RNA–Protein interactions for RNA: ENST00000467465.1

HLA-DOA-203, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-203ENST00000467465 PIM2Q9P1W9 311 aa12.62□□□□□ -0.39
HLA-DOA-203ENST00000467465 PDZRN3Q9UPQ7 1066 aa12.62□□□□□ -0.39
HLA-DOA-203ENST00000467465 CHL1O00533 1208 aa12.61□□□□□ -0.39
HLA-DOA-203ENST00000467465 APAF1O14727 1248 aa12.61□□□□□ -0.39
HLA-DOA-203ENST00000467465 MRS2Q9HD23 443 aa12.61□□□□□ -0.39
HLA-DOA-203ENST00000467465 BCS1LQ9Y276 419 aa12.61□□□□□ -0.39
HLA-DOA-203ENST00000467465 ERVV-1B6SEH8 477 aa12.6□□□□□ -0.39
HLA-DOA-203ENST00000467465 NPHP1O15259 732 aa12.6□□□□□ -0.39
HLA-DOA-203ENST00000467465 KCNA3P22001 575 aa12.6□□□□□ -0.39
HLA-DOA-203ENST00000467465 KIF6Q6ZMV9 814 aa12.6□□□□□ -0.39
HLA-DOA-203ENST00000467465 ARHGAP27Q6ZUM4 889 aa12.6□□□□□ -0.39
HLA-DOA-203ENST00000467465 CNBD1Q8NA66 436 aa12.6□□□□□ -0.39
HLA-DOA-203ENST00000467465 CFAP44Q96MT7 982 aa12.6□□□□□ -0.39
HLA-DOA-203ENST00000467465 LAS1LQ9Y4W2 734 aaKnown RBP12.6□□□□□ -0.39
HLA-DOA-203ENST00000467465 HOXB7P09629 217 aa12.59□□□□□ -0.39
HLA-DOA-203ENST00000467465 PDE6BP35913 854 aa12.59□□□□□ -0.39
HLA-DOA-203ENST00000467465 ST5P78524 1137 aa12.59□□□□□ -0.39
HLA-DOA-203ENST00000467465 DALRD3Q5D0E6 543 aaKnown RBP12.59□□□□□ -0.39
HLA-DOA-203ENST00000467465 C16orf71Q8IYS4 520 aaPredicted RBP12.59□□□□□ -0.39
HLA-DOA-203ENST00000467465 BRIP1Q9BX63 1249 aa12.59□□□□□ -0.39
HLA-DOA-203ENST00000467465 MAP3K15Q6ZN16 1313 aa12.59□□□□□ -0.39
HLA-DOA-203ENST00000467465 ARFGEF2Q9Y6D5 1785 aa12.58□□□□□ -0.39
HLA-DOA-203ENST00000467465 H0YIN7 160 aa12.58□□□□□ -0.4
HLA-DOA-203ENST00000467465 CAPN15O75808 1086 aa12.58□□□□□ -0.4
HLA-DOA-203ENST00000467465 COL11A2P13942 1736 aaPredicted RBP12.58□□□□□ -0.4
HLA-DOA-203ENST00000467465 MYL6BP14649 208 aa12.58□□□□□ -0.4
HLA-DOA-203ENST00000467465 EIF2S2P20042 333 aaKnown RBP12.58□□□□□ -0.4
HLA-DOA-203ENST00000467465 GNAI1P63096 354 aa12.58□□□□□ -0.4
HLA-DOA-203ENST00000467465 CCDC184Q52MB2 194 aa12.58□□□□□ -0.4
HLA-DOA-203ENST00000467465 NCBP3Q53F19 620 aaKnown RBP12.58□□□□□ -0.4
HLA-DOA-203ENST00000467465 COL13A1Q5TAT6 717 aaPredicted RBP12.58□□□□□ -0.4
HLA-DOA-203ENST00000467465 PRR5LQ6MZQ0 368 aa12.58□□□□□ -0.4
HLA-DOA-203ENST00000467465 IFT57Q9NWB7 429 aa12.58□□□□□ -0.4
HLA-DOA-203ENST00000467465 NIP7Q9Y221 180 aaKnown RBP eCLIP12.58□□□□□ -0.4
HLA-DOA-203ENST00000467465 ANKRD36CQ5JPF3 1778 aa12.58□□□□□ -0.4
HLA-DOA-203ENST00000467465 CACNA1SQ13698 1873 aa12.57□□□□□ -0.4
HLA-DOA-203ENST00000467465 CHRNA5P30532 468 aa12.57□□□□□ -0.4
HLA-DOA-203ENST00000467465 CCDC27Q2M243 656 aa12.57□□□□□ -0.4
HLA-DOA-203ENST00000467465 TPTE2Q6XPS3 522 aa12.57□□□□□ -0.4
HLA-DOA-203ENST00000467465 NBPF5PQ86XG9 351 aaPredicted RBP12.57□□□□□ -0.4
HLA-DOA-203ENST00000467465 C2CD5Q86YS7 1000 aa12.57□□□□□ -0.4
HLA-DOA-203ENST00000467465 NGEFQ8N5V2 710 aa12.57□□□□□ -0.4
HLA-DOA-203ENST00000467465 CHMP4AQ9BY43 222 aa12.57□□□□□ -0.4
HLA-DOA-203ENST00000467465 NMRK2Q9NPI5 230 aa12.57□□□□□ -0.4
HLA-DOA-203ENST00000467465 ZNF853P0CG23 659 aa12.56□□□□□ -0.4
HLA-DOA-203ENST00000467465 TTLL6Q8N841 843 aa12.56□□□□□ -0.4
HLA-DOA-203ENST00000467465 RBM46Q8TBY0 533 aaKnown RBP12.56□□□□□ -0.4
HLA-DOA-203ENST00000467465 KLRG1Q96E93 195 aa12.56□□□□□ -0.4
HLA-DOA-203ENST00000467465 NYXQ9GZU5 481 aa12.56□□□□□ -0.4
HLA-DOA-203ENST00000467465 SBF1O95248 1867 aa12.56□□□□□ -0.4
HLA-DOA-203ENST00000467465 IBTKQ9P2D0 1353 aaPredicted RBP12.56□□□□□ -0.4
HLA-DOA-203ENST00000467465 HTRA3P83110 453 aa12.55□□□□□ -0.4
HLA-DOA-203ENST00000467465 HLFQ16534 295 aa12.55□□□□□ -0.4
HLA-DOA-203ENST00000467465 HDGFL1Q5TGJ6 251 aa12.55□□□□□ -0.4
HLA-DOA-203ENST00000467465 GIGYF2Q6Y7W6 1299 aaKnown RBP12.55□□□□□ -0.4
HLA-DOA-203ENST00000467465 TTLL7Q6ZT98 887 aa12.55□□□□□ -0.4
HLA-DOA-203ENST00000467465 DDX21Q9NR30 783 aaKnown RBP eCLIP12.55□□□□□ -0.4
HLA-DOA-203ENST00000467465 MBIPQ9NS73 344 aa12.55□□□□□ -0.4
HLA-DOA-203ENST00000467465 GTF2E1P29083 439 aaPredicted RBP12.54□□□□□ -0.4
HLA-DOA-203ENST00000467465 FSTL1Q12841 308 aa12.54□□□□□ -0.4
HLA-DOA-203ENST00000467465 PDIA6Q15084 440 aa12.54□□□□□ -0.4
HLA-DOA-203ENST00000467465 TNS4Q8IZW8 715 aa12.54□□□□□ -0.4
HLA-DOA-203ENST00000467465 JMYQ8N9B5 988 aa12.54□□□□□ -0.4
HLA-DOA-203ENST00000467465 ZBTB3Q9H5J0 574 aa12.54□□□□□ -0.4
HLA-DOA-203ENST00000467465 CCDC88AQ3V6T2 1871 aa12.53□□□□□ -0.4
HLA-DOA-203ENST00000467465 KRT24Q2M2I5 525 aa12.53□□□□□ -0.4
HLA-DOA-203ENST00000467465 PARP10Q53GL7 1025 aa12.53□□□□□ -0.4
HLA-DOA-203ENST00000467465 HSP90AB3PQ58FF7 597 aa12.53□□□□□ -0.4
HLA-DOA-203ENST00000467465 DUSP27Q5VZP5 1158 aa12.53□□□□□ -0.4
HLA-DOA-203ENST00000467465 STYK1Q6J9G0 422 aa12.53□□□□□ -0.4
HLA-DOA-203ENST00000467465 LRP10Q7Z4F1 713 aa12.53□□□□□ -0.4
HLA-DOA-203ENST00000467465 CNKSR1Q969H4 720 aa12.53□□□□□ -0.4
HLA-DOA-203ENST00000467465 ZNF622Q969S3 477 aaKnown RBP eCLIP12.53□□□□□ -0.4
HLA-DOA-203ENST00000467465 DBF4Q9UBU7 674 aaPredicted RBP12.53□□□□□ -0.4
HLA-DOA-203ENST00000467465 IL16Q14005 1332 aa12.53□□□□□ -0.4
HLA-DOA-203ENST00000467465 RIC1Q4ADV7 1423 aa12.53□□□□□ -0.4
HLA-DOA-203ENST00000467465 FER1L6Q2WGJ9 1857 aa12.53□□□□□ -0.4
HLA-DOA-203ENST00000467465 CACNA1FO60840 1977 aa12.52□□□□□ -0.4
HLA-DOA-203ENST00000467465 SRGNP10124 158 aa12.52□□□□□ -0.41
HLA-DOA-203ENST00000467465 PROSER3Q2NL68 480 aa12.52□□□□□ -0.41
HLA-DOA-203ENST00000467465 C9orf131Q5VYM1 1079 aa12.52□□□□□ -0.41
HLA-DOA-203ENST00000467465 PPP1R42Q7Z4L9 355 aa12.52□□□□□ -0.41
HLA-DOA-203ENST00000467465 WWC1Q8IX03 1113 aa12.52□□□□□ -0.41
HLA-DOA-203ENST00000467465 NECTIN2Q92692 538 aa12.52□□□□□ -0.41
HLA-DOA-203ENST00000467465 MASTLQ96GX5 879 aa12.52□□□□□ -0.41
HLA-DOA-203ENST00000467465 RRAGCQ9HB90 399 aa12.52□□□□□ -0.41
HLA-DOA-203ENST00000467465 HYPKQ9NX55 129 aa12.52□□□□□ -0.41
HLA-DOA-203ENST00000467465 CHPF2Q9P2E5 772 aa12.52□□□□□ -0.41
HLA-DOA-203ENST00000467465 SLX4Q8IY92 1834 aa12.52□□□□□ -0.41
HLA-DOA-203ENST00000467465 DICER1Q9UPY3 1922 aaKnown RBP12.51□□□□□ -0.41
HLA-DOA-203ENST00000467465 KLRG2A4D1S0 409 aaPredicted RBP12.51□□□□□ -0.41
HLA-DOA-203ENST00000467465 ANXA1P04083 346 aa12.51□□□□□ -0.41
HLA-DOA-203ENST00000467465 NPR1P16066 1061 aa12.51□□□□□ -0.41
HLA-DOA-203ENST00000467465 PRELPP51888 382 aa12.51□□□□□ -0.41
HLA-DOA-203ENST00000467465 SOGA3Q5TF21 947 aa12.51□□□□□ -0.41
HLA-DOA-203ENST00000467465 COPS6Q7L5N1 327 aa12.51□□□□□ -0.41
HLA-DOA-203ENST00000467465 ZNF34Q8IZ26 560 aa12.51□□□□□ -0.41
HLA-DOA-203ENST00000467465 CCDC24Q8N4L8 307 aa12.51□□□□□ -0.41
HLA-DOA-203ENST00000467465 XAGE3Q8WTP9 111 aa12.51□□□□□ -0.41
HLA-DOA-203ENST00000467465 RNF123Q5XPI4 1314 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms