RNA–Protein interactions for RNA: ENST00000461214.1

COL5A3-202, Transcript of collagen type V alpha 3 chain, humanhuman

TSL 3

Gene COL5A3, Length 828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-202ENST00000461214 JMYQ8N9B5 988 aa18.47■□□□□ 0.55
COL5A3-202ENST00000461214 AK7Q96M32 723 aa18.47■□□□□ 0.55
COL5A3-202ENST00000461214 EIF2S2P20042 333 aaKnown RBP18.46■□□□□ 0.55
COL5A3-202ENST00000461214 AMIGO3Q86WK7 504 aa18.46■□□□□ 0.55
COL5A3-202ENST00000461214 DDX21Q9NR30 783 aaKnown RBP eCLIP18.46■□□□□ 0.55
COL5A3-202ENST00000461214 LAMB2P55268 1798 aa18.45■□□□□ 0.54
COL5A3-202ENST00000461214 COL15A1P39059 1388 aa18.45■□□□□ 0.54
COL5A3-202ENST00000461214 ARHGAP27Q6ZUM4 889 aa18.45■□□□□ 0.54
COL5A3-202ENST00000461214 CHPF2Q9P2E5 772 aa18.45■□□□□ 0.54
COL5A3-202ENST00000461214 BCS1LQ9Y276 419 aa18.45■□□□□ 0.54
COL5A3-202ENST00000461214 KIF16BQ96L93 1317 aa18.45■□□□□ 0.54
COL5A3-202ENST00000461214 PXDNLA1KZ92 1463 aa18.45■□□□□ 0.54
COL5A3-202ENST00000461214 IL6STP40189 918 aaPredicted RBP18.44■□□□□ 0.54
COL5A3-202ENST00000461214 RARSP54136 660 aaKnown RBP18.44■□□□□ 0.54
COL5A3-202ENST00000461214 BRPF1P55201 1214 aaPredicted RBP18.44■□□□□ 0.54
COL5A3-202ENST00000461214 RBM46Q8TBY0 533 aaKnown RBP18.44■□□□□ 0.54
COL5A3-202ENST00000461214 HYPKQ9NX55 129 aa18.44■□□□□ 0.54
COL5A3-202ENST00000461214 ZBTB1Q9Y2K1 713 aa18.44■□□□□ 0.54
COL5A3-202ENST00000461214 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.43■□□□□ 0.54
COL5A3-202ENST00000461214 CENPBP07199 599 aaPredicted RBP18.43■□□□□ 0.54
COL5A3-202ENST00000461214 INTS5Q6P9B9 1019 aaKnown RBP18.43■□□□□ 0.54
COL5A3-202ENST00000461214 SMC4Q9NTJ3 1288 aa18.43■□□□□ 0.54
COL5A3-202ENST00000461214 RCAN3Q9UKA8 241 aa18.43■□□□□ 0.54
COL5A3-202ENST00000461214 MYH3P11055 1940 aa18.43■□□□□ 0.54
COL5A3-202ENST00000461214 A1BGP04217 495 aa18.42■□□□□ 0.54
COL5A3-202ENST00000461214 ADRA2BP18089 450 aa18.42■□□□□ 0.54
COL5A3-202ENST00000461214 PDIA6Q15084 440 aa18.42■□□□□ 0.54
COL5A3-202ENST00000461214 SSH1Q8WYL5 1049 aa18.42■□□□□ 0.54
COL5A3-202ENST00000461214 NBPF26B4DH59 902 aa18.41■□□□□ 0.54
COL5A3-202ENST00000461214 GNPATO15228 680 aa18.41■□□□□ 0.54
COL5A3-202ENST00000461214 RPS6KA4O75676 772 aa18.41■□□□□ 0.54
COL5A3-202ENST00000461214 NBPF10Q6P3W6 841 aaKnown RBP18.41■□□□□ 0.54
COL5A3-202ENST00000461214 LRP10Q7Z4F1 713 aa18.41■□□□□ 0.54
COL5A3-202ENST00000461214 NBPF15Q8N660 670 aa18.41■□□□□ 0.54
COL5A3-202ENST00000461214 NECTIN2Q92692 538 aa18.41■□□□□ 0.54
COL5A3-202ENST00000461214 SSFA2P28290 1259 aa18.4■□□□□ 0.54
COL5A3-202ENST00000461214 EIF5P55010 431 aaKnown RBP18.4■□□□□ 0.54
COL5A3-202ENST00000461214 RTCBQ9Y3I0 505 aaKnown RBP18.4■□□□□ 0.54
COL5A3-202ENST00000461214 PTPRCP08575 1304 aa18.4■□□□□ 0.54
COL5A3-202ENST00000461214 A0A0G2JLW4 131 aa18.39■□□□□ 0.53
COL5A3-202ENST00000461214 SLC4A2P04920 1241 aa18.39■□□□□ 0.53
COL5A3-202ENST00000461214 CANXP27824 592 aaKnown RBP18.39■□□□□ 0.53
COL5A3-202ENST00000461214 PROSER3Q2NL68 480 aa18.39■□□□□ 0.53
COL5A3-202ENST00000461214 NPM2Q86SE8 214 aaKnown RBP18.39■□□□□ 0.53
COL5A3-202ENST00000461214 MRPL50Q8N5N7 158 aaKnown RBP18.39■□□□□ 0.53
COL5A3-202ENST00000461214 NRXN2Q9P2S2 1712 aa18.38■□□□□ 0.53
COL5A3-202ENST00000461214 A0A087WZG4 1122 aa18.38■□□□□ 0.53
COL5A3-202ENST00000461214 RGL2O15211 777 aa18.38■□□□□ 0.53
COL5A3-202ENST00000461214 MYL6BP14649 208 aa18.38■□□□□ 0.53
COL5A3-202ENST00000461214 FSTL1Q12841 308 aa18.38■□□□□ 0.53
COL5A3-202ENST00000461214 BCL2L13Q9BXK5 485 aa18.38■□□□□ 0.53
COL5A3-202ENST00000461214 HSPA1AP0DMV8 641 aaKnown RBP18.37■□□□□ 0.53
COL5A3-202ENST00000461214 HSPA1BP0DMV9 641 aaKnown RBP18.37■□□□□ 0.53
COL5A3-202ENST00000461214 FLIIQ13045 1269 aa18.37■□□□□ 0.53
COL5A3-202ENST00000461214 C9orf131Q5VYM1 1079 aa18.37■□□□□ 0.53
COL5A3-202ENST00000461214 TCERG1O14776 1098 aaKnown RBP18.36■□□□□ 0.53
COL5A3-202ENST00000461214 DDX58O95786 925 aaKnown RBP18.36■□□□□ 0.53
COL5A3-202ENST00000461214 ANXA1P04083 346 aa18.36■□□□□ 0.53
COL5A3-202ENST00000461214 MMP10P09238 476 aa18.36■□□□□ 0.53
COL5A3-202ENST00000461214 PIP4K2AP48426 406 aaPredicted RBP18.36■□□□□ 0.53
COL5A3-202ENST00000461214 ARHGAP45Q92619 1136 aa18.36■□□□□ 0.53
COL5A3-202ENST00000461214 RRAGCQ9HB90 399 aa18.36■□□□□ 0.53
COL5A3-202ENST00000461214 KIF6Q6ZMV9 814 aa18.35■□□□□ 0.53
COL5A3-202ENST00000461214 PHAXQ9H814 394 aaKnown RBP18.35■□□□□ 0.53
COL5A3-202ENST00000461214 ZNF330Q9Y3S2 320 aaPredicted RBP18.35■□□□□ 0.53
COL5A3-202ENST00000461214 DDX60Q8IY21 1712 aaKnown RBP18.35■□□□□ 0.53
COL5A3-202ENST00000461214 MAP3K15Q6ZN16 1313 aa18.34■□□□□ 0.53
COL5A3-202ENST00000461214 IPO8O15397 1037 aaKnown RBP18.34■□□□□ 0.53
COL5A3-202ENST00000461214 BCAR3O75815 825 aa18.34■□□□□ 0.53
COL5A3-202ENST00000461214 XAGE3Q8WTP9 111 aa18.34■□□□□ 0.53
COL5A3-202ENST00000461214 USP42Q9H9J4 1324 aaKnown RBP18.33■□□□□ 0.53
COL5A3-202ENST00000461214 FKBP5Q13451 457 aaPredicted RBP18.33■□□□□ 0.52
COL5A3-202ENST00000461214 COPS6Q7L5N1 327 aa18.33■□□□□ 0.52
COL5A3-202ENST00000461214 G2E3Q7L622 706 aa18.33■□□□□ 0.52
COL5A3-202ENST00000461214 DZIP3Q86Y13 1208 aaKnown RBP18.33■□□□□ 0.52
COL5A3-202ENST00000461214 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.33■□□□□ 0.52
COL5A3-202ENST00000461214 PLBD2Q8NHP8 589 aa18.33■□□□□ 0.52
COL5A3-202ENST00000461214 KIF13BQ9NQT8 1826 aa18.33■□□□□ 0.52
COL5A3-202ENST00000461214 KDM2BQ8NHM5 1336 aa18.32■□□□□ 0.52
COL5A3-202ENST00000461214 ERVV-1B6SEH8 477 aa18.32■□□□□ 0.52
COL5A3-202ENST00000461214 DPEP1P16444 411 aa18.32■□□□□ 0.52
COL5A3-202ENST00000461214 TGFB2P61812 414 aa18.32■□□□□ 0.52
COL5A3-202ENST00000461214 TRAPPC3LQ5T215 181 aa18.32■□□□□ 0.52
COL5A3-202ENST00000461214 API5Q9BZZ5 524 aaKnown RBP18.32■□□□□ 0.52
COL5A3-202ENST00000461214 NARFQ9UHQ1 456 aa18.32■□□□□ 0.52
COL5A3-202ENST00000461214 IBTKQ9P2D0 1353 aaPredicted RBP18.31■□□□□ 0.52
COL5A3-202ENST00000461214 RNF123Q5XPI4 1314 aa18.31■□□□□ 0.52
COL5A3-202ENST00000461214 ZKSCAN2Q63HK3 967 aa18.31■□□□□ 0.52
COL5A3-202ENST00000461214 ZNF652Q9Y2D9 606 aa18.31■□□□□ 0.52
COL5A3-202ENST00000461214 ABCC4O15439 1325 aa18.3■□□□□ 0.52
COL5A3-202ENST00000461214 SLC34A2O95436 690 aa18.3■□□□□ 0.52
COL5A3-202ENST00000461214 RFC4P35249 363 aa18.3■□□□□ 0.52
COL5A3-202ENST00000461214 AIMP1Q12904 312 aaKnown RBP18.3■□□□□ 0.52
COL5A3-202ENST00000461214 KSR2Q6VAB6 950 aa18.3■□□□□ 0.52
COL5A3-202ENST00000461214 ATF7IPQ6VMQ6 1270 aa18.3■□□□□ 0.52
COL5A3-202ENST00000461214 TTLL7Q6ZT98 887 aa18.3■□□□□ 0.52
COL5A3-202ENST00000461214 ANKRD13DQ6ZTN6 518 aa18.3■□□□□ 0.52
COL5A3-202ENST00000461214 SMC1BQ8NDV3 1235 aa18.3■□□□□ 0.52
COL5A3-202ENST00000461214 ARHGEF1Q92888 912 aaKnown RBP18.3■□□□□ 0.52
COL5A3-202ENST00000461214 RNF181Q9P0P0 153 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms