□□ 1.01
VPS8-222ENST00000475580 C21orf2O43822 256 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms