RNA–Protein interactions for RNA: ENST00000472610.5

COMMD3-210, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-210ENST00000472610 BRIP1Q9BX63 1249 aa22.23■■□□□ 1.15
COMMD3-210ENST00000472610 H0YIN7 160 aa22.22■■□□□ 1.15
COMMD3-210ENST00000472610 PDE6BP35913 854 aa22.22■■□□□ 1.15
COMMD3-210ENST00000472610 KIF6Q6ZMV9 814 aa22.22■■□□□ 1.15
COMMD3-210ENST00000472610 CNBD1Q8NA66 436 aa22.22■■□□□ 1.15
COMMD3-210ENST00000472610 UTRNP46939 3433 aa22.21■■□□□ 1.15
COMMD3-210ENST00000472610 DLEC1Q9Y238 1755 aa22.21■■□□□ 1.15
COMMD3-210ENST00000472610 ST5P78524 1137 aa22.21■■□□□ 1.15
COMMD3-210ENST00000472610 NIP7Q9Y221 180 aaKnown RBP eCLIP22.21■■□□□ 1.15
COMMD3-210ENST00000472610 MAP3K15Q6ZN16 1313 aa22.21■■□□□ 1.15
COMMD3-210ENST00000472610 GOLGB1Q14789 3259 aaKnown RBP22.2■■□□□ 1.14
COMMD3-210ENST00000472610 GNAI1P63096 354 aa22.2■■□□□ 1.14
COMMD3-210ENST00000472610 ARHGAP27Q6ZUM4 889 aa22.2■■□□□ 1.14
COMMD3-210ENST00000472610 NBPF5PQ86XG9 351 aaPredicted RBP22.2■■□□□ 1.14
COMMD3-210ENST00000472610 C2CD5Q86YS7 1000 aa22.2■■□□□ 1.14
COMMD3-210ENST00000472610 NUP98P52948 1817 aa22.2■■□□□ 1.14
COMMD3-210ENST00000472610 HOXB7P09629 217 aa22.19■■□□□ 1.14
COMMD3-210ENST00000472610 ZNF853P0CG23 659 aa22.19■■□□□ 1.14
COMMD3-210ENST00000472610 HLFQ16534 295 aa22.19■■□□□ 1.14
COMMD3-210ENST00000472610 TPTE2Q6XPS3 522 aa22.19■■□□□ 1.14
COMMD3-210ENST00000472610 IFT57Q9NWB7 429 aa22.19■■□□□ 1.14
COMMD3-210ENST00000472610 ANKRD31Q8N7Z5 1873 aa22.19■■□□□ 1.14
COMMD3-210ENST00000472610 PDIA6Q15084 440 aa22.18■■□□□ 1.14
COMMD3-210ENST00000472610 TTLL7Q6ZT98 887 aa22.18■■□□□ 1.14
COMMD3-210ENST00000472610 TTLL6Q8N841 843 aa22.18■■□□□ 1.14
COMMD3-210ENST00000472610 NCBP3Q53F19 620 aaKnown RBP22.17■■□□□ 1.14
COMMD3-210ENST00000472610 MBIPQ9NS73 344 aa22.17■■□□□ 1.14
COMMD3-210ENST00000472610 CCDC27Q2M243 656 aa22.16■■□□□ 1.14
COMMD3-210ENST00000472610 CCDC24Q8N4L8 307 aa22.16■■□□□ 1.14
COMMD3-210ENST00000472610 DDX21Q9NR30 783 aaKnown RBP eCLIP22.16■■□□□ 1.14
COMMD3-210ENST00000472610 KRT24Q2M2I5 525 aa22.15■■□□□ 1.14
COMMD3-210ENST00000472610 GIGYF2Q6Y7W6 1299 aaKnown RBP22.15■■□□□ 1.14
COMMD3-210ENST00000472610 LRP10Q7Z4F1 713 aa22.15■■□□□ 1.14
COMMD3-210ENST00000472610 NECTIN2Q92692 538 aa22.15■■□□□ 1.14
COMMD3-210ENST00000472610 NYXQ9GZU5 481 aa22.15■■□□□ 1.14
COMMD3-210ENST00000472610 ZBTB3Q9H5J0 574 aa22.15■■□□□ 1.14
COMMD3-210ENST00000472610 ATP10DQ9P241 1426 aa22.14■■□□□ 1.14
COMMD3-210ENST00000472610 GTF2E1P29083 439 aaPredicted RBP22.13■■□□□ 1.13
COMMD3-210ENST00000472610 HDGFL1Q5TGJ6 251 aa22.13■■□□□ 1.13
COMMD3-210ENST00000472610 DUSP27Q5VZP5 1158 aa22.13■■□□□ 1.13
COMMD3-210ENST00000472610 ZNF622Q969S3 477 aaKnown RBP eCLIP22.13■■□□□ 1.13
COMMD3-210ENST00000472610 ADCY9O60503 1353 aa22.12■■□□□ 1.13
COMMD3-210ENST00000472610 FAM177BA6PVY3 158 aa22.12■■□□□ 1.13
COMMD3-210ENST00000472610 ANXA1P04083 346 aa22.12■■□□□ 1.13
COMMD3-210ENST00000472610 PROSER3Q2NL68 480 aa22.12■■□□□ 1.13
COMMD3-210ENST00000472610 STYK1Q6J9G0 422 aa22.12■■□□□ 1.13
COMMD3-210ENST00000472610 DBF4Q9UBU7 674 aaPredicted RBP22.12■■□□□ 1.13
COMMD3-210ENST00000472610 SRGNP10124 158 aa22.11■■□□□ 1.13
COMMD3-210ENST00000472610 COPS6Q7L5N1 327 aa22.11■■□□□ 1.13
COMMD3-210ENST00000472610 WWC1Q8IX03 1113 aa22.11■■□□□ 1.13
COMMD3-210ENST00000472610 ZNF34Q8IZ26 560 aa22.11■■□□□ 1.13
COMMD3-210ENST00000472610 CNKSR1Q969H4 720 aa22.11■■□□□ 1.13
COMMD3-210ENST00000472610 MASTLQ96GX5 879 aa22.11■■□□□ 1.13
COMMD3-210ENST00000472610 CHMP4AQ9BY43 222 aa22.11■■□□□ 1.13
COMMD3-210ENST00000472610 COL11A2P13942 1736 aaPredicted RBP22.1■■□□□ 1.13
COMMD3-210ENST00000472610 PARP10Q53GL7 1025 aa22.1■■□□□ 1.13
COMMD3-210ENST00000472610 XAGE3Q8WTP9 111 aa22.1■■□□□ 1.13
COMMD3-210ENST00000472610 CHPF2Q9P2E5 772 aa22.1■■□□□ 1.13
COMMD3-210ENST00000472610 IBTKQ9P2D0 1353 aaPredicted RBP22.1■■□□□ 1.13
COMMD3-210ENST00000472610 KLRG2A4D1S0 409 aaPredicted RBP22.09■■□□□ 1.13
COMMD3-210ENST00000472610 GPTP24298 496 aa22.09■■□□□ 1.13
COMMD3-210ENST00000472610 AIMP1Q12904 312 aaKnown RBP22.09■■□□□ 1.13
COMMD3-210ENST00000472610 HSP90AB3PQ58FF7 597 aa22.09■■□□□ 1.13
COMMD3-210ENST00000472610 PPP1R42Q7Z4L9 355 aa22.08■■□□□ 1.13
COMMD3-210ENST00000472610 HYPKQ9NX55 129 aa22.08■■□□□ 1.13
COMMD3-210ENST00000472610 IL16Q14005 1332 aa22.07■■□□□ 1.12
COMMD3-210ENST00000472610 NPR1P16066 1061 aa22.07■■□□□ 1.12
COMMD3-210ENST00000472610 SUSD4Q5VX71 490 aa22.07■■□□□ 1.12
COMMD3-210ENST00000472610 UBN2Q6ZU65 1347 aa22.06■■□□□ 1.12
COMMD3-210ENST00000472610 C9orf131Q5VYM1 1079 aa22.06■■□□□ 1.12
COMMD3-210ENST00000472610 FAM9BQ8IZU0 186 aa22.06■■□□□ 1.12
COMMD3-210ENST00000472610 GPBP1L1Q9HC44 474 aaPredicted RBP22.06■■□□□ 1.12
COMMD3-210ENST00000472610 SBF1O95248 1867 aa22.06■■□□□ 1.12
COMMD3-210ENST00000472610 ANKRD36CQ5JPF3 1778 aa22.05■■□□□ 1.12
COMMD3-210ENST00000472610 ARFGEF2Q9Y6D5 1785 aa22.05■■□□□ 1.12
COMMD3-210ENST00000472610 ELL2O00472 640 aaPredicted RBP22.05■■□□□ 1.12
COMMD3-210ENST00000472610 PLBD2Q8NHP8 589 aa22.05■■□□□ 1.12
COMMD3-210ENST00000472610 C21orf2O43822 256 aa22.04■■□□□ 1.12
COMMD3-210ENST00000472610 TCIRG1Q13488 830 aa22.04■■□□□ 1.12
COMMD3-210ENST00000472610 ERFEQ4G0M1 354 aa22.04■■□□□ 1.12
COMMD3-210ENST00000472610 SOGA3Q5TF21 947 aa22.04■■□□□ 1.12
COMMD3-210ENST00000472610 ANKRD13DQ6ZTN6 518 aa22.04■■□□□ 1.12
COMMD3-210ENST00000472610 NUTM1Q86Y26 1132 aa22.04■■□□□ 1.12
COMMD3-210ENST00000472610 C8orf58Q8NAV2 365 aa22.04■■□□□ 1.12
COMMD3-210ENST00000472610 CACNA1SQ13698 1873 aa22.04■■□□□ 1.12
COMMD3-210ENST00000472610 RIC1Q4ADV7 1423 aa22.04■■□□□ 1.12
COMMD3-210ENST00000472610 SENP3-EIF4A1A0A087X0R7 540 aa22.03■■□□□ 1.12
COMMD3-210ENST00000472610 NTSR2O95665 410 aa22.03■■□□□ 1.12
COMMD3-210ENST00000472610 ALDH1B1P30837 517 aa22.03■■□□□ 1.12
COMMD3-210ENST00000472610 PRPF40BQ6NWY9 871 aaKnown RBP22.03■■□□□ 1.12
COMMD3-210ENST00000472610 WDR63Q8IWG1 891 aa22.03■■□□□ 1.12
COMMD3-210ENST00000472610 UTP14AQ9BVJ6 771 aaKnown RBP22.03■■□□□ 1.12
COMMD3-210ENST00000472610 RNF181Q9P0P0 153 aa22.03■■□□□ 1.12
COMMD3-210ENST00000472610 SLX4Q8IY92 1834 aa22.03■■□□□ 1.12
COMMD3-210ENST00000472610 RNF123Q5XPI4 1314 aa22.03■■□□□ 1.12
COMMD3-210ENST00000472610 LMNB1P20700 586 aa22.02■■□□□ 1.12
COMMD3-210ENST00000472610 CCDC30Q5VVM6 783 aa22.02■■□□□ 1.12
COMMD3-210ENST00000472610 ZNF526Q8TF50 670 aaPredicted RBP22.02■■□□□ 1.12
COMMD3-210ENST00000472610 CRY2Q49AN0 593 aa22.01■■□□□ 1.11
COMMD3-210ENST00000472610 TSR2Q969E8 191 aaKnown RBP22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms