RNA–Protein interactions for RNA: ENST00000468861.5

FXR1-207, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2 BASIC

Gene FXR1, Length 1,989 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-207ENST00000468861 CLIP2Q9UDT6 1046 aa13.07□□□□□ -0.32
FXR1-207ENST00000468861 RRP15Q9Y3B9 282 aaKnown RBP13.07□□□□□ -0.32
FXR1-207ENST00000468861 CEP83Q9Y592 693 aa13.07□□□□□ -0.32
FXR1-207ENST00000468861 QRICH2Q9H0J4 1663 aa13.07□□□□□ -0.32
FXR1-207ENST00000468861 CCDC172P0C7W6 258 aa13.07□□□□□ -0.32
FXR1-207ENST00000468861 CCDC91Q7Z6B0 441 aa13.07□□□□□ -0.32
FXR1-207ENST00000468861 LRRC8AQ8IWT6 810 aa13.07□□□□□ -0.32
FXR1-207ENST00000468861 SUGP1Q8IWZ8 645 aaKnown RBP13.07□□□□□ -0.32
FXR1-207ENST00000468861 ANKRD44Q8N8A2 993 aa13.07□□□□□ -0.32
FXR1-207ENST00000468861 MNS1Q8NEH6 495 aa13.07□□□□□ -0.32
FXR1-207ENST00000468861 CACTINQ8WUQ7 758 aaKnown RBP13.07□□□□□ -0.32
FXR1-207ENST00000468861 MRFAP1L1Q96HT8 127 aa13.07□□□□□ -0.32
FXR1-207ENST00000468861 SRRTQ9BXP5 876 aaKnown RBP13.07□□□□□ -0.32
FXR1-207ENST00000468861 DEF6Q9H4E7 631 aa13.07□□□□□ -0.32
FXR1-207ENST00000468861 C1orf115Q9H7X2 142 aa13.07□□□□□ -0.32
FXR1-207ENST00000468861 SLC52A1Q9NWF4 448 aa13.07□□□□□ -0.32
FXR1-207ENST00000468861 MRVI1Q9Y6F6 885 aa13.07□□□□□ -0.32
FXR1-207ENST00000468861 ATP10DQ9P241 1426 aa13.07□□□□□ -0.32
FXR1-207ENST00000468861 STX6O43752 255 aa13.06□□□□□ -0.32
FXR1-207ENST00000468861 KCNJ6P48051 423 aa13.06□□□□□ -0.32
FXR1-207ENST00000468861 SWT1Q5T5J6 900 aaKnown RBP13.06□□□□□ -0.32
FXR1-207ENST00000468861 RBM43Q6ZSC3 357 aaKnown RBP13.06□□□□□ -0.32
FXR1-207ENST00000468861 NUP62CLQ9H1M0 184 aa13.06□□□□□ -0.32
FXR1-207ENST00000468861 TET3O43151 1660 aa13.06□□□□□ -0.32
FXR1-207ENST00000468861 CARMIL2Q6F5E8 1435 aa13.05□□□□□ -0.32
FXR1-207ENST00000468861 ATP2B1P20020 1258 aa13.05□□□□□ -0.32
FXR1-207ENST00000468861 SRPK2P78362 688 aaKnown RBP13.05□□□□□ -0.32
FXR1-207ENST00000468861 NRXN1Q9ULB1 1477 aa13.05□□□□□ -0.32
FXR1-207ENST00000468861 LMOD2Q6P5Q4 547 aa13.05□□□□□ -0.32
FXR1-207ENST00000468861 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.05□□□□□ -0.32
FXR1-207ENST00000468861 RPAINQ86UA6 219 aa13.05□□□□□ -0.32
FXR1-207ENST00000468861 GLI2P10070 1586 aa13.04□□□□□ -0.32
FXR1-207ENST00000468861 RPS6KA5O75582 802 aa13.04□□□□□ -0.32
FXR1-207ENST00000468861 CCDC93Q567U6 631 aa13.04□□□□□ -0.32
FXR1-207ENST00000468861 CCAR2Q8N163 923 aaKnown RBP13.04□□□□□ -0.32
FXR1-207ENST00000468861 SMARCE1Q969G3 411 aa13.04□□□□□ -0.32
FXR1-207ENST00000468861 ESYT1Q9BSJ8 1104 aa13.04□□□□□ -0.32
FXR1-207ENST00000468861 CBX8Q9HC52 389 aa13.04□□□□□ -0.32
FXR1-207ENST00000468861 DDX19AQ9NUU7 478 aaKnown RBP13.04□□□□□ -0.32
FXR1-207ENST00000468861 CCDC61Q9Y6R9 512 aa13.04□□□□□ -0.32
FXR1-207ENST00000468861 ARHGEF40Q8TER5 1519 aa13.04□□□□□ -0.32
FXR1-207ENST00000468861 FIBPO43427 364 aa13.03□□□□□ -0.32
FXR1-207ENST00000468861 GSDMDP57764 484 aa13.03□□□□□ -0.32
FXR1-207ENST00000468861 PPM1EQ8WY54 764 aa13.03□□□□□ -0.32
FXR1-207ENST00000468861 ATP10BO94823 1461 aa13.03□□□□□ -0.32
FXR1-207ENST00000468861 DEPDC5O75140 1603 aa13.03□□□□□ -0.32
FXR1-207ENST00000468861 ACTN2P35609 894 aa13.03□□□□□ -0.32
FXR1-207ENST00000468861 LUZP1Q86V48 1076 aa13.03□□□□□ -0.32
FXR1-207ENST00000468861 ZNF579Q8NAF0 562 aaKnown RBP13.03□□□□□ -0.32
FXR1-207ENST00000468861 DONSONQ9NYP3 566 aa13.03□□□□□ -0.32
FXR1-207ENST00000468861 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.03□□□□□ -0.32
FXR1-207ENST00000468861 NRBP1Q9UHY1 535 aa13.03□□□□□ -0.32
FXR1-207ENST00000468861 TTC21BQ7Z4L5 1316 aa13.03□□□□□ -0.32
FXR1-207ENST00000468861 TRIM66O15016 1216 aa13.02□□□□□ -0.32
FXR1-207ENST00000468861 CCP110O43303 1012 aa13.02□□□□□ -0.32
FXR1-207ENST00000468861 CCDC158Q5M9N0 1113 aa13.02□□□□□ -0.32
FXR1-207ENST00000468861 LEKR1Q6ZMV7 388 aa13.02□□□□□ -0.32
FXR1-207ENST00000468861 BANK1Q8NDB2 785 aa13.02□□□□□ -0.32
FXR1-207ENST00000468861 ZBTB9Q96C00 473 aa13.02□□□□□ -0.32
FXR1-207ENST00000468861 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.02□□□□□ -0.324e-17■□□□□ 10.7
FXR1-207ENST00000468861 PSDA5PKW4 1024 aaPredicted RBP13.01□□□□□ -0.33
FXR1-207ENST00000468861 CPP00450 1065 aa13.01□□□□□ -0.33
FXR1-207ENST00000468861 SKILP12757 684 aa13.01□□□□□ -0.33
FXR1-207ENST00000468861 SYT1P21579 422 aa13.01□□□□□ -0.33
FXR1-207ENST00000468861 GSCP56915 257 aaPredicted RBP13.01□□□□□ -0.33
FXR1-207ENST00000468861 TMEM132AQ24JP5 1023 aa13.01□□□□□ -0.33
FXR1-207ENST00000468861 ERCC6LQ2NKX8 1250 aa13.01□□□□□ -0.33
FXR1-207ENST00000468861 ARHGAP29Q52LW3 1261 aa13.01□□□□□ -0.33
FXR1-207ENST00000468861 ORC3Q9UBD5 711 aaPredicted RBP13.01□□□□□ -0.33
FXR1-207ENST00000468861 PLCH2O75038 1416 aa13.01□□□□□ -0.33
FXR1-207ENST00000468861 ADGRL3Q9HAR2 1447 aa13.01□□□□□ -0.33
FXR1-207ENST00000468861 VAMP4O75379 141 aa13.01□□□□□ -0.33
FXR1-207ENST00000468861 OAS2P29728 719 aaKnown RBP13.01□□□□□ -0.33
FXR1-207ENST00000468861 SNW1Q13573 536 aaKnown RBP13.01□□□□□ -0.33
FXR1-207ENST00000468861 FOXD4L6Q3SYB3 417 aaPredicted RBP13.01□□□□□ -0.33
FXR1-207ENST00000468861 ANO6Q4KMQ2 910 aa13.01□□□□□ -0.33
FXR1-207ENST00000468861 FOXD4L3Q6VB84 417 aaPredicted RBP13.01□□□□□ -0.33
FXR1-207ENST00000468861 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.01□□□□□ -0.33
FXR1-207ENST00000468861 UBXN4Q92575 508 aa13.01□□□□□ -0.33
FXR1-207ENST00000468861 CEP89Q96ST8 783 aa13.01□□□□□ -0.33
FXR1-207ENST00000468861 TNMDQ9H2S6 317 aa13.01□□□□□ -0.33
FXR1-207ENST00000468861 KIF1BO60333 1816 aa13□□□□□ -0.33
FXR1-207ENST00000468861 EFCAB6Q5THR3 1501 aa13□□□□□ -0.33
FXR1-207ENST00000468861 PHLPP2Q6ZVD8 1323 aa13□□□□□ -0.33
FXR1-207ENST00000468861 CASTP20810 708 aaKnown RBP13□□□□□ -0.33
FXR1-207ENST00000468861 CCZ1BP86790 482 aa13□□□□□ -0.33
FXR1-207ENST00000468861 CCZ1P86791 482 aaPredicted RBP13□□□□□ -0.33
FXR1-207ENST00000468861 CARD10Q9BWT7 1032 aa13□□□□□ -0.33
FXR1-207ENST00000468861 MED4Q9NPJ6 270 aa13□□□□□ -0.33
FXR1-207ENST00000468861 MKRN1Q9UHC7 482 aaKnown RBP13□□□□□ -0.33
FXR1-207ENST00000468861 LCMT1Q9UIC8 334 aa13□□□□□ -0.33
FXR1-207ENST00000468861 SMC3Q9UQE7 1217 aa13□□□□□ -0.33
FXR1-207ENST00000468861 ADGRB1O14514 1584 aa13□□□□□ -0.33
FXR1-207ENST00000468861 VWDEQ8N2E2 1590 aa13□□□□□ -0.33
FXR1-207ENST00000468861 EFCAB8A8MWE9 144 aa13□□□□□ -0.33
FXR1-207ENST00000468861 POLR3GO15318 223 aaPredicted RBP13□□□□□ -0.33
FXR1-207ENST00000468861 CCDC144BQ3MJ40 725 aa13□□□□□ -0.33
FXR1-207ENST00000468861 CCDC144CPQ8IYA2 1237 aa13□□□□□ -0.33
FXR1-207ENST00000468861 C16orf71Q8IYS4 520 aaPredicted RBP13□□□□□ -0.33
FXR1-207ENST00000468861 MSL3Q8N5Y2 521 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms