RNA–Protein interactions for RNA: ENST00000474637.5

GAPVD1-216, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,545 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-216ENST00000474637 C4AP0C0L4 1744 aa5.33□□□□□ -1.56
GAPVD1-216ENST00000474637 PDE4AP27815 886 aa5.32□□□□□ -1.56
GAPVD1-216ENST00000474637 CANXP27824 592 aaKnown RBP5.32□□□□□ -1.56
GAPVD1-216ENST00000474637 EIF5P55010 431 aaKnown RBP5.32□□□□□ -1.56
GAPVD1-216ENST00000474637 SPINK5Q9NQ38 1064 aaPredicted RBP5.32□□□□□ -1.56
GAPVD1-216ENST00000474637 PPP1R1BQ9UD71 204 aaPredicted RBP5.32□□□□□ -1.56
GAPVD1-216ENST00000474637 NARFQ9UHQ1 456 aa5.32□□□□□ -1.56
GAPVD1-216ENST00000474637 USP42Q9H9J4 1324 aaKnown RBP5.32□□□□□ -1.56
GAPVD1-216ENST00000474637 ZBTB47Q9UFB7 747 aaPredicted RBP5.32□□□□□ -1.56
GAPVD1-216ENST00000474637 A1BGP04217 495 aa5.31□□□□□ -1.56
GAPVD1-216ENST00000474637 PTGER2P43116 358 aa5.31□□□□□ -1.56
GAPVD1-216ENST00000474637 SLFN5Q08AF3 891 aa5.31□□□□□ -1.56
GAPVD1-216ENST00000474637 SGIP1Q9BQI5 828 aa5.31□□□□□ -1.56
GAPVD1-216ENST00000474637 PDGFDQ9GZP0 370 aaPredicted RBP5.31□□□□□ -1.56
GAPVD1-216ENST00000474637 SCN7AQ01118 1682 aa5.31□□□□□ -1.56
GAPVD1-216ENST00000474637 ZNF521Q96K83 1311 aa5.31□□□□□ -1.56
GAPVD1-216ENST00000474637 BCORQ6W2J9 1755 aa5.31□□□□□ -1.56
GAPVD1-216ENST00000474637 PRAMEF22A3QJZ6 481 aa5.31□□□□□ -1.56
GAPVD1-216ENST00000474637 E9PSI1 815 aa5.31□□□□□ -1.56
GAPVD1-216ENST00000474637 GYS1P13807 737 aa5.31□□□□□ -1.56
GAPVD1-216ENST00000474637 HDGFL1Q5TGJ6 251 aa5.31□□□□□ -1.56
GAPVD1-216ENST00000474637 CLEC4GQ6UXB4 293 aa5.31□□□□□ -1.56
GAPVD1-216ENST00000474637 KIF6Q6ZMV9 814 aa5.31□□□□□ -1.56
GAPVD1-216ENST00000474637 AMIGO3Q86WK7 504 aa5.31□□□□□ -1.56
GAPVD1-216ENST00000474637 UBE2Q2Q8WVN8 375 aa5.31□□□□□ -1.56
GAPVD1-216ENST00000474637 ARXQ96QS3 562 aa5.31□□□□□ -1.56
GAPVD1-216ENST00000474637 BACH2Q9BYV9 841 aa5.31□□□□□ -1.56
GAPVD1-216ENST00000474637 ZNF652Q9Y2D9 606 aa5.31□□□□□ -1.56
GAPVD1-216ENST00000474637 ERVV-1B6SEH8 477 aa5.3□□□□□ -1.56
GAPVD1-216ENST00000474637 EIF2S2P20042 333 aaKnown RBP5.3□□□□□ -1.56
GAPVD1-216ENST00000474637 USPL1Q5W0Q7 1092 aa5.3□□□□□ -1.56
GAPVD1-216ENST00000474637 DZIP3Q86Y13 1208 aaKnown RBP5.3□□□□□ -1.56
GAPVD1-216ENST00000474637 PARP3Q9Y6F1 533 aa5.3□□□□□ -1.56
GAPVD1-216ENST00000474637 NBPF26B4DH59 902 aa5.3□□□□□ -1.56
GAPVD1-216ENST00000474637 BCAR3O75815 825 aa5.3□□□□□ -1.56
GAPVD1-216ENST00000474637 CCDC30Q5VVM6 783 aa5.3□□□□□ -1.56
GAPVD1-216ENST00000474637 MSL1Q68DK7 614 aa5.3□□□□□ -1.56
GAPVD1-216ENST00000474637 NBPF10Q6P3W6 841 aaKnown RBP5.3□□□□□ -1.56
GAPVD1-216ENST00000474637 TRMT2AQ8IZ69 625 aaKnown RBP5.3□□□□□ -1.56
GAPVD1-216ENST00000474637 NBPF15Q8N660 670 aa5.3□□□□□ -1.56
GAPVD1-216ENST00000474637 DDX21Q9NR30 783 aaKnown RBP eCLIP5.3□□□□□ -1.56
GAPVD1-216ENST00000474637 HYPKQ9NX55 129 aa5.3□□□□□ -1.56
GAPVD1-216ENST00000474637 DBF4Q9UBU7 674 aaPredicted RBP5.3□□□□□ -1.56
GAPVD1-216ENST00000474637 SRP68Q9UHB9 627 aaKnown RBP5.3□□□□□ -1.56
GAPVD1-216ENST00000474637 ZNF330Q9Y3S2 320 aaPredicted RBP5.3□□□□□ -1.56
GAPVD1-216ENST00000474637 CAMTA2O94983 1202 aa5.29□□□□□ -1.56
GAPVD1-216ENST00000474637 MMP10P09238 476 aa5.29□□□□□ -1.56
GAPVD1-216ENST00000474637 MS4A1P11836 297 aa5.29□□□□□ -1.56
GAPVD1-216ENST00000474637 SMIM5Q71RC9 77 aa5.29□□□□□ -1.56
GAPVD1-216ENST00000474637 TSR2Q969E8 191 aaKnown RBP5.29□□□□□ -1.56
GAPVD1-216ENST00000474637 CD2APQ9Y5K6 639 aa5.29□□□□□ -1.56
GAPVD1-216ENST00000474637 MYL6BP14649 208 aa5.29□□□□□ -1.56
GAPVD1-216ENST00000474637 TM4SF1P30408 202 aa5.29□□□□□ -1.56
GAPVD1-216ENST00000474637 PDIA6Q15084 440 aa5.29□□□□□ -1.56
GAPVD1-216ENST00000474637 TWISTNBQ3B726 338 aaPredicted RBP5.29□□□□□ -1.56
GAPVD1-216ENST00000474637 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.29□□□□□ -1.56
GAPVD1-216ENST00000474637 C8orf58Q8NAV2 365 aa5.29□□□□□ -1.56
GAPVD1-216ENST00000474637 STK31Q9BXU1 1019 aa5.29□□□□□ -1.56
GAPVD1-216ENST00000474637 TBC1D2BQ9UPU7 963 aa5.29□□□□□ -1.56
GAPVD1-216ENST00000474637 MAP3K15Q6ZN16 1313 aa5.29□□□□□ -1.56
GAPVD1-216ENST00000474637 CACNA1FO60840 1977 aa5.28□□□□□ -1.56
GAPVD1-216ENST00000474637 KRT24Q2M2I5 525 aa5.28□□□□□ -1.56
GAPVD1-216ENST00000474637 HSP90AB3PQ58FF7 597 aa5.28□□□□□ -1.56
GAPVD1-216ENST00000474637 SETDB2Q96T68 719 aa5.28□□□□□ -1.56
GAPVD1-216ENST00000474637 CHPF2Q9P2E5 772 aa5.28□□□□□ -1.56
GAPVD1-216ENST00000474637 CARMIL3Q8ND23 1372 aa5.28□□□□□ -1.56
GAPVD1-216ENST00000474637 KIF13BQ9NQT8 1826 aa5.28□□□□□ -1.56
GAPVD1-216ENST00000474637 NRXN2Q9P2S2 1712 aa5.28□□□□□ -1.56
GAPVD1-216ENST00000474637 ATP10DQ9P241 1426 aa5.28□□□□□ -1.56
GAPVD1-216ENST00000474637 POLRMTO00411 1230 aaKnown RBP5.28□□□□□ -1.56
GAPVD1-216ENST00000474637 CT47B1P0C2W7 299 aaPredicted RBP5.28□□□□□ -1.56
GAPVD1-216ENST00000474637 PIP4K2AP48426 406 aaPredicted RBP5.28□□□□□ -1.56
GAPVD1-216ENST00000474637 EXOSC9Q06265 439 aaKnown RBP5.28□□□□□ -1.56
GAPVD1-216ENST00000474637 NECTIN2Q92692 538 aa5.28□□□□□ -1.56
GAPVD1-216ENST00000474637 ZNF428Q96B54 188 aa5.28□□□□□ -1.56
GAPVD1-216ENST00000474637 BCL2L12Q9HB09 334 aa5.28□□□□□ -1.56
GAPVD1-216ENST00000474637 PDZRN3Q9UPQ7 1066 aa5.28□□□□□ -1.56
GAPVD1-216ENST00000474637 NUP98P52948 1817 aa5.27□□□□□ -1.57
GAPVD1-216ENST00000474637 C10orf71Q711Q0 1435 aa5.27□□□□□ -1.57
GAPVD1-216ENST00000474637 IBTKQ9P2D0 1353 aaPredicted RBP5.27□□□□□ -1.57
GAPVD1-216ENST00000474637 ELL2O00472 640 aaPredicted RBP5.27□□□□□ -1.57
GAPVD1-216ENST00000474637 VAMP4O75379 141 aa5.27□□□□□ -1.57
GAPVD1-216ENST00000474637 DDX58O95786 925 aaKnown RBP5.27□□□□□ -1.57
GAPVD1-216ENST00000474637 TGFB2P61812 414 aa5.27□□□□□ -1.57
GAPVD1-216ENST00000474637 NFIXQ14938 502 aa5.27□□□□□ -1.57
GAPVD1-216ENST00000474637 TBC1D9BQ66K14 1250 aa5.27□□□□□ -1.57
GAPVD1-216ENST00000474637 GIGYF2Q6Y7W6 1299 aaKnown RBP5.27□□□□□ -1.57
GAPVD1-216ENST00000474637 COPS6Q7L5N1 327 aa5.27□□□□□ -1.57
GAPVD1-216ENST00000474637 LRP10Q7Z4F1 713 aa5.27□□□□□ -1.57
GAPVD1-216ENST00000474637 TSPYL6Q8N831 410 aa5.27□□□□□ -1.57
GAPVD1-216ENST00000474637 XAGE3Q8WTP9 111 aa5.27□□□□□ -1.57
GAPVD1-216ENST00000474637 FHDC1Q9C0D6 1143 aaPredicted RBP5.27□□□□□ -1.57
GAPVD1-216ENST00000474637 NYXQ9GZU5 481 aa5.27□□□□□ -1.57
GAPVD1-216ENST00000474637 ZNF219Q9P2Y4 722 aaPredicted RBP5.27□□□□□ -1.57
GAPVD1-216ENST00000474637 KDM2BQ8NHM5 1336 aa5.27□□□□□ -1.57
GAPVD1-216ENST00000474637 SERPINB2P05120 415 aa5.27□□□□□ -1.57
GAPVD1-216ENST00000474637 ST5P78524 1137 aa5.27□□□□□ -1.57
GAPVD1-216ENST00000474637 C1QBPQ07021 282 aaKnown RBP5.27□□□□□ -1.57
GAPVD1-216ENST00000474637 DDR1Q08345 913 aa5.27□□□□□ -1.57
GAPVD1-216ENST00000474637 PROSER3Q2NL68 480 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms