RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 CNBD1Q8NA66 436 aa30.05■■■□□ 2.4
CBX3-204ENST00000456948 MAP3K15Q6ZN16 1313 aa30.04■■■□□ 2.4
CBX3-204ENST00000456948 ST5P78524 1137 aa30.04■■■□□ 2.4
CBX3-204ENST00000456948 WWC1Q8IX03 1113 aa30.04■■■□□ 2.4
CBX3-204ENST00000456948 NIP7Q9Y221 180 aaKnown RBP eCLIP30.04■■■□□ 2.4
CBX3-204ENST00000456948 BCS1LQ9Y276 419 aa30.04■■■□□ 2.4
CBX3-204ENST00000456948 N4BP2Q86UW6 1770 aaPredicted RBP30.04■■■□□ 2.4
CBX3-204ENST00000456948 PDE6BP35913 854 aa30.03■■■□□ 2.4
CBX3-204ENST00000456948 HDGFL1Q5TGJ6 251 aa30.03■■■□□ 2.4
CBX3-204ENST00000456948 DUSP27Q5VZP5 1158 aa30.03■■■□□ 2.4
CBX3-204ENST00000456948 TPTE2Q6XPS3 522 aa30.03■■■□□ 2.4
CBX3-204ENST00000456948 NBPF5PQ86XG9 351 aaPredicted RBP30.03■■■□□ 2.4
CBX3-204ENST00000456948 AFDNP55196 1824 aaKnown RBP30.02■■■□□ 2.4
CBX3-204ENST00000456948 H0YIN7 160 aa30.02■■■□□ 2.4
CBX3-204ENST00000456948 NECTIN2Q92692 538 aa30.02■■■□□ 2.4
CBX3-204ENST00000456948 BRIP1Q9BX63 1249 aa30.02■■■□□ 2.4
CBX3-204ENST00000456948 DDX21Q9NR30 783 aaKnown RBP eCLIP30.02■■■□□ 2.4
CBX3-204ENST00000456948 BCORQ6W2J9 1755 aa30.01■■■□□ 2.39
CBX3-204ENST00000456948 DALRD3Q5D0E6 543 aaKnown RBP30.01■■■□□ 2.39
CBX3-204ENST00000456948 KRT24Q2M2I5 525 aa30■■■□□ 2.39
CBX3-204ENST00000456948 DBF4Q9UBU7 674 aaPredicted RBP30■■■□□ 2.39
CBX3-204ENST00000456948 IL16Q14005 1332 aa29.99■■■□□ 2.39
CBX3-204ENST00000456948 GTF2E1P29083 439 aaPredicted RBP29.99■■■□□ 2.39
CBX3-204ENST00000456948 PRR5LQ6MZQ0 368 aa29.99■■■□□ 2.39
CBX3-204ENST00000456948 TTLL7Q6ZT98 887 aa29.99■■■□□ 2.39
CBX3-204ENST00000456948 NRXN2Q9P2S2 1712 aa29.99■■■□□ 2.39
CBX3-204ENST00000456948 PDIA6Q15084 440 aa29.98■■■□□ 2.39
CBX3-204ENST00000456948 HLFQ16534 295 aa29.98■■■□□ 2.39
CBX3-204ENST00000456948 C2CD5Q86YS7 1000 aa29.98■■■□□ 2.39
CBX3-204ENST00000456948 NYXQ9GZU5 481 aa29.98■■■□□ 2.39
CBX3-204ENST00000456948 ZBTB3Q9H5J0 574 aa29.98■■■□□ 2.39
CBX3-204ENST00000456948 KCNA3P22001 575 aa29.97■■■□□ 2.39
CBX3-204ENST00000456948 CHRNA5P30532 468 aa29.97■■■□□ 2.39
CBX3-204ENST00000456948 WDR63Q8IWG1 891 aa29.97■■■□□ 2.39
CBX3-204ENST00000456948 KIAA1551Q9HCM1 1747 aa29.96■■■□□ 2.39
CBX3-204ENST00000456948 HYPKQ9NX55 129 aa29.96■■■□□ 2.39
CBX3-204ENST00000456948 SALL2Q9Y467 1007 aaPredicted RBP29.96■■■□□ 2.39
CBX3-204ENST00000456948 HSP90AB3PQ58FF7 597 aa29.95■■■□□ 2.39
CBX3-204ENST00000456948 GIGYF2Q6Y7W6 1299 aaKnown RBP29.95■■■□□ 2.39
CBX3-204ENST00000456948 COPS6Q7L5N1 327 aa29.95■■■□□ 2.39
CBX3-204ENST00000456948 CHPF2Q9P2E5 772 aa29.95■■■□□ 2.39
CBX3-204ENST00000456948 SENP3-EIF4A1A0A087X0R7 540 aa29.94■■■□□ 2.38
CBX3-204ENST00000456948 AIMP1Q12904 312 aaKnown RBP29.94■■■□□ 2.38
CBX3-204ENST00000456948 CCER2I3L3R5 266 aa29.93■■■□□ 2.38
CBX3-204ENST00000456948 ELL2O00472 640 aaPredicted RBP29.93■■■□□ 2.38
CBX3-204ENST00000456948 ANXA1P04083 346 aa29.93■■■□□ 2.38
CBX3-204ENST00000456948 PROSER3Q2NL68 480 aa29.93■■■□□ 2.38
CBX3-204ENST00000456948 TTLL6Q8N841 843 aa29.93■■■□□ 2.38
CBX3-204ENST00000456948 XAGE3Q8WTP9 111 aa29.93■■■□□ 2.38
CBX3-204ENST00000456948 ARHGAP27Q6ZUM4 889 aa29.92■■■□□ 2.38
CBX3-204ENST00000456948 ATP10DQ9P241 1426 aa29.91■■■□□ 2.38
CBX3-204ENST00000456948 FAM177BA6PVY3 158 aa29.91■■■□□ 2.38
CBX3-204ENST00000456948 PARP10Q53GL7 1025 aa29.91■■■□□ 2.38
CBX3-204ENST00000456948 CCDC30Q5VVM6 783 aa29.91■■■□□ 2.38
CBX3-204ENST00000456948 LRP10Q7Z4F1 713 aa29.91■■■□□ 2.38
CBX3-204ENST00000456948 PPP1R42Q7Z4L9 355 aa29.91■■■□□ 2.38
CBX3-204ENST00000456948 NUP98P52948 1817 aa29.9■■■□□ 2.38
CBX3-204ENST00000456948 CCDC24Q8N4L8 307 aa29.9■■■□□ 2.38
CBX3-204ENST00000456948 ZNF622Q969S3 477 aaKnown RBP eCLIP29.9■■■□□ 2.384e-21■□□□□ 8.5
CBX3-204ENST00000456948 GPTP24298 496 aa29.89■■■□□ 2.38
CBX3-204ENST00000456948 C8orf58Q8NAV2 365 aa29.89■■■□□ 2.38
CBX3-204ENST00000456948 TSR2Q969E8 191 aaKnown RBP29.89■■■□□ 2.38
CBX3-204ENST00000456948 ZNF34Q8IZ26 560 aa29.88■■■□□ 2.37
CBX3-204ENST00000456948 ANKRD13DQ6ZTN6 518 aa29.87■■■□□ 2.37
CBX3-204ENST00000456948 CNKSR1Q969H4 720 aa29.87■■■□□ 2.37
CBX3-204ENST00000456948 BRCA1P38398 1863 aaKnown RBP29.87■■■□□ 2.37
CBX3-204ENST00000456948 GOLGA2Q08379 1002 aa29.86■■■□□ 2.37
CBX3-204ENST00000456948 PLBD2Q8NHP8 589 aa29.86■■■□□ 2.37
CBX3-204ENST00000456948 MASTLQ96GX5 879 aa29.86■■■□□ 2.37
CBX3-204ENST00000456948 STK31Q9BXU1 1019 aa29.86■■■□□ 2.37
CBX3-204ENST00000456948 MYH16Q9H6N6 1097 aa29.86■■■□□ 2.37
CBX3-204ENST00000456948 STYK1Q6J9G0 422 aa29.85■■■□□ 2.37
CBX3-204ENST00000456948 TCIRG1Q13488 830 aa29.84■■■□□ 2.37
CBX3-204ENST00000456948 DIEXFQ68CQ4 756 aaKnown RBP29.84■■■□□ 2.37
CBX3-204ENST00000456948 IBTKQ9P2D0 1353 aaPredicted RBP29.84■■■□□ 2.37
CBX3-204ENST00000456948 ARFGEF1Q9Y6D6 1849 aa29.83■■■□□ 2.37
CBX3-204ENST00000456948 SRGNP10124 158 aa29.83■■■□□ 2.37
CBX3-204ENST00000456948 TWISTNBQ3B726 338 aaPredicted RBP29.83■■■□□ 2.37
CBX3-204ENST00000456948 ZNF526Q8TF50 670 aaPredicted RBP29.83■■■□□ 2.37
CBX3-204ENST00000456948 UTP14AQ9BVJ6 771 aaKnown RBP29.83■■■□□ 2.37
CBX3-204ENST00000456948 DDX58O95786 925 aaKnown RBP29.82■■■□□ 2.36
CBX3-204ENST00000456948 NPR1P16066 1061 aa29.82■■■□□ 2.36
CBX3-204ENST00000456948 SUSD4Q5VX71 490 aa29.82■■■□□ 2.36
CBX3-204ENST00000456948 RNF123Q5XPI4 1314 aa29.81■■■□□ 2.36
CBX3-204ENST00000456948 RIC3Q7Z5B4 369 aa29.81■■■□□ 2.36
CBX3-204ENST00000456948 UBN2Q6ZU65 1347 aa29.8■■■□□ 2.36
CBX3-204ENST00000456948 FANCIQ9NVI1 1328 aa29.8■■■□□ 2.36
CBX3-204ENST00000456948 TSPYL6Q8N831 410 aa29.8■■■□□ 2.36
CBX3-204ENST00000456948 ANKRD31Q8N7Z5 1873 aa29.8■■■□□ 2.36
CBX3-204ENST00000456948 KLRG2A4D1S0 409 aaPredicted RBP29.79■■■□□ 2.36
CBX3-204ENST00000456948 ALDH1B1P30837 517 aa29.79■■■□□ 2.36
CBX3-204ENST00000456948 ERFEQ4G0M1 354 aa29.79■■■□□ 2.36
CBX3-204ENST00000456948 SOGA3Q5TF21 947 aa29.79■■■□□ 2.36
CBX3-204ENST00000456948 NUTM1Q86Y26 1132 aa29.79■■■□□ 2.36
CBX3-204ENST00000456948 GPBP1L1Q9HC44 474 aaPredicted RBP29.79■■■□□ 2.36
CBX3-204ENST00000456948 DLEC1Q9Y238 1755 aa29.79■■■□□ 2.36
CBX3-204ENST00000456948 ADCY9O60503 1353 aa29.77■■■□□ 2.36
CBX3-204ENST00000456948 C1QTNF8P60827 252 aa29.77■■■□□ 2.36
CBX3-204ENST00000456948 NTSR2O95665 410 aa29.76■■■□□ 2.35
CBX3-204ENST00000456948 NLRP10Q86W26 655 aa29.76■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms