RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 BRIP1Q9BX63 1249 aa29.47■■■□□ 2.31
PTP4A1-203ENST00000473334 LAS1LQ9Y4W2 734 aaKnown RBP29.47■■■□□ 2.31
PTP4A1-203ENST00000473334 NPHP1O15259 732 aa29.46■■■□□ 2.31
PTP4A1-203ENST00000473334 ATP10DQ9P241 1426 aa29.45■■■□□ 2.31
PTP4A1-203ENST00000473334 H0YIN7 160 aa29.45■■■□□ 2.31
PTP4A1-203ENST00000473334 ST5P78524 1137 aa29.45■■■□□ 2.31
PTP4A1-203ENST00000473334 PDZRN3Q9UPQ7 1066 aa29.45■■■□□ 2.31
PTP4A1-203ENST00000473334 NUP98P52948 1817 aa29.45■■■□□ 2.3
PTP4A1-203ENST00000473334 COL11A2P13942 1736 aaPredicted RBP29.45■■■□□ 2.3
PTP4A1-203ENST00000473334 ERVV-1B6SEH8 477 aa29.44■■■□□ 2.3
PTP4A1-203ENST00000473334 EIF2S2P20042 333 aaKnown RBP29.44■■■□□ 2.3
PTP4A1-203ENST00000473334 PDE6BP35913 854 aa29.44■■■□□ 2.3
PTP4A1-203ENST00000473334 HLFQ16534 295 aa29.44■■■□□ 2.3
PTP4A1-203ENST00000473334 KIF6Q6ZMV9 814 aa29.44■■■□□ 2.3
PTP4A1-203ENST00000473334 CCDC24Q8N4L8 307 aa29.44■■■□□ 2.3
PTP4A1-203ENST00000473334 NIP7Q9Y221 180 aaKnown RBP eCLIP29.44■■■□□ 2.3
PTP4A1-203ENST00000473334 MAP3K15Q6ZN16 1313 aa29.44■■■□□ 2.3
PTP4A1-203ENST00000473334 NBPF5PQ86XG9 351 aaPredicted RBP29.43■■■□□ 2.3
PTP4A1-203ENST00000473334 TTLL7Q6ZT98 887 aa29.42■■■□□ 2.3
PTP4A1-203ENST00000473334 CFAP44Q96MT7 982 aa29.42■■■□□ 2.3
PTP4A1-203ENST00000473334 TTLL6Q8N841 843 aa29.41■■■□□ 2.3
PTP4A1-203ENST00000473334 PDIA6Q15084 440 aa29.4■■■□□ 2.3
PTP4A1-203ENST00000473334 CALD1Q05682 793 aaKnown RBP29.39■■■□□ 2.3
PTP4A1-203ENST00000473334 KRT24Q2M2I5 525 aa29.39■■■□□ 2.3
PTP4A1-203ENST00000473334 LRP10Q7Z4F1 713 aa29.39■■■□□ 2.3
PTP4A1-203ENST00000473334 MRS2Q9HD23 443 aa29.39■■■□□ 2.3
PTP4A1-203ENST00000473334 TPTE2Q6XPS3 522 aa29.37■■■□□ 2.29
PTP4A1-203ENST00000473334 ZNF622Q969S3 477 aaKnown RBP eCLIP29.37■■■□□ 2.29
PTP4A1-203ENST00000473334 ZBTB3Q9H5J0 574 aa29.37■■■□□ 2.29
PTP4A1-203ENST00000473334 HOXB7P09629 217 aa29.36■■■□□ 2.29
PTP4A1-203ENST00000473334 ZNF853P0CG23 659 aa29.36■■■□□ 2.29
PTP4A1-203ENST00000473334 PROSER3Q2NL68 480 aa29.36■■■□□ 2.29
PTP4A1-203ENST00000473334 NECTIN2Q92692 538 aa29.36■■■□□ 2.29
PTP4A1-203ENST00000473334 MBIPQ9NS73 344 aa29.36■■■□□ 2.29
PTP4A1-203ENST00000473334 IFT57Q9NWB7 429 aa29.36■■■□□ 2.29
PTP4A1-203ENST00000473334 FAM177BA6PVY3 158 aa29.35■■■□□ 2.29
PTP4A1-203ENST00000473334 ANXA1P04083 346 aa29.35■■■□□ 2.29
PTP4A1-203ENST00000473334 ARFGEF2Q9Y6D5 1785 aa29.34■■■□□ 2.29
PTP4A1-203ENST00000473334 SBF1O95248 1867 aa29.34■■■□□ 2.29
PTP4A1-203ENST00000473334 CACNA1SQ13698 1873 aa29.34■■■□□ 2.29
PTP4A1-203ENST00000473334 SRGNP10124 158 aa29.33■■■□□ 2.29
PTP4A1-203ENST00000473334 GNAI1P63096 354 aa29.33■■■□□ 2.29
PTP4A1-203ENST00000473334 GIGYF2Q6Y7W6 1299 aaKnown RBP29.33■■■□□ 2.29
PTP4A1-203ENST00000473334 NYXQ9GZU5 481 aa29.33■■■□□ 2.29
PTP4A1-203ENST00000473334 GPBP1L1Q9HC44 474 aaPredicted RBP29.33■■■□□ 2.29
PTP4A1-203ENST00000473334 DDX21Q9NR30 783 aaKnown RBP eCLIP29.33■■■□□ 2.29
PTP4A1-203ENST00000473334 HDGFL1Q5TGJ6 251 aa29.32■■■□□ 2.28
PTP4A1-203ENST00000473334 C9orf131Q5VYM1 1079 aa29.32■■■□□ 2.28
PTP4A1-203ENST00000473334 STYK1Q6J9G0 422 aa29.32■■■□□ 2.28
PTP4A1-203ENST00000473334 IBTKQ9P2D0 1353 aaPredicted RBP29.31■■■□□ 2.28
PTP4A1-203ENST00000473334 ZNF526Q8TF50 670 aaPredicted RBP29.31■■■□□ 2.28
PTP4A1-203ENST00000473334 MASTLQ96GX5 879 aa29.31■■■□□ 2.28
PTP4A1-203ENST00000473334 UBN2Q6ZU65 1347 aa29.3■■■□□ 2.28
PTP4A1-203ENST00000473334 GPTP24298 496 aa29.3■■■□□ 2.28
PTP4A1-203ENST00000473334 GTF2E1P29083 439 aaPredicted RBP29.3■■■□□ 2.28
PTP4A1-203ENST00000473334 CNKSR1Q969H4 720 aa29.3■■■□□ 2.28
PTP4A1-203ENST00000473334 ANKRD36CQ5JPF3 1778 aa29.29■■■□□ 2.28
PTP4A1-203ENST00000473334 DUSP27Q5VZP5 1158 aa29.29■■■□□ 2.28
PTP4A1-203ENST00000473334 COPS6Q7L5N1 327 aa29.29■■■□□ 2.28
PTP4A1-203ENST00000473334 ZNF34Q8IZ26 560 aa29.29■■■□□ 2.28
PTP4A1-203ENST00000473334 CHPF2Q9P2E5 772 aa29.29■■■□□ 2.28
PTP4A1-203ENST00000473334 TNRC6CQ9HCJ0 1690 aaKnown RBP29.28■■■□□ 2.28
PTP4A1-203ENST00000473334 KLRG2A4D1S0 409 aaPredicted RBP29.28■■■□□ 2.28
PTP4A1-203ENST00000473334 RASSF7Q02833 373 aa29.28■■■□□ 2.28
PTP4A1-203ENST00000473334 CCDC27Q2M243 656 aa29.28■■■□□ 2.28
PTP4A1-203ENST00000473334 XAGE3Q8WTP9 111 aa29.28■■■□□ 2.28
PTP4A1-203ENST00000473334 RNF181Q9P0P0 153 aa29.28■■■□□ 2.28
PTP4A1-203ENST00000473334 SLX4Q8IY92 1834 aa29.28■■■□□ 2.28
PTP4A1-203ENST00000473334 AIMP1Q12904 312 aaKnown RBP29.27■■■□□ 2.28
PTP4A1-203ENST00000473334 ABCC12Q96J65 1359 aa29.26■■■□□ 2.28
PTP4A1-203ENST00000473334 NPR1P16066 1061 aa29.26■■■□□ 2.27
PTP4A1-203ENST00000473334 NUTM1Q86Y26 1132 aa29.26■■■□□ 2.27
PTP4A1-203ENST00000473334 DBF4Q9UBU7 674 aaPredicted RBP29.26■■■□□ 2.27
PTP4A1-203ENST00000473334 FER1L6Q2WGJ9 1857 aa29.25■■■□□ 2.27
PTP4A1-203ENST00000473334 C21orf2O43822 256 aa29.25■■■□□ 2.27
PTP4A1-203ENST00000473334 C1QTNF8P60827 252 aa29.25■■■□□ 2.27
PTP4A1-203ENST00000473334 PARP10Q53GL7 1025 aa29.25■■■□□ 2.27
PTP4A1-203ENST00000473334 SUSD4Q5VX71 490 aa29.25■■■□□ 2.27
PTP4A1-203ENST00000473334 PRPF40BQ6NWY9 871 aaKnown RBP29.25■■■□□ 2.27
PTP4A1-203ENST00000473334 RIC1Q4ADV7 1423 aa29.25■■■□□ 2.27
PTP4A1-203ENST00000473334 ERFEQ4G0M1 354 aa29.24■■■□□ 2.27
PTP4A1-203ENST00000473334 ZNF219Q9P2Y4 722 aaPredicted RBP29.24■■■□□ 2.27
PTP4A1-203ENST00000473334 CCDC88AQ3V6T2 1871 aa29.23■■■□□ 2.27
PTP4A1-203ENST00000473334 SENP3-EIF4A1A0A087X0R7 540 aa29.23■■■□□ 2.27
PTP4A1-203ENST00000473334 NFKBIEO00221 500 aa29.23■■■□□ 2.27
PTP4A1-203ENST00000473334 NTSR2O95665 410 aa29.23■■■□□ 2.27
PTP4A1-203ENST00000473334 NCBP3Q53F19 620 aaKnown RBP29.23■■■□□ 2.27
PTP4A1-203ENST00000473334 HSP90AB3PQ58FF7 597 aa29.23■■■□□ 2.27
PTP4A1-203ENST00000473334 PPP1R42Q7Z4L9 355 aa29.23■■■□□ 2.27
PTP4A1-203ENST00000473334 LMNB1P20700 586 aa29.22■■■□□ 2.27
PTP4A1-203ENST00000473334 WWC1Q8IX03 1113 aa29.22■■■□□ 2.27
PTP4A1-203ENST00000473334 HYPKQ9NX55 129 aa29.21■■■□□ 2.27
PTP4A1-203ENST00000473334 SOGA3Q5TF21 947 aa29.2■■■□□ 2.26
PTP4A1-203ENST00000473334 TIAM2Q8IVF5 1701 aa29.2■■■□□ 2.26
PTP4A1-203ENST00000473334 ELL2O00472 640 aaPredicted RBP29.19■■■□□ 2.26
PTP4A1-203ENST00000473334 PRELPP51888 382 aa29.19■■■□□ 2.26
PTP4A1-203ENST00000473334 CRY2Q49AN0 593 aa29.19■■■□□ 2.26
PTP4A1-203ENST00000473334 ZC3H4Q9UPT8 1303 aaKnown RBP29.19■■■□□ 2.26
PTP4A1-203ENST00000473334 TCIRG1Q13488 830 aa29.18■■■□□ 2.26
PTP4A1-203ENST00000473334 C8orf58Q8NAV2 365 aa29.18■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms