RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 PDIA6Q15084 440 aa13.7□□□□□ -0.22
TRAPPC12-213ENST00000461577 TTLL7Q6ZT98 887 aa13.7□□□□□ -0.22
TRAPPC12-213ENST00000461577 MIER1Q8N108 512 aa13.7□□□□□ -0.22
TRAPPC12-213ENST00000461577 TSR2Q969E8 191 aaKnown RBP13.7□□□□□ -0.22
TRAPPC12-213ENST00000461577 DDX21Q9NR30 783 aaKnown RBP eCLIP13.7□□□□□ -0.22
TRAPPC12-213ENST00000461577 CARMIL3Q8ND23 1372 aa13.7□□□□□ -0.22
TRAPPC12-213ENST00000461577 NUP98P52948 1817 aa13.69□□□□□ -0.22
TRAPPC12-213ENST00000461577 N4BP2Q86UW6 1770 aaPredicted RBP13.69□□□□□ -0.22
TRAPPC12-213ENST00000461577 ERVV-1B6SEH8 477 aa13.69□□□□□ -0.22
TRAPPC12-213ENST00000461577 HLFQ16534 295 aa13.69□□□□□ -0.22
TRAPPC12-213ENST00000461577 PROSER3Q2NL68 480 aa13.69□□□□□ -0.22
TRAPPC12-213ENST00000461577 CHMP4AQ9BY43 222 aa13.69□□□□□ -0.22
TRAPPC12-213ENST00000461577 ZBTB3Q9H5J0 574 aa13.69□□□□□ -0.22
TRAPPC12-213ENST00000461577 CHPF2Q9P2E5 772 aa13.69□□□□□ -0.22
TRAPPC12-213ENST00000461577 NIP7Q9Y221 180 aaKnown RBP eCLIP13.69□□□□□ -0.22
TRAPPC12-213ENST00000461577 NRXN2Q9P2S2 1712 aa13.69□□□□□ -0.22
TRAPPC12-213ENST00000461577 AIMP1Q12904 312 aaKnown RBP13.68□□□□□ -0.22
TRAPPC12-213ENST00000461577 C8orf58Q8NAV2 365 aa13.68□□□□□ -0.22
TRAPPC12-213ENST00000461577 DBF4Q9UBU7 674 aaPredicted RBP13.68□□□□□ -0.22
TRAPPC12-213ENST00000461577 PXDNLA1KZ92 1463 aa13.67□□□□□ -0.22
TRAPPC12-213ENST00000461577 A0A0G2JLW4 131 aa13.67□□□□□ -0.22
TRAPPC12-213ENST00000461577 DPEP1P16444 411 aa13.67□□□□□ -0.22
TRAPPC12-213ENST00000461577 COPS6Q7L5N1 327 aa13.67□□□□□ -0.22
TRAPPC12-213ENST00000461577 CNBD1Q8NA66 436 aa13.67□□□□□ -0.22
TRAPPC12-213ENST00000461577 XAGE3Q8WTP9 111 aa13.67□□□□□ -0.22
TRAPPC12-213ENST00000461577 WWC3Q9ULE0 1092 aa13.67□□□□□ -0.22
TRAPPC12-213ENST00000461577 ST5P78524 1137 aa13.66□□□□□ -0.22
TRAPPC12-213ENST00000461577 GOLGA2Q08379 1002 aa13.66□□□□□ -0.22
TRAPPC12-213ENST00000461577 CCDC30Q5VVM6 783 aa13.66□□□□□ -0.22
TRAPPC12-213ENST00000461577 LRP10Q7Z4F1 713 aa13.66□□□□□ -0.22
TRAPPC12-213ENST00000461577 NBPF5PQ86XG9 351 aaPredicted RBP13.66□□□□□ -0.22
TRAPPC12-213ENST00000461577 TSPYL6Q8N831 410 aa13.66□□□□□ -0.22
TRAPPC12-213ENST00000461577 MYH16Q9H6N6 1097 aa13.66□□□□□ -0.22
TRAPPC12-213ENST00000461577 HYPKQ9NX55 129 aa13.66□□□□□ -0.22
TRAPPC12-213ENST00000461577 KIAA1551Q9HCM1 1747 aa13.66□□□□□ -0.22
TRAPPC12-213ENST00000461577 FANCIQ9NVI1 1328 aa13.65□□□□□ -0.22
TRAPPC12-213ENST00000461577 FAM177BA6PVY3 158 aa13.65□□□□□ -0.22
TRAPPC12-213ENST00000461577 GRIN3BO60391 1043 aa13.65□□□□□ -0.22
TRAPPC12-213ENST00000461577 TWISTNBQ3B726 338 aaPredicted RBP13.65□□□□□ -0.22
TRAPPC12-213ENST00000461577 PRR5LQ6MZQ0 368 aa13.65□□□□□ -0.22
TRAPPC12-213ENST00000461577 GIGYF2Q6Y7W6 1299 aaKnown RBP13.65□□□□□ -0.22
TRAPPC12-213ENST00000461577 YBX3P16989 372 aaKnown RBP eCLIP13.64□□□□□ -0.23
TRAPPC12-213ENST00000461577 GPTP24298 496 aa13.64□□□□□ -0.23
TRAPPC12-213ENST00000461577 GTF2E1P29083 439 aaPredicted RBP13.64□□□□□ -0.23
TRAPPC12-213ENST00000461577 CHRNA5P30532 468 aa13.64□□□□□ -0.23
TRAPPC12-213ENST00000461577 HSP90AB3PQ58FF7 597 aa13.64□□□□□ -0.23
TRAPPC12-213ENST00000461577 TPTE2Q6XPS3 522 aa13.64□□□□□ -0.23
TRAPPC12-213ENST00000461577 C2CD5Q86YS7 1000 aa13.64□□□□□ -0.23
TRAPPC12-213ENST00000461577 CCDC24Q8N4L8 307 aa13.64□□□□□ -0.23
TRAPPC12-213ENST00000461577 STK31Q9BXU1 1019 aa13.64□□□□□ -0.23
TRAPPC12-213ENST00000461577 NYXQ9GZU5 481 aa13.64□□□□□ -0.23
TRAPPC12-213ENST00000461577 PIM2Q9P1W9 311 aa13.64□□□□□ -0.23
TRAPPC12-213ENST00000461577 ATP10DQ9P241 1426 aa13.64□□□□□ -0.23
TRAPPC12-213ENST00000461577 H0YIN7 160 aa13.63□□□□□ -0.23
TRAPPC12-213ENST00000461577 PDE6BP35913 854 aa13.63□□□□□ -0.23
TRAPPC12-213ENST00000461577 BRIP1Q9BX63 1249 aa13.63□□□□□ -0.23
TRAPPC12-213ENST00000461577 SPINK5Q9NQ38 1064 aaPredicted RBP13.63□□□□□ -0.23
TRAPPC12-213ENST00000461577 PDZRN3Q9UPQ7 1066 aa13.63□□□□□ -0.23
TRAPPC12-213ENST00000461577 BCS1LQ9Y276 419 aa13.63□□□□□ -0.23
TRAPPC12-213ENST00000461577 BRCA1P38398 1863 aaKnown RBP13.63□□□□□ -0.23
TRAPPC12-213ENST00000461577 ANKRD31Q8N7Z5 1873 aa13.63□□□□□ -0.23
TRAPPC12-213ENST00000461577 CHD4Q14839 1912 aa13.62□□□□□ -0.23
TRAPPC12-213ENST00000461577 EXOSC9Q06265 439 aaKnown RBP13.62□□□□□ -0.23
TRAPPC12-213ENST00000461577 PARP10Q53GL7 1025 aa13.62□□□□□ -0.23
TRAPPC12-213ENST00000461577 ANKRD13DQ6ZTN6 518 aa13.62□□□□□ -0.23
TRAPPC12-213ENST00000461577 PPP1R42Q7Z4L9 355 aa13.62□□□□□ -0.23
TRAPPC12-213ENST00000461577 ZNF34Q8IZ26 560 aa13.62□□□□□ -0.23
TRAPPC12-213ENST00000461577 PLBD2Q8NHP8 589 aa13.62□□□□□ -0.23
TRAPPC12-213ENST00000461577 ANKRD36CQ5JPF3 1778 aa13.62□□□□□ -0.23
TRAPPC12-213ENST00000461577 ZNF521Q96K83 1311 aa13.62□□□□□ -0.23
TRAPPC12-213ENST00000461577 TCERG1O14776 1098 aaKnown RBP13.61□□□□□ -0.23
TRAPPC12-213ENST00000461577 KCNA3P22001 575 aa13.61□□□□□ -0.23
TRAPPC12-213ENST00000461577 DALRD3Q5D0E6 543 aaKnown RBP13.61□□□□□ -0.23
TRAPPC12-213ENST00000461577 RIC3Q7Z5B4 369 aa13.61□□□□□ -0.23
TRAPPC12-213ENST00000461577 ZNF622Q969S3 477 aaKnown RBP eCLIP13.61□□□□□ -0.23
TRAPPC12-213ENST00000461577 PHAXQ9H814 394 aaKnown RBP13.61□□□□□ -0.23
TRAPPC12-213ENST00000461577 UBN2Q6ZU65 1347 aa13.61□□□□□ -0.23
TRAPPC12-213ENST00000461577 DLEC1Q9Y238 1755 aa13.6□□□□□ -0.23
TRAPPC12-213ENST00000461577 E9PSI1 815 aa13.6□□□□□ -0.23
TRAPPC12-213ENST00000461577 DDX58O95786 925 aaKnown RBP13.6□□□□□ -0.23
TRAPPC12-213ENST00000461577 TCIRG1Q13488 830 aa13.6□□□□□ -0.23
TRAPPC12-213ENST00000461577 SUSD4Q5VX71 490 aa13.6□□□□□ -0.23
TRAPPC12-213ENST00000461577 CACNA1FO60840 1977 aa13.6□□□□□ -0.23
TRAPPC12-213ENST00000461577 IBTKQ9P2D0 1353 aaPredicted RBP13.59□□□□□ -0.23
TRAPPC12-213ENST00000461577 ARFGEF2Q9Y6D5 1785 aa13.59□□□□□ -0.23
TRAPPC12-213ENST00000461577 VAMP4O75379 141 aa13.59□□□□□ -0.23
TRAPPC12-213ENST00000461577 YY1P25490 414 aa13.59□□□□□ -0.23
TRAPPC12-213ENST00000461577 NUTM1Q86Y26 1132 aa13.59□□□□□ -0.23
TRAPPC12-213ENST00000461577 UTP14AQ9BVJ6 771 aaKnown RBP13.59□□□□□ -0.23
TRAPPC12-213ENST00000461577 ARFGEF1Q9Y6D6 1849 aa13.59□□□□□ -0.23
TRAPPC12-213ENST00000461577 COL11A2P13942 1736 aaPredicted RBP13.59□□□□□ -0.23
TRAPPC12-213ENST00000461577 NTSR2O95665 410 aa13.58□□□□□ -0.24
TRAPPC12-213ENST00000461577 SLC4A2P04920 1241 aa13.58□□□□□ -0.24
TRAPPC12-213ENST00000461577 ERFEQ4G0M1 354 aa13.58□□□□□ -0.24
TRAPPC12-213ENST00000461577 TTLL6Q8N841 843 aa13.58□□□□□ -0.24
TRAPPC12-213ENST00000461577 CACNA1SQ13698 1873 aa13.57□□□□□ -0.24
TRAPPC12-213ENST00000461577 SLFN5Q08AF3 891 aa13.57□□□□□ -0.24
TRAPPC12-213ENST00000461577 STYK1Q6J9G0 422 aa13.57□□□□□ -0.24
TRAPPC12-213ENST00000461577 ARHGAP27Q6ZUM4 889 aa13.57□□□□□ -0.24
TRAPPC12-213ENST00000461577 NLRP10Q86W26 655 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms