RNA–Protein interactions for RNA: ENST00000467387.1

SPTA1-204, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 5

Gene SPTA1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-204ENST00000467387 GNPATO15228 680 aa10.33□□□□□ -0.76
SPTA1-204ENST00000467387 MAP3K7O43318 606 aa10.33□□□□□ -0.76
SPTA1-204ENST00000467387 CENPBP07199 599 aaPredicted RBP10.33□□□□□ -0.76
SPTA1-204ENST00000467387 TSR1Q2NL82 804 aaKnown RBP10.33□□□□□ -0.76
SPTA1-204ENST00000467387 C6orf132Q5T0Z8 1188 aa10.33□□□□□ -0.76
SPTA1-204ENST00000467387 RBM26Q5T8P6 1007 aaKnown RBP10.33□□□□□ -0.76
SPTA1-204ENST00000467387 TMOD3Q9NYL9 352 aa10.33□□□□□ -0.76
SPTA1-204ENST00000467387 TAF1LQ8IZX4 1826 aa10.33□□□□□ -0.76
SPTA1-204ENST00000467387 FYB1O15117 783 aa10.32□□□□□ -0.76
SPTA1-204ENST00000467387 CYP27B1O15528 508 aa10.32□□□□□ -0.76
SPTA1-204ENST00000467387 SSFA2P28290 1259 aa10.32□□□□□ -0.76
SPTA1-204ENST00000467387 DIEXFQ68CQ4 756 aaKnown RBP10.32□□□□□ -0.76
SPTA1-204ENST00000467387 SMIM5Q71RC9 77 aa10.32□□□□□ -0.76
SPTA1-204ENST00000467387 KCNK17Q96T54 332 aa10.32□□□□□ -0.76
SPTA1-204ENST00000467387 SPG7Q9UQ90 795 aa10.32□□□□□ -0.76
SPTA1-204ENST00000467387 KIF24Q5T7B8 1368 aa10.31□□□□□ -0.76
SPTA1-204ENST00000467387 PKD1L3Q7Z443 1732 aa10.31□□□□□ -0.76
SPTA1-204ENST00000467387 LOC102724428A0A0B4J2F2 783 aa10.31□□□□□ -0.76
SPTA1-204ENST00000467387 TULP1O00294 542 aaPredicted RBP10.31□□□□□ -0.76
SPTA1-204ENST00000467387 ARHGAP33O14559 1287 aa10.31□□□□□ -0.76
SPTA1-204ENST00000467387 PTPREP23469 700 aa10.31□□□□□ -0.76
SPTA1-204ENST00000467387 SIK1P57059 783 aa10.31□□□□□ -0.76
SPTA1-204ENST00000467387 CDCA8Q53HL2 280 aa10.31□□□□□ -0.76
SPTA1-204ENST00000467387 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.31□□□□□ -0.76
SPTA1-204ENST00000467387 AMIGO3Q86WK7 504 aa10.31□□□□□ -0.76
SPTA1-204ENST00000467387 PIGBQ92521 554 aa10.31□□□□□ -0.76
SPTA1-204ENST00000467387 UBR3Q6ZT12 1888 aa10.3□□□□□ -0.76
SPTA1-204ENST00000467387 MMP10P09238 476 aa10.3□□□□□ -0.76
SPTA1-204ENST00000467387 CDAN1Q8IWY9 1227 aa10.3□□□□□ -0.76
SPTA1-204ENST00000467387 LINC00116Q8NCU8 138 aa10.3□□□□□ -0.76
SPTA1-204ENST00000467387 KRTAP3-3Q9BYR6 98 aa10.3□□□□□ -0.76
SPTA1-204ENST00000467387 KRTAP3-2Q9BYR7 98 aa10.3□□□□□ -0.76
SPTA1-204ENST00000467387 CDHR5Q9HBB8 845 aa10.3□□□□□ -0.76
SPTA1-204ENST00000467387 EMILIN1Q9Y6C2 1016 aa10.3□□□□□ -0.76
SPTA1-204ENST00000467387 CLSPNQ9HAW4 1339 aa10.3□□□□□ -0.76
SPTA1-204ENST00000467387 ITGB4P16144 1822 aa10.29□□□□□ -0.76
SPTA1-204ENST00000467387 PPP1R3GB7ZBB8 358 aa10.29□□□□□ -0.76
SPTA1-204ENST00000467387 ATP6V1AP38606 617 aa10.29□□□□□ -0.76
SPTA1-204ENST00000467387 PSEN2P49810 448 aa10.29□□□□□ -0.76
SPTA1-204ENST00000467387 BCS1LQ9Y276 419 aa10.29□□□□□ -0.76
SPTA1-204ENST00000467387 CICQ96RK0 1608 aaPredicted RBP10.29□□□□□ -0.76
SPTA1-204ENST00000467387 COL9A1P20849 921 aa10.28□□□□□ -0.76
SPTA1-204ENST00000467387 PXDNLA1KZ92 1463 aa10.28□□□□□ -0.76
SPTA1-204ENST00000467387 APLP1P51693 650 aa10.27□□□□□ -0.77
SPTA1-204ENST00000467387 ARHGAP27Q6ZUM4 889 aa10.27□□□□□ -0.77
SPTA1-204ENST00000467387 C16orf71Q8IYS4 520 aaPredicted RBP10.27□□□□□ -0.77
SPTA1-204ENST00000467387 POLR3GLQ9BT43 218 aa10.27□□□□□ -0.77
SPTA1-204ENST00000467387 NPDC1Q9NQX5 325 aaPredicted RBP10.27□□□□□ -0.77
SPTA1-204ENST00000467387 ASAP1Q9ULH1 1129 aa10.27□□□□□ -0.77
SPTA1-204ENST00000467387 GPR37O15354 613 aa10.26□□□□□ -0.77
SPTA1-204ENST00000467387 ITPK1Q13572 414 aa10.26□□□□□ -0.77
SPTA1-204ENST00000467387 DMRTA1Q5VZB9 504 aa10.26□□□□□ -0.77
SPTA1-204ENST00000467387 IFNL2Q8IZJ0 200 aa10.26□□□□□ -0.77
SPTA1-204ENST00000467387 CCDC87Q9NVE4 849 aa10.26□□□□□ -0.77
SPTA1-204ENST00000467387 RTCBQ9Y3I0 505 aaKnown RBP10.26□□□□□ -0.77
SPTA1-204ENST00000467387 NCAPD2Q15021 1401 aa10.25□□□□□ -0.77
SPTA1-204ENST00000467387 C10orf71Q711Q0 1435 aa10.25□□□□□ -0.77
SPTA1-204ENST00000467387 A0A0G2JLW4 131 aa10.25□□□□□ -0.77
SPTA1-204ENST00000467387 FCHSD2O94868 740 aa10.25□□□□□ -0.77
SPTA1-204ENST00000467387 PHKG2P15735 406 aa10.25□□□□□ -0.77
SPTA1-204ENST00000467387 TNNT2P45379 298 aaPredicted RBP10.25□□□□□ -0.77
SPTA1-204ENST00000467387 LSM11P83369 360 aaKnown RBP eCLIP10.25□□□□□ -0.77
SPTA1-204ENST00000467387 PTGDRQ13258 359 aa10.25□□□□□ -0.77
SPTA1-204ENST00000467387 TRAPPC3LQ5T215 181 aa10.25□□□□□ -0.77
SPTA1-204ENST00000467387 ANKRD26Q9UPS8 1709 aa10.24□□□□□ -0.77
SPTA1-204ENST00000467387 RFC4P35249 363 aa10.24□□□□□ -0.77
SPTA1-204ENST00000467387 NLGN1Q8N2Q7 840 aa10.24□□□□□ -0.77
SPTA1-204ENST00000467387 EYA1Q99502 592 aa10.24□□□□□ -0.77
SPTA1-204ENST00000467387 ATG3Q9NT62 314 aa10.24□□□□□ -0.77
SPTA1-204ENST00000467387 PCDH10Q9P2E7 1040 aa10.24□□□□□ -0.77
SPTA1-204ENST00000467387 PARP3Q9Y6F1 533 aa10.24□□□□□ -0.77
SPTA1-204ENST00000467387 PLEKHG2Q9H7P9 1386 aa10.24□□□□□ -0.77
SPTA1-204ENST00000467387 MAP2P11137 1827 aaKnown RBP10.23□□□□□ -0.77
SPTA1-204ENST00000467387 TOMM70O94826 608 aa10.23□□□□□ -0.77
SPTA1-204ENST00000467387 DPEP1P16444 411 aa10.23□□□□□ -0.77
SPTA1-204ENST00000467387 TGFB2P61812 414 aa10.23□□□□□ -0.77
SPTA1-204ENST00000467387 GPIHBP1Q8IV16 184 aa10.23□□□□□ -0.77
SPTA1-204ENST00000467387 ZBED2Q9BTP6 218 aa10.23□□□□□ -0.77
SPTA1-204ENST00000467387 NMRK2Q9NPI5 230 aa10.23□□□□□ -0.77
SPTA1-204ENST00000467387 C4AP0C0L4 1744 aa10.23□□□□□ -0.77
SPTA1-204ENST00000467387 WASHC2AQ641Q2 1341 aa10.23□□□□□ -0.77
SPTA1-204ENST00000467387 KDRP35968 1356 aa10.23□□□□□ -0.77
SPTA1-204ENST00000467387 N4BP2Q86UW6 1770 aaPredicted RBP10.22□□□□□ -0.77
SPTA1-204ENST00000467387 HSP90AB1P08238 724 aaKnown RBP10.22□□□□□ -0.77
SPTA1-204ENST00000467387 ZNF530Q6P9A1 599 aaPredicted RBP10.22□□□□□ -0.77
SPTA1-204ENST00000467387 CARD14Q9BXL6 1004 aa10.22□□□□□ -0.77
SPTA1-204ENST00000467387 SLC4A5Q9BY07 1137 aa10.22□□□□□ -0.77
SPTA1-204ENST00000467387 CABP4P57796 275 aa10.21□□□□□ -0.77
SPTA1-204ENST00000467387 EIF4A2Q14240 407 aaKnown RBP10.21□□□□□ -0.77
SPTA1-204ENST00000467387 C9orf131Q5VYM1 1079 aa10.21□□□□□ -0.77
SPTA1-204ENST00000467387 CNTNAP4Q9C0A0 1308 aa10.21□□□□□ -0.78
SPTA1-204ENST00000467387 ERVV-2B6SEH9 535 aa10.2□□□□□ -0.78
SPTA1-204ENST00000467387 PLEKHO1Q53GL0 409 aaPredicted RBP10.2□□□□□ -0.78
SPTA1-204ENST00000467387 DALRD3Q5D0E6 543 aaKnown RBP10.2□□□□□ -0.78
SPTA1-204ENST00000467387 C1orf141Q5JVX7 400 aa10.2□□□□□ -0.78
SPTA1-204ENST00000467387 KDM2BQ8NHM5 1336 aa10.2□□□□□ -0.78
SPTA1-204ENST00000467387 DCAF5Q96JK2 942 aa10.2□□□□□ -0.78
SPTA1-204ENST00000467387 KIAA1551Q9HCM1 1747 aa10.2□□□□□ -0.78
SPTA1-204ENST00000467387 KIF13BQ9NQT8 1826 aa10.2□□□□□ -0.78
SPTA1-204ENST00000467387 RNF181Q9P0P0 153 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms