RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 FHDC1Q9C0D6 1143 aaPredicted RBP5.32□□□□□ -1.56
HDAC6-212ENST00000461608 SHISA8B8ZZ34 492 aa5.31□□□□□ -1.56
HDAC6-212ENST00000461608 CLDN10P78369 228 aa5.31□□□□□ -1.56
HDAC6-212ENST00000461608 CENPCQ03188 943 aa5.31□□□□□ -1.56
HDAC6-212ENST00000461608 PSME1Q06323 249 aa5.31□□□□□ -1.56
HDAC6-212ENST00000461608 WDR44Q5JSH3 913 aa5.31□□□□□ -1.56
HDAC6-212ENST00000461608 C1orf229Q6ZS94 237 aaPredicted RBP5.31□□□□□ -1.56
HDAC6-212ENST00000461608 TAS1R3Q7RTX0 852 aa5.31□□□□□ -1.56
HDAC6-212ENST00000461608 CNKSR1Q969H4 720 aa5.31□□□□□ -1.56
HDAC6-212ENST00000461608 ZNF594Q96JF6 807 aaPredicted RBP5.31□□□□□ -1.56
HDAC6-212ENST00000461608 IVNS1ABPQ9Y6Y0 642 aa5.31□□□□□ -1.56
HDAC6-212ENST00000461608 ARID4AP29374 1257 aaPredicted RBP5.3□□□□□ -1.56
HDAC6-212ENST00000461608 DPYDQ12882 1025 aa5.3□□□□□ -1.56
HDAC6-212ENST00000461608 EFHC2Q5JST6 749 aa5.3□□□□□ -1.56
HDAC6-212ENST00000461608 ESYT1Q9BSJ8 1104 aa5.3□□□□□ -1.56
HDAC6-212ENST00000461608 HCN2Q9UL51 889 aa5.3□□□□□ -1.56
HDAC6-212ENST00000461608 APBA3O96018 575 aa5.29□□□□□ -1.56
HDAC6-212ENST00000461608 SSFA2P28290 1259 aa5.29□□□□□ -1.56
HDAC6-212ENST00000461608 LBRQ14739 615 aaKnown RBP5.29□□□□□ -1.56
HDAC6-212ENST00000461608 C4orf17Q53FE4 359 aa5.29□□□□□ -1.56
HDAC6-212ENST00000461608 ARTNQ5T4W7 220 aa5.29□□□□□ -1.56
HDAC6-212ENST00000461608 CCDC102BQ68D86 513 aa5.29□□□□□ -1.56
HDAC6-212ENST00000461608 SND1Q7KZF4 910 aaKnown RBP eCLIP5.29□□□□□ -1.56
HDAC6-212ENST00000461608 TPCN2Q8NHX9 752 aa5.29□□□□□ -1.56
HDAC6-212ENST00000461608 GZF1Q9H116 711 aaPredicted RBP5.29□□□□□ -1.56
HDAC6-212ENST00000461608 RUBCNLQ9H714 662 aa5.29□□□□□ -1.56
HDAC6-212ENST00000461608 ETNK1Q9HBU6 452 aa5.29□□□□□ -1.56
HDAC6-212ENST00000461608 BACH1O14867 736 aa5.28□□□□□ -1.56
HDAC6-212ENST00000461608 COBLO75128 1261 aa5.28□□□□□ -1.56
HDAC6-212ENST00000461608 DKK1O94907 266 aa5.28□□□□□ -1.56
HDAC6-212ENST00000461608 GNRH1P01148 92 aa5.28□□□□□ -1.56
HDAC6-212ENST00000461608 ATP2B4P23634 1241 aa5.28□□□□□ -1.56
HDAC6-212ENST00000461608 CHRNA4P43681 627 aa5.28□□□□□ -1.56
HDAC6-212ENST00000461608 RANGAP1P46060 587 aaPredicted RBP5.28□□□□□ -1.56
HDAC6-212ENST00000461608 FAM69CQ0P6D2 419 aa5.28□□□□□ -1.56
HDAC6-212ENST00000461608 PRRT3Q5FWE3 981 aa5.28□□□□□ -1.56
HDAC6-212ENST00000461608 SLCO4C1Q6ZQN7 724 aa5.28□□□□□ -1.56
HDAC6-212ENST00000461608 TXNDC2Q86VQ3 553 aa5.28□□□□□ -1.56
HDAC6-212ENST00000461608 XAGE2Q96GT9 111 aa5.28□□□□□ -1.56
HDAC6-212ENST00000461608 SUV39H2Q9H5I1 410 aa5.28□□□□□ -1.56
HDAC6-212ENST00000461608 ATXN7L1Q9ULK2 861 aaPredicted RBP5.28□□□□□ -1.56
HDAC6-212ENST00000461608 PCDHGA11Q9Y5H2 935 aa5.28□□□□□ -1.56
HDAC6-212ENST00000461608 C2CD2LO14523 706 aa5.27□□□□□ -1.57
HDAC6-212ENST00000461608 PTCD1O75127 700 aaKnown RBP5.27□□□□□ -1.57
HDAC6-212ENST00000461608 SPATA31C1P0DKV0 1188 aa5.27□□□□□ -1.57
HDAC6-212ENST00000461608 HOXB4P17483 251 aaPredicted RBP5.27□□□□□ -1.57
HDAC6-212ENST00000461608 MFAP1P55081 439 aaKnown RBP5.27□□□□□ -1.57
HDAC6-212ENST00000461608 CCDC27Q2M243 656 aa5.27□□□□□ -1.57
HDAC6-212ENST00000461608 ESCO1Q5FWF5 840 aa5.27□□□□□ -1.57
HDAC6-212ENST00000461608 LINC00114Q6XXX2 140 aa5.27□□□□□ -1.57
HDAC6-212ENST00000461608 GOLGA2P5Q9HBQ8 144 aa5.27□□□□□ -1.57
HDAC6-212ENST00000461608 GGA1Q9UJY5 639 aa5.27□□□□□ -1.57
HDAC6-212ENST00000461608 KIAA1024Q9UPX6 916 aa5.27□□□□□ -1.57
HDAC6-212ENST00000461608 A0A1B0GTH6 734 aa5.26□□□□□ -1.57
HDAC6-212ENST00000461608 ZBTB7BO15156 539 aaPredicted RBP5.26□□□□□ -1.57
HDAC6-212ENST00000461608 ERCC3P19447 782 aa5.26□□□□□ -1.57
HDAC6-212ENST00000461608 MSX1P28360 303 aa5.26□□□□□ -1.57
HDAC6-212ENST00000461608 SCNN1DP51172 638 aa5.26□□□□□ -1.57
HDAC6-212ENST00000461608 GNASQ5JWF2 1037 aa5.26□□□□□ -1.57
HDAC6-212ENST00000461608 COL26A1Q96A83 441 aa5.26□□□□□ -1.57
HDAC6-212ENST00000461608 ABHD17AQ96GS6 310 aa5.26□□□□□ -1.57
HDAC6-212ENST00000461608 BTBD6Q96KE9 485 aa5.26□□□□□ -1.57
HDAC6-212ENST00000461608 ZSCAN10Q96SZ4 725 aaPredicted RBP5.26□□□□□ -1.57
HDAC6-212ENST00000461608 CXXC1Q9P0U4 656 aaPredicted RBP5.26□□□□□ -1.57
HDAC6-212ENST00000461608 EGFL7Q9UHF1 273 aa5.26□□□□□ -1.57
HDAC6-212ENST00000461608 CARNS1A5YM72 827 aa5.25□□□□□ -1.57
HDAC6-212ENST00000461608 FOXO3O43524 673 aa5.25□□□□□ -1.57
HDAC6-212ENST00000461608 BNIP3LO60238 219 aa5.25□□□□□ -1.57
HDAC6-212ENST00000461608 CTBSQ01459 385 aa5.25□□□□□ -1.57
HDAC6-212ENST00000461608 FIGNL1Q6PIW4 674 aa5.25□□□□□ -1.57
HDAC6-212ENST00000461608 GAS2L2Q8NHY3 880 aa5.25□□□□□ -1.57
HDAC6-212ENST00000461608 NACC1Q96RE7 527 aa5.25□□□□□ -1.57
HDAC6-212ENST00000461608 NDFIP2Q9NV92 336 aa5.25□□□□□ -1.57
HDAC6-212ENST00000461608 USP3Q9Y6I4 520 aa5.25□□□□□ -1.57
HDAC6-212ENST00000461608 ATP4AP20648 1035 aa5.24□□□□□ -1.57
HDAC6-212ENST00000461608 FGFR3P22607 806 aa5.24□□□□□ -1.57
HDAC6-212ENST00000461608 IGFBP4P22692 258 aa5.24□□□□□ -1.57
HDAC6-212ENST00000461608 OCLNQ16625 522 aa5.24□□□□□ -1.57
HDAC6-212ENST00000461608 PHLDB3Q6NSJ2 640 aa5.24□□□□□ -1.57
HDAC6-212ENST00000461608 ZNF295-AS1Q8N0V1 137 aa5.24□□□□□ -1.57
HDAC6-212ENST00000461608 ZNF358Q9NW07 568 aa5.24□□□□□ -1.57
HDAC6-212ENST00000461608 SFI1A8K8P3 1242 aa5.23□□□□□ -1.57
HDAC6-212ENST00000461608 PAX4O43316 350 aa5.23□□□□□ -1.57
HDAC6-212ENST00000461608 ARAFP10398 606 aa5.23□□□□□ -1.57
HDAC6-212ENST00000461608 EPXP11678 715 aa5.23□□□□□ -1.57
HDAC6-212ENST00000461608 WEE1P30291 646 aa5.23□□□□□ -1.57
HDAC6-212ENST00000461608 TXKP42681 527 aa5.23□□□□□ -1.57
HDAC6-212ENST00000461608 PLA2G4AP47712 749 aa5.23□□□□□ -1.57
HDAC6-212ENST00000461608 GDF10P55107 478 aa5.23□□□□□ -1.57
HDAC6-212ENST00000461608 TLR1Q15399 786 aa5.23□□□□□ -1.57
HDAC6-212ENST00000461608 TMEM214Q6NUQ4 689 aaKnown RBP5.23□□□□□ -1.57
HDAC6-212ENST00000461608 CHSY3Q70JA7 882 aa5.23□□□□□ -1.57
HDAC6-212ENST00000461608 HINFPQ9BQA5 517 aa5.23□□□□□ -1.57
HDAC6-212ENST00000461608 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.23□□□□□ -1.57
HDAC6-212ENST00000461608 AMOTL2Q9Y2J4 779 aa5.23□□□□□ -1.57
HDAC6-212ENST00000461608 CHMP3Q9Y3E7 222 aa5.23□□□□□ -1.57
HDAC6-212ENST00000461608 NEURL1BA8MQ27 555 aa5.22□□□□□ -1.57
HDAC6-212ENST00000461608 PRMT3O60678 531 aa5.22□□□□□ -1.57
HDAC6-212ENST00000461608 INHAP05111 366 aa5.22□□□□□ -1.57
HDAC6-212ENST00000461608 ALAS2P22557 587 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms