RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 ADCY9O60503 1353 aa22.37■■□□□ 1.17
SSBP1-207ENST00000468267 APAF1O14727 1248 aa22.36■■□□□ 1.17
SSBP1-207ENST00000468267 CCDC24Q8N4L8 307 aa22.36■■□□□ 1.17
SSBP1-207ENST00000468267 CNBD1Q8NA66 436 aa22.36■■□□□ 1.17
SSBP1-207ENST00000468267 PDZRN3Q9UPQ7 1066 aa22.36■■□□□ 1.17
SSBP1-207ENST00000468267 NUP98P52948 1817 aa22.36■■□□□ 1.17
SSBP1-207ENST00000468267 ATP10DQ9P241 1426 aa22.35■■□□□ 1.17
SSBP1-207ENST00000468267 ERVV-1B6SEH8 477 aa22.35■■□□□ 1.17
SSBP1-207ENST00000468267 MYL6BP14649 208 aa22.35■■□□□ 1.17
SSBP1-207ENST00000468267 PDE6BP35913 854 aa22.35■■□□□ 1.17
SSBP1-207ENST00000468267 HLFQ16534 295 aa22.35■■□□□ 1.17
SSBP1-207ENST00000468267 LAS1LQ9Y4W2 734 aaKnown RBP22.35■■□□□ 1.17
SSBP1-207ENST00000468267 EIF2S2P20042 333 aaKnown RBP22.34■■□□□ 1.17
SSBP1-207ENST00000468267 TTLL7Q6ZT98 887 aa22.34■■□□□ 1.17
SSBP1-207ENST00000468267 NBPF5PQ86XG9 351 aaPredicted RBP22.34■■□□□ 1.17
SSBP1-207ENST00000468267 TTLL6Q8N841 843 aa22.34■■□□□ 1.17
SSBP1-207ENST00000468267 NIP7Q9Y221 180 aaKnown RBP eCLIP22.34■■□□□ 1.17
SSBP1-207ENST00000468267 MAP3K15Q6ZN16 1313 aa22.33■■□□□ 1.17
SSBP1-207ENST00000468267 NPHP1O15259 732 aa22.33■■□□□ 1.17
SSBP1-207ENST00000468267 ANP32CO43423 234 aa22.33■■□□□ 1.17
SSBP1-207ENST00000468267 ST5P78524 1137 aa22.33■■□□□ 1.17
SSBP1-207ENST00000468267 KIF6Q6ZMV9 814 aa22.33■■□□□ 1.17
SSBP1-207ENST00000468267 PDIA6Q15084 440 aa22.32■■□□□ 1.16
SSBP1-207ENST00000468267 CFAP44Q96MT7 982 aa22.32■■□□□ 1.16
SSBP1-207ENST00000468267 TPTE2Q6XPS3 522 aa22.31■■□□□ 1.16
SSBP1-207ENST00000468267 LRP10Q7Z4F1 713 aa22.31■■□□□ 1.16
SSBP1-207ENST00000468267 SBF1O95248 1867 aa22.3■■□□□ 1.16
SSBP1-207ENST00000468267 KRT24Q2M2I5 525 aa22.3■■□□□ 1.16
SSBP1-207ENST00000468267 ZNF622Q969S3 477 aaKnown RBP eCLIP22.3■■□□□ 1.16
SSBP1-207ENST00000468267 COL11A2P13942 1736 aaPredicted RBP22.3■■□□□ 1.16
SSBP1-207ENST00000468267 ZNF853P0CG23 659 aa22.29■■□□□ 1.16
SSBP1-207ENST00000468267 PROSER3Q2NL68 480 aa22.29■■□□□ 1.16
SSBP1-207ENST00000468267 ZBTB3Q9H5J0 574 aa22.28■■□□□ 1.16
SSBP1-207ENST00000468267 FAM177BA6PVY3 158 aa22.27■■□□□ 1.16
SSBP1-207ENST00000468267 ANXA1P04083 346 aa22.27■■□□□ 1.16
SSBP1-207ENST00000468267 SRGNP10124 158 aa22.27■■□□□ 1.16
SSBP1-207ENST00000468267 CALD1Q05682 793 aaKnown RBP22.27■■□□□ 1.16
SSBP1-207ENST00000468267 C9orf131Q5VYM1 1079 aa22.27■■□□□ 1.16
SSBP1-207ENST00000468267 NECTIN2Q92692 538 aa22.27■■□□□ 1.16
SSBP1-207ENST00000468267 GPBP1L1Q9HC44 474 aaPredicted RBP22.27■■□□□ 1.16
SSBP1-207ENST00000468267 MRS2Q9HD23 443 aa22.27■■□□□ 1.16
SSBP1-207ENST00000468267 MBIPQ9NS73 344 aa22.27■■□□□ 1.16
SSBP1-207ENST00000468267 KLRG2A4D1S0 409 aaPredicted RBP22.26■■□□□ 1.15
SSBP1-207ENST00000468267 HOXB7P09629 217 aa22.26■■□□□ 1.15
SSBP1-207ENST00000468267 STYK1Q6J9G0 422 aa22.26■■□□□ 1.15
SSBP1-207ENST00000468267 GIGYF2Q6Y7W6 1299 aaKnown RBP22.26■■□□□ 1.15
SSBP1-207ENST00000468267 ZNF526Q8TF50 670 aaPredicted RBP22.26■■□□□ 1.15
SSBP1-207ENST00000468267 IFT57Q9NWB7 429 aa22.26■■□□□ 1.15
SSBP1-207ENST00000468267 GNAI1P63096 354 aa22.25■■□□□ 1.15
SSBP1-207ENST00000468267 ZNF34Q8IZ26 560 aa22.25■■□□□ 1.15
SSBP1-207ENST00000468267 MASTLQ96GX5 879 aa22.25■■□□□ 1.15
SSBP1-207ENST00000468267 NYXQ9GZU5 481 aa22.25■■□□□ 1.15
SSBP1-207ENST00000468267 DDX21Q9NR30 783 aaKnown RBP eCLIP22.25■■□□□ 1.15
SSBP1-207ENST00000468267 SLX4Q8IY92 1834 aa22.24■■□□□ 1.15
SSBP1-207ENST00000468267 CNKSR1Q969H4 720 aa22.24■■□□□ 1.15
SSBP1-207ENST00000468267 GPTP24298 496 aa22.23■■□□□ 1.15
SSBP1-207ENST00000468267 GTF2E1P29083 439 aaPredicted RBP22.23■■□□□ 1.15
SSBP1-207ENST00000468267 C1QTNF8P60827 252 aa22.23■■□□□ 1.15
SSBP1-207ENST00000468267 DUSP27Q5VZP5 1158 aa22.23■■□□□ 1.15
SSBP1-207ENST00000468267 COPS6Q7L5N1 327 aa22.23■■□□□ 1.15
SSBP1-207ENST00000468267 CACNA1SQ13698 1873 aa22.23■■□□□ 1.15
SSBP1-207ENST00000468267 CCDC88AQ3V6T2 1871 aa22.23■■□□□ 1.15
SSBP1-207ENST00000468267 HDGFL1Q5TGJ6 251 aa22.22■■□□□ 1.15
SSBP1-207ENST00000468267 XAGE3Q8WTP9 111 aa22.22■■□□□ 1.15
SSBP1-207ENST00000468267 RNF181Q9P0P0 153 aa22.22■■□□□ 1.15
SSBP1-207ENST00000468267 CHPF2Q9P2E5 772 aa22.22■■□□□ 1.15
SSBP1-207ENST00000468267 UBN2Q6ZU65 1347 aa22.22■■□□□ 1.15
SSBP1-207ENST00000468267 ARFGEF2Q9Y6D5 1785 aa22.22■■□□□ 1.15
SSBP1-207ENST00000468267 C21orf2O43822 256 aa22.21■■□□□ 1.15
SSBP1-207ENST00000468267 NPR1P16066 1061 aa22.21■■□□□ 1.15
SSBP1-207ENST00000468267 RASSF7Q02833 373 aa22.21■■□□□ 1.15
SSBP1-207ENST00000468267 AIMP1Q12904 312 aaKnown RBP22.21■■□□□ 1.15
SSBP1-207ENST00000468267 SUSD4Q5VX71 490 aa22.21■■□□□ 1.15
SSBP1-207ENST00000468267 IBTKQ9P2D0 1353 aaPredicted RBP22.21■■□□□ 1.15
SSBP1-207ENST00000468267 FER1L6Q2WGJ9 1857 aa22.2■■□□□ 1.14
SSBP1-207ENST00000468267 CCDC27Q2M243 656 aa22.2■■□□□ 1.14
SSBP1-207ENST00000468267 ERFEQ4G0M1 354 aa22.2■■□□□ 1.14
SSBP1-207ENST00000468267 PRPF40BQ6NWY9 871 aaKnown RBP22.2■■□□□ 1.14
SSBP1-207ENST00000468267 NUTM1Q86Y26 1132 aa22.2■■□□□ 1.14
SSBP1-207ENST00000468267 ZNF219Q9P2Y4 722 aaPredicted RBP22.2■■□□□ 1.14
SSBP1-207ENST00000468267 DBF4Q9UBU7 674 aaPredicted RBP22.2■■□□□ 1.14
SSBP1-207ENST00000468267 NFKBIEO00221 500 aa22.19■■□□□ 1.14
SSBP1-207ENST00000468267 LMNB1P20700 586 aa22.19■■□□□ 1.14
SSBP1-207ENST00000468267 PRELPP51888 382 aa22.19■■□□□ 1.14
SSBP1-207ENST00000468267 PARP10Q53GL7 1025 aa22.19■■□□□ 1.14
SSBP1-207ENST00000468267 ABCC12Q96J65 1359 aa22.18■■□□□ 1.14
SSBP1-207ENST00000468267 NTSR2O95665 410 aa22.18■■□□□ 1.14
SSBP1-207ENST00000468267 NCBP3Q53F19 620 aaKnown RBP22.18■■□□□ 1.14
SSBP1-207ENST00000468267 PPP1R42Q7Z4L9 355 aa22.18■■□□□ 1.14
SSBP1-207ENST00000468267 ANKRD36CQ5JPF3 1778 aa22.17■■□□□ 1.14
SSBP1-207ENST00000468267 SENP3-EIF4A1A0A087X0R7 540 aa22.17■■□□□ 1.14
SSBP1-207ENST00000468267 HSP90AB3PQ58FF7 597 aa22.17■■□□□ 1.14
SSBP1-207ENST00000468267 WWC1Q8IX03 1113 aa22.17■■□□□ 1.14
SSBP1-207ENST00000468267 C7orf43Q8WVR3 580 aa22.17■■□□□ 1.14
SSBP1-207ENST00000468267 HYPKQ9NX55 129 aa22.17■■□□□ 1.14
SSBP1-207ENST00000468267 TNRC6CQ9HCJ0 1690 aaKnown RBP22.17■■□□□ 1.14
SSBP1-207ENST00000468267 RIC1Q4ADV7 1423 aa22.16■■□□□ 1.14
SSBP1-207ENST00000468267 CRY2Q49AN0 593 aa22.16■■□□□ 1.14
SSBP1-207ENST00000468267 SOGA3Q5TF21 947 aa22.16■■□□□ 1.14
SSBP1-207ENST00000468267 C8orf58Q8NAV2 365 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms