RNA–Protein interactions for RNA: ENST00000455659.1

COMMD1-205, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-205ENST00000455659 ARFGEF1Q9Y6D6 1849 aa9.16□□□□□ -0.94
COMMD1-205ENST00000455659 POLRMTO00411 1230 aaKnown RBP9.15□□□□□ -0.94
COMMD1-205ENST00000455659 ANXA1P04083 346 aa9.15□□□□□ -0.94
COMMD1-205ENST00000455659 NFIXQ14938 502 aa9.15□□□□□ -0.94
COMMD1-205ENST00000455659 PROSER3Q2NL68 480 aa9.15□□□□□ -0.94
COMMD1-205ENST00000455659 DUSP27Q5VZP5 1158 aa9.15□□□□□ -0.94
COMMD1-205ENST00000455659 BICDL1Q6ZP65 573 aa9.15□□□□□ -0.94
COMMD1-205ENST00000455659 NLGN2Q8NFZ4 835 aa9.15□□□□□ -0.94
COMMD1-205ENST00000455659 SYT17Q9BSW7 474 aa9.15□□□□□ -0.94
COMMD1-205ENST00000455659 BCL2L12Q9HB09 334 aa9.15□□□□□ -0.94
COMMD1-205ENST00000455659 CHPF2Q9P2E5 772 aa9.15□□□□□ -0.94
COMMD1-205ENST00000455659 MAP3K15Q6ZN16 1313 aa9.14□□□□□ -0.95
COMMD1-205ENST00000455659 ZNF521Q96K83 1311 aa9.14□□□□□ -0.95
COMMD1-205ENST00000455659 TBC1D9BQ66K14 1250 aa9.14□□□□□ -0.95
COMMD1-205ENST00000455659 WDR63Q8IWG1 891 aa9.14□□□□□ -0.95
COMMD1-205ENST00000455659 CD2APQ9Y5K6 639 aa9.14□□□□□ -0.95
COMMD1-205ENST00000455659 RGL2O15211 777 aa9.13□□□□□ -0.95
COMMD1-205ENST00000455659 NPHP1O15259 732 aa9.13□□□□□ -0.95
COMMD1-205ENST00000455659 TTLL7Q6ZT98 887 aa9.13□□□□□ -0.95
COMMD1-205ENST00000455659 ZBTB3Q9H5J0 574 aa9.13□□□□□ -0.95
COMMD1-205ENST00000455659 MYH16Q9H6N6 1097 aa9.13□□□□□ -0.95
COMMD1-205ENST00000455659 DDX21Q9NR30 783 aaKnown RBP eCLIP9.13□□□□□ -0.95
COMMD1-205ENST00000455659 IBTKQ9P2D0 1353 aaPredicted RBP9.12□□□□□ -0.95
COMMD1-205ENST00000455659 DDX60Q8IY21 1712 aaKnown RBP9.12□□□□□ -0.95
COMMD1-205ENST00000455659 ELL2O00472 640 aaPredicted RBP9.12□□□□□ -0.95
COMMD1-205ENST00000455659 TWISTNBQ3B726 338 aaPredicted RBP9.12□□□□□ -0.95
COMMD1-205ENST00000455659 LRP10Q7Z4F1 713 aa9.12□□□□□ -0.95
COMMD1-205ENST00000455659 PELP1Q8IZL8 1130 aaKnown RBP9.12□□□□□ -0.95
COMMD1-205ENST00000455659 TSPYL6Q8N831 410 aa9.12□□□□□ -0.95
COMMD1-205ENST00000455659 CNBD1Q8NA66 436 aa9.12□□□□□ -0.95
COMMD1-205ENST00000455659 C8orf58Q8NAV2 365 aa9.12□□□□□ -0.95
COMMD1-205ENST00000455659 DBF4Q9UBU7 674 aaPredicted RBP9.12□□□□□ -0.95
COMMD1-205ENST00000455659 ABCC12Q96J65 1359 aa9.12□□□□□ -0.95
COMMD1-205ENST00000455659 SERPINB2P05120 415 aa9.11□□□□□ -0.95
COMMD1-205ENST00000455659 TM4SF1P30408 202 aa9.11□□□□□ -0.95
COMMD1-205ENST00000455659 GOLGA2Q08379 1002 aa9.11□□□□□ -0.95
COMMD1-205ENST00000455659 AIMP1Q12904 312 aaKnown RBP9.11□□□□□ -0.95
COMMD1-205ENST00000455659 PDIA6Q15084 440 aa9.11□□□□□ -0.95
COMMD1-205ENST00000455659 CLEC4GQ6UXB4 293 aa9.11□□□□□ -0.95
COMMD1-205ENST00000455659 XAGE3Q8WTP9 111 aa9.11□□□□□ -0.95
COMMD1-205ENST00000455659 SETDB2Q96T68 719 aa9.11□□□□□ -0.95
COMMD1-205ENST00000455659 WWC3Q9ULE0 1092 aa9.11□□□□□ -0.95
COMMD1-205ENST00000455659 NIP7Q9Y221 180 aaKnown RBP eCLIP9.11□□□□□ -0.95
COMMD1-205ENST00000455659 MYH3P11055 1940 aa9.11□□□□□ -0.95
COMMD1-205ENST00000455659 UBN2Q6ZU65 1347 aa9.1□□□□□ -0.95
COMMD1-205ENST00000455659 DCAF8L1A6NGE4 600 aa9.1□□□□□ -0.95
COMMD1-205ENST00000455659 ERVV-1B6SEH8 477 aa9.1□□□□□ -0.95
COMMD1-205ENST00000455659 GPTP24298 496 aa9.1□□□□□ -0.95
COMMD1-205ENST00000455659 ST5P78524 1137 aa9.1□□□□□ -0.95
COMMD1-205ENST00000455659 HLFQ16534 295 aa9.1□□□□□ -0.95
COMMD1-205ENST00000455659 CCDC30Q5VVM6 783 aa9.1□□□□□ -0.95
COMMD1-205ENST00000455659 PRR5LQ6MZQ0 368 aa9.1□□□□□ -0.95
COMMD1-205ENST00000455659 COPS6Q7L5N1 327 aa9.1□□□□□ -0.95
COMMD1-205ENST00000455659 NBPF5PQ86XG9 351 aaPredicted RBP9.1□□□□□ -0.95
COMMD1-205ENST00000455659 STK31Q9BXU1 1019 aa9.1□□□□□ -0.95
COMMD1-205ENST00000455659 CHMP4AQ9BY43 222 aa9.1□□□□□ -0.95
COMMD1-205ENST00000455659 SPINK5Q9NQ38 1064 aaPredicted RBP9.1□□□□□ -0.95
COMMD1-205ENST00000455659 HYPKQ9NX55 129 aa9.1□□□□□ -0.95
COMMD1-205ENST00000455659 TIAM2Q8IVF5 1701 aa9.09□□□□□ -0.95
COMMD1-205ENST00000455659 RIC1Q4ADV7 1423 aa9.09□□□□□ -0.95
COMMD1-205ENST00000455659 FAM177BA6PVY3 158 aa9.09□□□□□ -0.95
COMMD1-205ENST00000455659 E9PSI1 815 aa9.09□□□□□ -0.95
COMMD1-205ENST00000455659 EXOSC9Q06265 439 aaKnown RBP9.09□□□□□ -0.95
COMMD1-205ENST00000455659 HSP90AB3PQ58FF7 597 aa9.09□□□□□ -0.95
COMMD1-205ENST00000455659 TCERG1O14776 1098 aaKnown RBP9.08□□□□□ -0.96
COMMD1-205ENST00000455659 DPEP1P16444 411 aa9.08□□□□□ -0.96
COMMD1-205ENST00000455659 TGFB2P61812 414 aa9.08□□□□□ -0.96
COMMD1-205ENST00000455659 HNRNPUQ00839 825 aaKnown RBP eCLIP9.08□□□□□ -0.96
COMMD1-205ENST00000455659 GPR162Q16538 588 aa9.08□□□□□ -0.96
COMMD1-205ENST00000455659 GIGYF2Q6Y7W6 1299 aaKnown RBP9.08□□□□□ -0.96
COMMD1-205ENST00000455659 CCDC24Q8N4L8 307 aa9.08□□□□□ -0.96
COMMD1-205ENST00000455659 NYXQ9GZU5 481 aa9.08□□□□□ -0.96
COMMD1-205ENST00000455659 YBX3P16989 372 aaKnown RBP eCLIP9.07□□□□□ -0.96
COMMD1-205ENST00000455659 CHRNA5P30532 468 aa9.07□□□□□ -0.96
COMMD1-205ENST00000455659 PARP10Q53GL7 1025 aa9.07□□□□□ -0.96
COMMD1-205ENST00000455659 PLBD2Q8NHP8 589 aa9.07□□□□□ -0.96
COMMD1-205ENST00000455659 ADCY9O60503 1353 aa9.07□□□□□ -0.96
COMMD1-205ENST00000455659 SLX4Q8IY92 1834 aa9.07□□□□□ -0.96
COMMD1-205ENST00000455659 SPEF2Q9C093 1822 aa9.07□□□□□ -0.96
COMMD1-205ENST00000455659 RNF123Q5XPI4 1314 aa9.06□□□□□ -0.96
COMMD1-205ENST00000455659 FER1L6Q2WGJ9 1857 aa9.06□□□□□ -0.96
COMMD1-205ENST00000455659 A0A0G2JLW4 131 aa9.06□□□□□ -0.96
COMMD1-205ENST00000455659 NTSR2O95665 410 aa9.06□□□□□ -0.96
COMMD1-205ENST00000455659 DDX58O95786 925 aaKnown RBP9.06□□□□□ -0.96
COMMD1-205ENST00000455659 GTF2E1P29083 439 aaPredicted RBP9.06□□□□□ -0.96
COMMD1-205ENST00000455659 NUTM1Q86Y26 1132 aa9.06□□□□□ -0.96
COMMD1-205ENST00000455659 C2CD5Q86YS7 1000 aa9.06□□□□□ -0.96
COMMD1-205ENST00000455659 PHAXQ9H814 394 aaKnown RBP9.06□□□□□ -0.96
COMMD1-205ENST00000455659 BCS1LQ9Y276 419 aa9.06□□□□□ -0.96
COMMD1-205ENST00000455659 ZBED9Q6R2W3 1325 aa9.05□□□□□ -0.96
COMMD1-205ENST00000455659 LRRC37AA6NMS7 1700 aa9.05□□□□□ -0.96
COMMD1-205ENST00000455659 CCDC88AQ3V6T2 1871 aa9.05□□□□□ -0.96
COMMD1-205ENST00000455659 PDE6BP35913 854 aa9.05□□□□□ -0.96
COMMD1-205ENST00000455659 SLFN5Q08AF3 891 aa9.05□□□□□ -0.96
COMMD1-205ENST00000455659 FLIIQ13045 1269 aa9.05□□□□□ -0.96
COMMD1-205ENST00000455659 FKBP5Q13451 457 aaPredicted RBP9.05□□□□□ -0.96
COMMD1-205ENST00000455659 SUSD4Q5VX71 490 aa9.05□□□□□ -0.96
COMMD1-205ENST00000455659 TPTE2Q6XPS3 522 aa9.05□□□□□ -0.96
COMMD1-205ENST00000455659 ANKRD13DQ6ZTN6 518 aa9.05□□□□□ -0.96
COMMD1-205ENST00000455659 PPP1R42Q7Z4L9 355 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms