RNA–Protein interactions for RNA: ENST00000463097.1

COPS3-205, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-205ENST00000463097 ZNF232Q9UNY5 417 aa8.69□□□□□ -1.02
COPS3-205ENST00000463097 CADPSQ9ULU8 1353 aa8.69□□□□□ -1.02
COPS3-205ENST00000463097 ACBD3Q9H3P7 528 aa8.68□□□□□ -1.02
COPS3-205ENST00000463097 CABP1Q9NZU7 370 aa8.68□□□□□ -1.02
COPS3-205ENST00000463097 KLK14Q9P0G3 267 aa8.68□□□□□ -1.02
COPS3-205ENST00000463097 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.68□□□□□ -1.02
COPS3-205ENST00000463097 EMILIN1Q9Y6C2 1016 aa8.68□□□□□ -1.02
COPS3-205ENST00000463097 AK5Q9Y6K8 562 aa8.68□□□□□ -1.02
COPS3-205ENST00000463097 NR3C2P08235 984 aa8.67□□□□□ -1.02
COPS3-205ENST00000463097 PCSK2P16519 638 aa8.67□□□□□ -1.02
COPS3-205ENST00000463097 KCNC4Q03721 635 aa8.67□□□□□ -1.02
COPS3-205ENST00000463097 GNL2Q13823 731 aaKnown RBP8.67□□□□□ -1.02
COPS3-205ENST00000463097 L3MBTL2Q969R5 705 aa8.67□□□□□ -1.02
COPS3-205ENST00000463097 NEFLP07196 543 aa8.66□□□□□ -1.02
COPS3-205ENST00000463097 ATP2B1P20020 1258 aa8.66□□□□□ -1.02
COPS3-205ENST00000463097 CENPCQ03188 943 aa8.66□□□□□ -1.02
COPS3-205ENST00000463097 CLN3Q13286 438 aa8.66□□□□□ -1.02
COPS3-205ENST00000463097 ZNF295-AS1Q8N0V1 137 aa8.66□□□□□ -1.02
COPS3-205ENST00000463097 CRELD1Q96HD1 420 aa8.66□□□□□ -1.02
COPS3-205ENST00000463097 PHACTR1Q9C0D0 580 aa8.66□□□□□ -1.02
COPS3-205ENST00000463097 EIF1AYO14602 144 aaKnown RBP8.65□□□□□ -1.02
COPS3-205ENST00000463097 ADH1AP07327 375 aa8.65□□□□□ -1.02
COPS3-205ENST00000463097 CTSHP09668 335 aa8.65□□□□□ -1.02
COPS3-205ENST00000463097 ORC1Q13415 861 aa8.65□□□□□ -1.02
COPS3-205ENST00000463097 DNAJC2Q99543 621 aaKnown RBP8.65□□□□□ -1.02
COPS3-205ENST00000463097 FHDC1Q9C0D6 1143 aaPredicted RBP8.65□□□□□ -1.02
COPS3-205ENST00000463097 DNAJC25Q9H1X3 360 aa8.65□□□□□ -1.02
COPS3-205ENST00000463097 PARP3Q9Y6F1 533 aa8.65□□□□□ -1.02
COPS3-205ENST00000463097 TNNI2P48788 182 aa8.64□□□□□ -1.03
COPS3-205ENST00000463097 GIMAP6Q6P9H5 292 aa8.64□□□□□ -1.03
COPS3-205ENST00000463097 TREML1Q86YW5 311 aa8.64□□□□□ -1.03
COPS3-205ENST00000463097 KDF1Q8NAX2 398 aaPredicted RBP8.64□□□□□ -1.03
COPS3-205ENST00000463097 TTC16Q8NEE8 873 aa8.64□□□□□ -1.03
COPS3-205ENST00000463097 GPR152Q8TDT2 470 aa8.64□□□□□ -1.03
COPS3-205ENST00000463097 DHX38Q92620 1227 aaKnown RBP8.64□□□□□ -1.03
COPS3-205ENST00000463097 NUDT16Q96DE0 195 aaKnown RBP8.64□□□□□ -1.03
COPS3-205ENST00000463097 GMLQ99445 158 aa8.64□□□□□ -1.03
COPS3-205ENST00000463097 CUEDC1Q9NWM3 386 aaPredicted RBP8.64□□□□□ -1.03
COPS3-205ENST00000463097 SPG7Q9UQ90 795 aa8.64□□□□□ -1.03
COPS3-205ENST00000463097 C8orf34Q49A92 452 aa8.63□□□□□ -1.03
COPS3-205ENST00000463097 C1orf53Q5VUE5 145 aa8.63□□□□□ -1.03
COPS3-205ENST00000463097 PPARGC1BQ86YN6 1023 aaKnown RBP8.63□□□□□ -1.03
COPS3-205ENST00000463097 ARMC5Q96C12 935 aa8.63□□□□□ -1.03
COPS3-205ENST00000463097 LNPKQ9C0E8 428 aa8.63□□□□□ -1.03
COPS3-205ENST00000463097 GGNBP2Q9H3C7 697 aa8.63□□□□□ -1.03
COPS3-205ENST00000463097 FAM13BQ9NYF5 915 aa8.63□□□□□ -1.03
COPS3-205ENST00000463097 DDX41Q9UJV9 622 aaKnown RBP8.63□□□□□ -1.03
COPS3-205ENST00000463097 RPLP1P05386 114 aaKnown RBP8.62□□□□□ -1.03
COPS3-205ENST00000463097 EIF4BP23588 611 aaKnown RBP8.62□□□□□ -1.03
COPS3-205ENST00000463097 GTF2F1P35269 517 aaKnown RBP eCLIP8.62□□□□□ -1.03
COPS3-205ENST00000463097 ZNF654Q8IZM8 581 aa8.62□□□□□ -1.03
COPS3-205ENST00000463097 NLRP3Q96P20 1036 aa8.62□□□□□ -1.03
COPS3-205ENST00000463097 NIFKQ9BYG3 293 aaKnown RBP8.62□□□□□ -1.03
COPS3-205ENST00000463097 ITGBL1O95965 494 aaPredicted RBP8.61□□□□□ -1.03
COPS3-205ENST00000463097 DNAJA1P31689 397 aaKnown RBP8.61□□□□□ -1.03
COPS3-205ENST00000463097 PTGIRP43119 386 aa8.61□□□□□ -1.03
COPS3-205ENST00000463097 NOP9Q86U38 636 aaKnown RBP8.61□□□□□ -1.03
COPS3-205ENST00000463097 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.61□□□□□ -1.03
COPS3-205ENST00000463097 INPP5FQ9Y2H2 1132 aa8.61□□□□□ -1.03
COPS3-205ENST00000463097 A6NHS1 94 aa8.6□□□□□ -1.03
COPS3-205ENST00000463097 MEN1O00255 615 aa8.6□□□□□ -1.03
COPS3-205ENST00000463097 WNT7AO00755 349 aa8.6□□□□□ -1.03
COPS3-205ENST00000463097 OPLAHO14841 1288 aa8.6□□□□□ -1.03
COPS3-205ENST00000463097 PPM1GO15355 546 aaPredicted RBP8.6□□□□□ -1.03
COPS3-205ENST00000463097 CPNE3O75131 537 aaKnown RBP8.6□□□□□ -1.03
COPS3-205ENST00000463097 RACK1P63244 317 aaKnown RBP8.6□□□□□ -1.03
COPS3-205ENST00000463097 CBLBQ13191 982 aa8.6□□□□□ -1.03
COPS3-205ENST00000463097 ZNF394Q53GI3 561 aa8.6□□□□□ -1.03
COPS3-205ENST00000463097 PPP1R18Q6NYC8 613 aa8.6□□□□□ -1.03
COPS3-205ENST00000463097 LIAT1Q6ZQX7 453 aa8.6□□□□□ -1.03
COPS3-205ENST00000463097 MRGPRX2Q96LB1 330 aa8.6□□□□□ -1.03
COPS3-205ENST00000463097 ZSCAN10Q96SZ4 725 aaPredicted RBP8.6□□□□□ -1.03
COPS3-205ENST00000463097 BCS1LQ9Y276 419 aa8.6□□□□□ -1.03
COPS3-205ENST00000463097 MICAL2O94851 1124 aa8.59□□□□□ -1.03
COPS3-205ENST00000463097 ARID5AQ03989 594 aa8.59□□□□□ -1.03
COPS3-205ENST00000463097 PTPN12Q05209 780 aaKnown RBP8.59□□□□□ -1.03
COPS3-205ENST00000463097 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.59□□□□□ -1.03
COPS3-205ENST00000463097 USP48Q86UV5 1035 aa8.59□□□□□ -1.03
COPS3-205ENST00000463097 GIPC1O14908 333 aa8.58□□□□□ -1.04
COPS3-205ENST00000463097 GTF2E1P29083 439 aaPredicted RBP8.58□□□□□ -1.04
COPS3-205ENST00000463097 TXLNAP40222 546 aa8.58□□□□□ -1.04
COPS3-205ENST00000463097 TMEM214Q6NUQ4 689 aaKnown RBP8.58□□□□□ -1.04
COPS3-205ENST00000463097 Q6ZVU0 165 aa8.58□□□□□ -1.04
COPS3-205ENST00000463097 HS2ST1Q7LGA3 356 aa8.58□□□□□ -1.04
COPS3-205ENST00000463097 RHBDD1Q8TEB9 315 aa8.58□□□□□ -1.04
COPS3-205ENST00000463097 SRA1Q9HD15 236 aaKnown RBP8.58□□□□□ -1.04
COPS3-205ENST00000463097 PCDHGB7Q9Y5F8 929 aa8.58□□□□□ -1.04
COPS3-205ENST00000463097 NCLP19338 710 aaKnown RBP8.57□□□□□ -1.04
COPS3-205ENST00000463097 RBL2Q08999 1139 aa8.57□□□□□ -1.04
COPS3-205ENST00000463097 NNTQ13423 1086 aa8.57□□□□□ -1.04
COPS3-205ENST00000463097 CCDC144BQ3MJ40 725 aa8.57□□□□□ -1.04
COPS3-205ENST00000463097 VPS37DQ86XT2 251 aa8.57□□□□□ -1.04
COPS3-205ENST00000463097 AGBL1Q96MI9 1066 aa8.57□□□□□ -1.04
COPS3-205ENST00000463097 C12orf49Q9H741 205 aa8.57□□□□□ -1.04
COPS3-205ENST00000463097 USP31Q70CQ4 1352 aa8.57□□□□□ -1.04
COPS3-205ENST00000463097 HIF1AQ16665 826 aa8.56□□□□□ -1.04
COPS3-205ENST00000463097 CCDC74AQ96AQ1 378 aa8.56□□□□□ -1.04
COPS3-205ENST00000463097 OSBPL7Q9BZF2 842 aa8.56□□□□□ -1.04
COPS3-205ENST00000463097 GGT7Q9UJ14 662 aa8.56□□□□□ -1.04
COPS3-205ENST00000463097 TNFRSF21O75509 655 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms