RNA–Protein interactions for RNA: ENST00000461249.1

GPN1-206, Transcript of GPN-loop GTPase 1, humanhuman

TSL 1 (best)

Gene GPN1, Length 969 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-206ENST00000461249 PSDA5PKW4 1024 aaPredicted RBP10.43□□□□□ -0.74
GPN1-206ENST00000461249 RPS6KA4O75676 772 aa10.43□□□□□ -0.74
GPN1-206ENST00000461249 CANXP27824 592 aaKnown RBP10.43□□□□□ -0.74
GPN1-206ENST00000461249 EXOSC9Q06265 439 aaKnown RBP10.43□□□□□ -0.74
GPN1-206ENST00000461249 R3HDM1Q15032 1099 aaKnown RBP10.43□□□□□ -0.74
GPN1-206ENST00000461249 SMIM5Q71RC9 77 aa10.43□□□□□ -0.74
GPN1-206ENST00000461249 TRMT2AQ8IZ69 625 aaKnown RBP10.43□□□□□ -0.74
GPN1-206ENST00000461249 TSPYL6Q8N831 410 aa10.43□□□□□ -0.74
GPN1-206ENST00000461249 NECTIN2Q92692 538 aa10.43□□□□□ -0.74
GPN1-206ENST00000461249 YTHDC1Q96MU7 727 aaKnown RBP10.43□□□□□ -0.74
GPN1-206ENST00000461249 RTCBQ9Y3I0 505 aaKnown RBP10.43□□□□□ -0.74
GPN1-206ENST00000461249 COL5A3P25940 1745 aaPredicted RBP10.43□□□□□ -0.74
GPN1-206ENST00000461249 CICQ96RK0 1608 aaPredicted RBP10.43□□□□□ -0.74
GPN1-206ENST00000461249 HOXB7P09629 217 aa10.42□□□□□ -0.74
GPN1-206ENST00000461249 PIP4K2AP48426 406 aaPredicted RBP10.42□□□□□ -0.74
GPN1-206ENST00000461249 TRAPPC3LQ5T215 181 aa10.42□□□□□ -0.74
GPN1-206ENST00000461249 AMIGO3Q86WK7 504 aa10.42□□□□□ -0.74
GPN1-206ENST00000461249 ZBTB1Q9Y2K1 713 aa10.42□□□□□ -0.74
GPN1-206ENST00000461249 PNPLA7Q6ZV29 1317 aa10.41□□□□□ -0.74
GPN1-206ENST00000461249 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.41□□□□□ -0.74
GPN1-206ENST00000461249 NBPF26B4DH59 902 aa10.41□□□□□ -0.74
GPN1-206ENST00000461249 VAMP4O75379 141 aa10.41□□□□□ -0.74
GPN1-206ENST00000461249 PHF14O94880 888 aa10.41□□□□□ -0.74
GPN1-206ENST00000461249 SSFA2P28290 1259 aa10.41□□□□□ -0.74
GPN1-206ENST00000461249 TWISTNBQ3B726 338 aaPredicted RBP10.41□□□□□ -0.74
GPN1-206ENST00000461249 HDGFL1Q5TGJ6 251 aa10.41□□□□□ -0.74
GPN1-206ENST00000461249 NBPF10Q6P3W6 841 aaKnown RBP10.41□□□□□ -0.74
GPN1-206ENST00000461249 ZNF467Q7Z7K2 595 aaPredicted RBP10.41□□□□□ -0.74
GPN1-206ENST00000461249 COL23A1Q86Y22 540 aaPredicted RBP10.41□□□□□ -0.74
GPN1-206ENST00000461249 NBPF15Q8N660 670 aa10.41□□□□□ -0.74
GPN1-206ENST00000461249 FLAD1Q8NFF5 587 aa10.41□□□□□ -0.74
GPN1-206ENST00000461249 SOS1Q07889 1333 aaPredicted RBP10.4□□□□□ -0.74
GPN1-206ENST00000461249 IL6STP40189 918 aaPredicted RBP10.4□□□□□ -0.74
GPN1-206ENST00000461249 EIF5P55010 431 aaKnown RBP10.4□□□□□ -0.74
GPN1-206ENST00000461249 BRPF1P55201 1214 aaPredicted RBP10.4□□□□□ -0.74
GPN1-206ENST00000461249 ARHGEF1Q92888 912 aaKnown RBP10.4□□□□□ -0.74
GPN1-206ENST00000461249 PDGFDQ9GZP0 370 aaPredicted RBP10.4□□□□□ -0.74
GPN1-206ENST00000461249 TSPYL2Q9H2G4 693 aaPredicted RBP10.4□□□□□ -0.74
GPN1-206ENST00000461249 ZNF330Q9Y3S2 320 aaPredicted RBP10.4□□□□□ -0.74
GPN1-206ENST00000461249 UBR3Q6ZT12 1888 aa10.4□□□□□ -0.75
GPN1-206ENST00000461249 ERBB4Q15303 1308 aa10.39□□□□□ -0.75
GPN1-206ENST00000461249 ANXA1P04083 346 aa10.39□□□□□ -0.75
GPN1-206ENST00000461249 MYL6BP14649 208 aa10.39□□□□□ -0.75
GPN1-206ENST00000461249 PDAP1Q13442 181 aaKnown RBP10.39□□□□□ -0.75
GPN1-206ENST00000461249 PDIA6Q15084 440 aa10.39□□□□□ -0.75
GPN1-206ENST00000461249 PROSER3Q2NL68 480 aa10.39□□□□□ -0.75
GPN1-206ENST00000461249 CCDC30Q5VVM6 783 aa10.39□□□□□ -0.75
GPN1-206ENST00000461249 NPM2Q86SE8 214 aaKnown RBP10.39□□□□□ -0.75
GPN1-206ENST00000461249 CHMP4AQ9BY43 222 aa10.39□□□□□ -0.75
GPN1-206ENST00000461249 CHPF2Q9P2E5 772 aa10.39□□□□□ -0.75
GPN1-206ENST00000461249 TUBGCP6Q96RT7 1819 aa10.39□□□□□ -0.75
GPN1-206ENST00000461249 LAMB4A4D0S4 1761 aa10.39□□□□□ -0.75
GPN1-206ENST00000461249 A0A087WZG4 1122 aa10.38□□□□□ -0.75
GPN1-206ENST00000461249 TCERG1O14776 1098 aaKnown RBP10.38□□□□□ -0.75
GPN1-206ENST00000461249 RFC4P35249 363 aa10.38□□□□□ -0.75
GPN1-206ENST00000461249 MFRPQ9BY79 579 aa10.38□□□□□ -0.75
GPN1-206ENST00000461249 DDX21Q9NR30 783 aaKnown RBP eCLIP10.38□□□□□ -0.75
GPN1-206ENST00000461249 DBF4Q9UBU7 674 aaPredicted RBP10.38□□□□□ -0.75
GPN1-206ENST00000461249 PCDHB8Q9UN66 801 aa10.38□□□□□ -0.75
GPN1-206ENST00000461249 PCDHB13Q9Y5F0 798 aa10.38□□□□□ -0.75
GPN1-206ENST00000461249 COL15A1P39059 1388 aa10.38□□□□□ -0.75
GPN1-206ENST00000461249 ZPR1O75312 459 aa10.37□□□□□ -0.75
GPN1-206ENST00000461249 QSER1Q2KHR3 1735 aa10.37□□□□□ -0.75
GPN1-206ENST00000461249 LRP10Q7Z4F1 713 aa10.37□□□□□ -0.75
GPN1-206ENST00000461249 STK31Q9BXU1 1019 aa10.37□□□□□ -0.75
GPN1-206ENST00000461249 SRP68Q9UHB9 627 aaKnown RBP10.37□□□□□ -0.75
GPN1-206ENST00000461249 TBC1D2BQ9UPU7 963 aa10.37□□□□□ -0.75
GPN1-206ENST00000461249 PITPNM1O00562 1244 aa10.36□□□□□ -0.75
GPN1-206ENST00000461249 USPL1Q5W0Q7 1092 aa10.36□□□□□ -0.75
GPN1-206ENST00000461249 COPS6Q7L5N1 327 aa10.36□□□□□ -0.75
GPN1-206ENST00000461249 DZIP3Q86Y13 1208 aaKnown RBP10.36□□□□□ -0.75
GPN1-206ENST00000461249 SLC16A10Q8TF71 515 aa10.36□□□□□ -0.75
GPN1-206ENST00000461249 ZC3H15Q8WU90 426 aaKnown RBP10.36□□□□□ -0.75
GPN1-206ENST00000461249 HYPKQ9NX55 129 aa10.36□□□□□ -0.75
GPN1-206ENST00000461249 NARFQ9UHQ1 456 aa10.36□□□□□ -0.75
GPN1-206ENST00000461249 ZBTB7AO95365 584 aa10.35□□□□□ -0.75
GPN1-206ENST00000461249 CT47B1P0C2W7 299 aaPredicted RBP10.35□□□□□ -0.75
GPN1-206ENST00000461249 AIMP1Q12904 312 aaKnown RBP10.35□□□□□ -0.75
GPN1-206ENST00000461249 TTLL7Q6ZT98 887 aa10.35□□□□□ -0.75
GPN1-206ENST00000461249 XAGE3Q8WTP9 111 aa10.35□□□□□ -0.75
GPN1-206ENST00000461249 PHAXQ9H814 394 aaKnown RBP10.35□□□□□ -0.75
GPN1-206ENST00000461249 USP42Q9H9J4 1324 aaKnown RBP10.34□□□□□ -0.75
GPN1-206ENST00000461249 CAMTA2O94983 1202 aa10.34□□□□□ -0.75
GPN1-206ENST00000461249 GYS1P13807 737 aa10.34□□□□□ -0.75
GPN1-206ENST00000461249 MSL1Q68DK7 614 aa10.34□□□□□ -0.75
GPN1-206ENST00000461249 KIF6Q6ZMV9 814 aa10.34□□□□□ -0.75
GPN1-206ENST00000461249 G2E3Q7L622 706 aa10.34□□□□□ -0.75
GPN1-206ENST00000461249 ZNF428Q96B54 188 aa10.34□□□□□ -0.75
GPN1-206ENST00000461249 MTFR1LQ9H019 292 aa10.34□□□□□ -0.75
GPN1-206ENST00000461249 BCL2L12Q9HB09 334 aa10.34□□□□□ -0.75
GPN1-206ENST00000461249 CASZ1Q86V15 1759 aa10.34□□□□□ -0.75
GPN1-206ENST00000461249 ERVV-1B6SEH8 477 aa10.33□□□□□ -0.76
GPN1-206ENST00000461249 ANKRD13DQ6ZTN6 518 aa10.33□□□□□ -0.76
GPN1-206ENST00000461249 NLGN1Q8N2Q7 840 aa10.33□□□□□ -0.76
GPN1-206ENST00000461249 MRPL50Q8N5N7 158 aaKnown RBP10.33□□□□□ -0.76
GPN1-206ENST00000461249 SSH1Q8WYL5 1049 aa10.33□□□□□ -0.76
GPN1-206ENST00000461249 ZBTB3Q9H5J0 574 aa10.33□□□□□ -0.76
GPN1-206ENST00000461249 C4AP0C0L4 1744 aa10.33□□□□□ -0.76
GPN1-206ENST00000461249 MAP3K15Q6ZN16 1313 aa10.33□□□□□ -0.76
GPN1-206ENST00000461249 CACNA1FO60840 1977 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms