RNA–Protein interactions for RNA: ENST00000453056.5

VPS8-213, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 661 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-213ENST00000453056 NECTIN2Q92692 538 aa20.08■□□□□ 0.81
VPS8-213ENST00000453056 SALL2Q9Y467 1007 aaPredicted RBP20.08■□□□□ 0.81
VPS8-213ENST00000453056 CHD4Q14839 1912 aa20.08■□□□□ 0.8
VPS8-213ENST00000453056 KIAA1551Q9HCM1 1747 aa20.07■□□□□ 0.8
VPS8-213ENST00000453056 GOLGB1Q14789 3259 aaKnown RBP20.07■□□□□ 0.8
VPS8-213ENST00000453056 MAP3K15Q6ZN16 1313 aa20.07■□□□□ 0.8
VPS8-213ENST00000453056 ERVV-1B6SEH8 477 aa20.07■□□□□ 0.8
VPS8-213ENST00000453056 WDR63Q8IWG1 891 aa20.07■□□□□ 0.8
VPS8-213ENST00000453056 DDX21Q9NR30 783 aaKnown RBP eCLIP20.07■□□□□ 0.8
VPS8-213ENST00000453056 TTLL7Q6ZT98 887 aa20.05■□□□□ 0.8
VPS8-213ENST00000453056 CNBD1Q8NA66 436 aa20.05■□□□□ 0.8
VPS8-213ENST00000453056 CHPF2Q9P2E5 772 aa20.05■□□□□ 0.8
VPS8-213ENST00000453056 BRCA1P38398 1863 aaKnown RBP20.05■□□□□ 0.8
VPS8-213ENST00000453056 ATP10DQ9P241 1426 aa20.04■□□□□ 0.8
VPS8-213ENST00000453056 GRIN3BO60391 1043 aa20.04■□□□□ 0.8
VPS8-213ENST00000453056 PDIA6Q15084 440 aa20.04■□□□□ 0.8
VPS8-213ENST00000453056 PROSER3Q2NL68 480 aa20.04■□□□□ 0.8
VPS8-213ENST00000453056 TSR2Q969E8 191 aaKnown RBP20.04■□□□□ 0.8
VPS8-213ENST00000453056 DBF4Q9UBU7 674 aaPredicted RBP20.04■□□□□ 0.8
VPS8-213ENST00000453056 NIP7Q9Y221 180 aaKnown RBP eCLIP20.04■□□□□ 0.8
VPS8-213ENST00000453056 ANXA1P04083 346 aa20.03■□□□□ 0.8
VPS8-213ENST00000453056 ST5P78524 1137 aa20.03■□□□□ 0.8
VPS8-213ENST00000453056 NBPF5PQ86XG9 351 aaPredicted RBP20.03■□□□□ 0.8
VPS8-213ENST00000453056 ZBTB3Q9H5J0 574 aa20.03■□□□□ 0.8
VPS8-213ENST00000453056 UTRNP46939 3433 aa20.03■□□□□ 0.8
VPS8-213ENST00000453056 DPEP1P16444 411 aa20.02■□□□□ 0.8
VPS8-213ENST00000453056 LRP10Q7Z4F1 713 aa20.02■□□□□ 0.8
VPS8-213ENST00000453056 HYPKQ9NX55 129 aa20.02■□□□□ 0.8
VPS8-213ENST00000453056 FANCIQ9NVI1 1328 aa20.02■□□□□ 0.79
VPS8-213ENST00000453056 CACNA1FO60840 1977 aa20.01■□□□□ 0.79
VPS8-213ENST00000453056 ANKRD31Q8N7Z5 1873 aa20.01■□□□□ 0.79
VPS8-213ENST00000453056 ANKRD36CQ5JPF3 1778 aa20.01■□□□□ 0.79
VPS8-213ENST00000453056 DLEC1Q9Y238 1755 aa20.01■□□□□ 0.79
VPS8-213ENST00000453056 A0A0G2JLW4 131 aa20.01■□□□□ 0.79
VPS8-213ENST00000453056 ELL2O00472 640 aaPredicted RBP20.01■□□□□ 0.79
VPS8-213ENST00000453056 HLFQ16534 295 aa20.01■□□□□ 0.79
VPS8-213ENST00000453056 PRR5LQ6MZQ0 368 aa20.01■□□□□ 0.79
VPS8-213ENST00000453056 C8orf58Q8NAV2 365 aa20.01■□□□□ 0.79
VPS8-213ENST00000453056 XAGE3Q8WTP9 111 aa20.01■□□□□ 0.79
VPS8-213ENST00000453056 MYH16Q9H6N6 1097 aa20.01■□□□□ 0.79
VPS8-213ENST00000453056 PDZRN3Q9UPQ7 1066 aa20.01■□□□□ 0.79
VPS8-213ENST00000453056 YBX3P16989 372 aaKnown RBP eCLIP20■□□□□ 0.79
VPS8-213ENST00000453056 CCDC30Q5VVM6 783 aa20■□□□□ 0.79
VPS8-213ENST00000453056 COPS6Q7L5N1 327 aa20■□□□□ 0.79
VPS8-213ENST00000453056 ARFGEF1Q9Y6D6 1849 aa19.99■□□□□ 0.79
VPS8-213ENST00000453056 AIMP1Q12904 312 aaKnown RBP19.99■□□□□ 0.79
VPS8-213ENST00000453056 HSP90AB3PQ58FF7 597 aa19.99■□□□□ 0.79
VPS8-213ENST00000453056 GIGYF2Q6Y7W6 1299 aaKnown RBP19.99■□□□□ 0.79
VPS8-213ENST00000453056 BRIP1Q9BX63 1249 aa19.99■□□□□ 0.79
VPS8-213ENST00000453056 NYXQ9GZU5 481 aa19.99■□□□□ 0.79
VPS8-213ENST00000453056 WWC3Q9ULE0 1092 aa19.99■□□□□ 0.79
VPS8-213ENST00000453056 IBTKQ9P2D0 1353 aaPredicted RBP19.98■□□□□ 0.79
VPS8-213ENST00000453056 PDE6BP35913 854 aa19.98■□□□□ 0.79
VPS8-213ENST00000453056 GOLGA2Q08379 1002 aa19.98■□□□□ 0.79
VPS8-213ENST00000453056 TPTE2Q6XPS3 522 aa19.98■□□□□ 0.79
VPS8-213ENST00000453056 PIM2Q9P1W9 311 aa19.98■□□□□ 0.79
VPS8-213ENST00000453056 GTF2E1P29083 439 aaPredicted RBP19.97■□□□□ 0.79
VPS8-213ENST00000453056 CHRNA5P30532 468 aa19.97■□□□□ 0.79
VPS8-213ENST00000453056 TWISTNBQ3B726 338 aaPredicted RBP19.97■□□□□ 0.79
VPS8-213ENST00000453056 PARP10Q53GL7 1025 aa19.97■□□□□ 0.79
VPS8-213ENST00000453056 C2CD5Q86YS7 1000 aa19.97■□□□□ 0.79
VPS8-213ENST00000453056 MIER1Q8N108 512 aa19.97■□□□□ 0.79
VPS8-213ENST00000453056 STK31Q9BXU1 1019 aa19.97■□□□□ 0.79
VPS8-213ENST00000453056 BCS1LQ9Y276 419 aa19.97■□□□□ 0.79
VPS8-213ENST00000453056 H0YIN7 160 aa19.96■□□□□ 0.79
VPS8-213ENST00000453056 GPTP24298 496 aa19.96■□□□□ 0.79
VPS8-213ENST00000453056 DALRD3Q5D0E6 543 aaKnown RBP19.96■□□□□ 0.79
VPS8-213ENST00000453056 TSPYL6Q8N831 410 aa19.96■□□□□ 0.79
VPS8-213ENST00000453056 ZNF521Q96K83 1311 aa19.96■□□□□ 0.79
VPS8-213ENST00000453056 COL11A2P13942 1736 aaPredicted RBP19.96■□□□□ 0.79
VPS8-213ENST00000453056 FAM177BA6PVY3 158 aa19.95■□□□□ 0.78
VPS8-213ENST00000453056 PLBD2Q8NHP8 589 aa19.95■□□□□ 0.78
VPS8-213ENST00000453056 ARFGEF2Q9Y6D5 1785 aa19.95■□□□□ 0.78
VPS8-213ENST00000453056 YY1P25490 414 aa19.94■□□□□ 0.78
VPS8-213ENST00000453056 PPP1R42Q7Z4L9 355 aa19.94■□□□□ 0.78
VPS8-213ENST00000453056 ZNF34Q8IZ26 560 aa19.94■□□□□ 0.78
VPS8-213ENST00000453056 CCDC24Q8N4L8 307 aa19.94■□□□□ 0.78
VPS8-213ENST00000453056 KCNA3P22001 575 aa19.93■□□□□ 0.78
VPS8-213ENST00000453056 ANKRD13DQ6ZTN6 518 aa19.93■□□□□ 0.78
VPS8-213ENST00000453056 UBN2Q6ZU65 1347 aa19.93■□□□□ 0.78
VPS8-213ENST00000453056 E9PSI1 815 aa19.92■□□□□ 0.78
VPS8-213ENST00000453056 DDX58O95786 925 aaKnown RBP19.92■□□□□ 0.78
VPS8-213ENST00000453056 EXOSC9Q06265 439 aaKnown RBP19.92■□□□□ 0.78
VPS8-213ENST00000453056 TTLL6Q8N841 843 aa19.92■□□□□ 0.78
VPS8-213ENST00000453056 RNF123Q5XPI4 1314 aa19.92■□□□□ 0.78
VPS8-213ENST00000453056 CACNA1SQ13698 1873 aa19.91■□□□□ 0.78
VPS8-213ENST00000453056 TCIRG1Q13488 830 aa19.91■□□□□ 0.78
VPS8-213ENST00000453056 UTP14AQ9BVJ6 771 aaKnown RBP19.91■□□□□ 0.78
VPS8-213ENST00000453056 SPINK5Q9NQ38 1064 aaPredicted RBP19.91■□□□□ 0.78
VPS8-213ENST00000453056 RIC1Q4ADV7 1423 aa19.91■□□□□ 0.78
VPS8-213ENST00000453056 SUSD4Q5VX71 490 aa19.9■□□□□ 0.78
VPS8-213ENST00000453056 RIC3Q7Z5B4 369 aa19.9■□□□□ 0.78
VPS8-213ENST00000453056 ZNF622Q969S3 477 aaKnown RBP eCLIP19.9■□□□□ 0.78
VPS8-213ENST00000453056 ABCC12Q96J65 1359 aa19.9■□□□□ 0.78
VPS8-213ENST00000453056 NTSR2O95665 410 aa19.89■□□□□ 0.77
VPS8-213ENST00000453056 STYK1Q6J9G0 422 aa19.89■□□□□ 0.77
VPS8-213ENST00000453056 NUTM1Q86Y26 1132 aa19.89■□□□□ 0.77
VPS8-213ENST00000453056 MASTLQ96GX5 879 aa19.89■□□□□ 0.77
VPS8-213ENST00000453056 TNRC6CQ9HCJ0 1690 aaKnown RBP19.89■□□□□ 0.77
VPS8-213ENST00000453056 NLRP10Q86W26 655 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms