RNA–Protein interactions for RNA: ENST00000467095.5

SYN3-208, Transcript of synapsin III, humanhuman

TSL 3

Gene SYN3, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-208ENST00000467095 LINC00116Q8NCU8 138 aa9.17□□□□□ -0.94
SYN3-208ENST00000467095 RTF1Q92541 710 aaKnown RBP9.17□□□□□ -0.94
SYN3-208ENST00000467095 ZNF496Q96IT1 587 aaPredicted RBP9.17□□□□□ -0.94
SYN3-208ENST00000467095 LOC102724428A0A0B4J2F2 783 aa9.16□□□□□ -0.94
SYN3-208ENST00000467095 PTCD1O75127 700 aaKnown RBP9.16□□□□□ -0.94
SYN3-208ENST00000467095 NEFMP07197 916 aa9.16□□□□□ -0.94
SYN3-208ENST00000467095 SIK1P57059 783 aa9.16□□□□□ -0.94
SYN3-208ENST00000467095 EIF4A1P60842 406 aaKnown RBP9.16□□□□□ -0.94
SYN3-208ENST00000467095 PDGFDQ9GZP0 370 aaPredicted RBP9.16□□□□□ -0.94
SYN3-208ENST00000467095 MBIPQ9NS73 344 aa9.16□□□□□ -0.94
SYN3-208ENST00000467095 N4BP2Q86UW6 1770 aaPredicted RBP9.15□□□□□ -0.94
SYN3-208ENST00000467095 DNAJC10Q8IXB1 793 aa9.15□□□□□ -0.94
SYN3-208ENST00000467095 TSR2Q969E8 191 aaKnown RBP9.15□□□□□ -0.94
SYN3-208ENST00000467095 CDCA7LQ96GN5 454 aa9.15□□□□□ -0.94
SYN3-208ENST00000467095 CFAP44Q96MT7 982 aa9.15□□□□□ -0.94
SYN3-208ENST00000467095 TMEM121BQ9BXQ6 578 aaPredicted RBP9.15□□□□□ -0.94
SYN3-208ENST00000467095 USP16Q9Y5T5 823 aa9.15□□□□□ -0.94
SYN3-208ENST00000467095 LAMB2P55268 1798 aa9.14□□□□□ -0.95
SYN3-208ENST00000467095 CYP19A1P11511 503 aaPredicted RBP9.14□□□□□ -0.95
SYN3-208ENST00000467095 ATP6V1AP38606 617 aa9.14□□□□□ -0.95
SYN3-208ENST00000467095 LMOD3Q0VAK6 560 aa9.14□□□□□ -0.95
SYN3-208ENST00000467095 INTS5Q6P9B9 1019 aaKnown RBP9.14□□□□□ -0.95
SYN3-208ENST00000467095 TRMT2AQ8IZ69 625 aaKnown RBP9.14□□□□□ -0.95
SYN3-208ENST00000467095 TSPYL6Q8N831 410 aa9.14□□□□□ -0.95
SYN3-208ENST00000467095 SMARCC1Q92922 1105 aaPredicted RBP9.14□□□□□ -0.95
SYN3-208ENST00000467095 CCNL1Q9UK58 526 aaPredicted RBP9.14□□□□□ -0.95
SYN3-208ENST00000467095 ANKRD31Q8N7Z5 1873 aa9.14□□□□□ -0.95
SYN3-208ENST00000467095 KIF13BQ9NQT8 1826 aa9.14□□□□□ -0.95
SYN3-208ENST00000467095 KIAA1551Q9HCM1 1747 aa9.14□□□□□ -0.95
SYN3-208ENST00000467095 NRXN2Q9P2S2 1712 aa9.14□□□□□ -0.95
SYN3-208ENST00000467095 GIGYF1O75420 1035 aaPredicted RBP9.13□□□□□ -0.95
SYN3-208ENST00000467095 SF3B2Q13435 895 aaKnown RBP9.13□□□□□ -0.95
SYN3-208ENST00000467095 SLC27A3Q5K4L6 730 aa9.13□□□□□ -0.95
SYN3-208ENST00000467095 WDR63Q8IWG1 891 aa9.13□□□□□ -0.95
SYN3-208ENST00000467095 C8orf58Q8NAV2 365 aa9.13□□□□□ -0.95
SYN3-208ENST00000467095 IFT57Q9NWB7 429 aa9.13□□□□□ -0.95
SYN3-208ENST00000467095 TSPYL4Q9UJ04 414 aa9.13□□□□□ -0.95
SYN3-208ENST00000467095 LAS1LQ9Y4W2 734 aaKnown RBP9.13□□□□□ -0.95
SYN3-208ENST00000467095 CACNA1SQ13698 1873 aa9.13□□□□□ -0.95
SYN3-208ENST00000467095 IL16Q14005 1332 aa9.12□□□□□ -0.95
SYN3-208ENST00000467095 FANCIQ9NVI1 1328 aa9.12□□□□□ -0.95
SYN3-208ENST00000467095 NBPF26B4DH59 902 aa9.12□□□□□ -0.95
SYN3-208ENST00000467095 PIP4K2AP48426 406 aaPredicted RBP9.12□□□□□ -0.95
SYN3-208ENST00000467095 SLFN5Q08AF3 891 aa9.12□□□□□ -0.95
SYN3-208ENST00000467095 NBPF14Q5TI25 921 aa9.12□□□□□ -0.95
SYN3-208ENST00000467095 NBPF10Q6P3W6 841 aaKnown RBP9.12□□□□□ -0.95
SYN3-208ENST00000467095 LRP10Q7Z4F1 713 aa9.12□□□□□ -0.95
SYN3-208ENST00000467095 VSIG10Q8N0Z9 540 aa9.12□□□□□ -0.95
SYN3-208ENST00000467095 NBPF15Q8N660 670 aa9.12□□□□□ -0.95
SYN3-208ENST00000467095 BABAM1Q9NWV8 329 aa9.12□□□□□ -0.95
SYN3-208ENST00000467095 PNPLA7Q6ZV29 1317 aa9.11□□□□□ -0.95
SYN3-208ENST00000467095 TAF1P21675 1872 aa9.11□□□□□ -0.95
SYN3-208ENST00000467095 BRCA1P38398 1863 aaKnown RBP9.11□□□□□ -0.95
SYN3-208ENST00000467095 A1BGP04217 495 aa9.11□□□□□ -0.95
SYN3-208ENST00000467095 CRKLP46109 303 aaKnown RBP9.11□□□□□ -0.95
SYN3-208ENST00000467095 GNAI1P63096 354 aa9.11□□□□□ -0.95
SYN3-208ENST00000467095 HNRNPUQ00839 825 aaKnown RBP eCLIP9.11□□□□□ -0.95
SYN3-208ENST00000467095 PDIA6Q15084 440 aa9.11□□□□□ -0.95
SYN3-208ENST00000467095 SLC15A2Q16348 729 aa9.11□□□□□ -0.95
SYN3-208ENST00000467095 FMNL2Q96PY5 1086 aa9.11□□□□□ -0.95
SYN3-208ENST00000467095 CNTNAP4Q9C0A0 1308 aa9.1□□□□□ -0.95
SYN3-208ENST00000467095 RC3H1Q5TC82 1133 aaKnown RBP9.1□□□□□ -0.95
SYN3-208ENST00000467095 DUSP27Q5VZP5 1158 aa9.1□□□□□ -0.95
SYN3-208ENST00000467095 TTC5Q8N0Z6 440 aa9.1□□□□□ -0.95
SYN3-208ENST00000467095 NGEFQ8N5V2 710 aa9.1□□□□□ -0.95
SYN3-208ENST00000467095 ZBTB1Q9Y2K1 713 aa9.1□□□□□ -0.95
SYN3-208ENST00000467095 BOLA1Q9Y3E2 137 aa9.1□□□□□ -0.95
SYN3-208ENST00000467095 DDX60Q8IY21 1712 aaKnown RBP9.1□□□□□ -0.95
SYN3-208ENST00000467095 MYH3P11055 1940 aa9.09□□□□□ -0.95
SYN3-208ENST00000467095 PSDA5PKW4 1024 aaPredicted RBP9.09□□□□□ -0.95
SYN3-208ENST00000467095 ELL2O00472 640 aaPredicted RBP9.09□□□□□ -0.95
SYN3-208ENST00000467095 ANXA1P04083 346 aa9.09□□□□□ -0.95
SYN3-208ENST00000467095 SNRPA1P09661 255 aaKnown RBP9.09□□□□□ -0.95
SYN3-208ENST00000467095 EXOSC9Q06265 439 aaKnown RBP9.09□□□□□ -0.95
SYN3-208ENST00000467095 R3HDM1Q15032 1099 aaKnown RBP9.09□□□□□ -0.95
SYN3-208ENST00000467095 PROSER3Q2NL68 480 aa9.09□□□□□ -0.95
SYN3-208ENST00000467095 COL23A1Q86Y22 540 aaPredicted RBP9.09□□□□□ -0.95
SYN3-208ENST00000467095 DLEC1Q9Y238 1755 aa9.09□□□□□ -0.95
SYN3-208ENST00000467095 LRP5O75197 1615 aa9.09□□□□□ -0.95
SYN3-208ENST00000467095 SOS1Q07889 1333 aaPredicted RBP9.08□□□□□ -0.96
SYN3-208ENST00000467095 ZBED9Q6R2W3 1325 aa9.08□□□□□ -0.96
SYN3-208ENST00000467095 G3V3G9 751 aa9.08□□□□□ -0.96
SYN3-208ENST00000467095 VAMP4O75379 141 aa9.08□□□□□ -0.96
SYN3-208ENST00000467095 RPS6KA4O75676 772 aa9.08□□□□□ -0.96
SYN3-208ENST00000467095 EMP3P54852 163 aa9.08□□□□□ -0.96
SYN3-208ENST00000467095 EIF5P55010 431 aaKnown RBP9.08□□□□□ -0.96
SYN3-208ENST00000467095 EFCAB3Q8N7B9 438 aa9.08□□□□□ -0.96
SYN3-208ENST00000467095 NECTIN2Q92692 538 aa9.08□□□□□ -0.96
SYN3-208ENST00000467095 CCDC87Q9NVE4 849 aa9.08□□□□□ -0.96
SYN3-208ENST00000467095 COL11A2P13942 1736 aaPredicted RBP9.08□□□□□ -0.96
SYN3-208ENST00000467095 GNPATO15228 680 aa9.07□□□□□ -0.96
SYN3-208ENST00000467095 ARHGEF1Q92888 912 aaKnown RBP9.07□□□□□ -0.96
SYN3-208ENST00000467095 BCL2L12Q9HB09 334 aa9.07□□□□□ -0.96
SYN3-208ENST00000467095 TCERG1O14776 1098 aaKnown RBP9.06□□□□□ -0.96
SYN3-208ENST00000467095 CANXP27824 592 aaKnown RBP9.06□□□□□ -0.96
SYN3-208ENST00000467095 CALD1Q05682 793 aaKnown RBP9.06□□□□□ -0.96
SYN3-208ENST00000467095 SRP68Q9UHB9 627 aaKnown RBP9.06□□□□□ -0.96
SYN3-208ENST00000467095 COL15A1P39059 1388 aa9.06□□□□□ -0.96
SYN3-208ENST00000467095 TNRC6CQ9HCJ0 1690 aaKnown RBP9.06□□□□□ -0.96
SYN3-208ENST00000467095 SPEF2Q9C093 1822 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms