RNA–Protein interactions for RNA: ENST00000449190.5

RFX3-207, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-207ENST00000449190 NPM2Q86SE8 214 aaKnown RBP11.88□□□□□ -0.51
RFX3-207ENST00000449190 CICQ96RK0 1608 aaPredicted RBP11.87□□□□□ -0.51
RFX3-207ENST00000449190 COL5A3P25940 1745 aaPredicted RBP11.87□□□□□ -0.51
RFX3-207ENST00000449190 ZNF853P0CG23 659 aa11.87□□□□□ -0.51
RFX3-207ENST00000449190 EIF4A1P60842 406 aaKnown RBP11.87□□□□□ -0.51
RFX3-207ENST00000449190 TGFB2P61812 414 aa11.87□□□□□ -0.51
RFX3-207ENST00000449190 YTHDC1Q96MU7 727 aaKnown RBP11.87□□□□□ -0.51
RFX3-207ENST00000449190 CHMP4AQ9BY43 222 aa11.87□□□□□ -0.51
RFX3-207ENST00000449190 MBIPQ9NS73 344 aa11.87□□□□□ -0.51
RFX3-207ENST00000449190 FARP1Q9Y4F1 1045 aaPredicted RBP11.87□□□□□ -0.51
RFX3-207ENST00000449190 TJP1Q07157 1748 aa11.86□□□□□ -0.51
RFX3-207ENST00000449190 PRAMEF22A3QJZ6 481 aa11.86□□□□□ -0.51
RFX3-207ENST00000449190 GRIN3BO60391 1043 aa11.86□□□□□ -0.51
RFX3-207ENST00000449190 GIGYF1O75420 1035 aaPredicted RBP11.86□□□□□ -0.51
RFX3-207ENST00000449190 BCL2L12Q9HB09 334 aa11.86□□□□□ -0.51
RFX3-207ENST00000449190 COL15A1P39059 1388 aa11.86□□□□□ -0.51
RFX3-207ENST00000449190 TBC1D2BQ9UPU7 963 aa11.85□□□□□ -0.51
RFX3-207ENST00000449190 ZBED9Q6R2W3 1325 aa11.85□□□□□ -0.51
RFX3-207ENST00000449190 ZNF521Q96K83 1311 aa11.85□□□□□ -0.51
RFX3-207ENST00000449190 SIPA1L3O60292 1781 aaPredicted RBP11.84□□□□□ -0.51
RFX3-207ENST00000449190 VIRMAQ69YN4 1812 aaKnown RBP11.84□□□□□ -0.51
RFX3-207ENST00000449190 POLRMTO00411 1230 aaKnown RBP11.84□□□□□ -0.51
RFX3-207ENST00000449190 YY1P25490 414 aa11.84□□□□□ -0.51
RFX3-207ENST00000449190 DDR1Q08345 913 aa11.84□□□□□ -0.51
RFX3-207ENST00000449190 SLFN5Q08AF3 891 aa11.84□□□□□ -0.51
RFX3-207ENST00000449190 NFIXQ14938 502 aa11.84□□□□□ -0.51
RFX3-207ENST00000449190 PELP1Q8IZL8 1130 aaKnown RBP11.84□□□□□ -0.51
RFX3-207ENST00000449190 TSR2Q969E8 191 aaKnown RBP11.84□□□□□ -0.51
RFX3-207ENST00000449190 ZNF330Q9Y3S2 320 aaPredicted RBP11.84□□□□□ -0.51
RFX3-207ENST00000449190 UBR2Q8IWV8 1755 aa11.84□□□□□ -0.51
RFX3-207ENST00000449190 NBPF26B4DH59 902 aa11.83□□□□□ -0.52
RFX3-207ENST00000449190 RGL2O15211 777 aa11.83□□□□□ -0.52
RFX3-207ENST00000449190 SERPINB2P05120 415 aa11.83□□□□□ -0.52
RFX3-207ENST00000449190 NBPF10Q6P3W6 841 aaKnown RBP11.83□□□□□ -0.52
RFX3-207ENST00000449190 CLEC4GQ6UXB4 293 aa11.83□□□□□ -0.52
RFX3-207ENST00000449190 DZIP3Q86Y13 1208 aaKnown RBP11.83□□□□□ -0.52
RFX3-207ENST00000449190 NBPF15Q8N660 670 aa11.83□□□□□ -0.52
RFX3-207ENST00000449190 SRCAPQ6ZRS2 3230 aa11.83□□□□□ -0.52
RFX3-207ENST00000449190 DLG5Q8TDM6 1919 aa11.82□□□□□ -0.52
RFX3-207ENST00000449190 ELL2O00472 640 aaPredicted RBP11.82□□□□□ -0.52
RFX3-207ENST00000449190 CAMTA2O94983 1202 aa11.82□□□□□ -0.52
RFX3-207ENST00000449190 HOXB7P09629 217 aa11.82□□□□□ -0.52
RFX3-207ENST00000449190 YBX3P16989 372 aaKnown RBP eCLIP11.82□□□□□ -0.52
RFX3-207ENST00000449190 EIF2S2P20042 333 aaKnown RBP11.82□□□□□ -0.52
RFX3-207ENST00000449190 DUSP27Q5VZP5 1158 aa11.82□□□□□ -0.52
RFX3-207ENST00000449190 DCBLD2Q96PD2 775 aa11.82□□□□□ -0.52
RFX3-207ENST00000449190 FANCIQ9NVI1 1328 aa11.82□□□□□ -0.52
RFX3-207ENST00000449190 A0A0G2JLW4 131 aa11.81□□□□□ -0.52
RFX3-207ENST00000449190 DPEP1P16444 411 aa11.81□□□□□ -0.52
RFX3-207ENST00000449190 PIP4K2AP48426 406 aaPredicted RBP11.81□□□□□ -0.52
RFX3-207ENST00000449190 EXOSC9Q06265 439 aaKnown RBP11.81□□□□□ -0.52
RFX3-207ENST00000449190 TBC1D9BQ66K14 1250 aa11.81□□□□□ -0.52
RFX3-207ENST00000449190 BICDL1Q6ZP65 573 aa11.81□□□□□ -0.52
RFX3-207ENST00000449190 CDCA7LQ96GN5 454 aa11.81□□□□□ -0.52
RFX3-207ENST00000449190 TWISTNBQ3B726 338 aaPredicted RBP11.8□□□□□ -0.52
RFX3-207ENST00000449190 C8orf58Q8NAV2 365 aa11.8□□□□□ -0.52
RFX3-207ENST00000449190 SETDB2Q96T68 719 aa11.8□□□□□ -0.52
RFX3-207ENST00000449190 ERBB4Q15303 1308 aa11.8□□□□□ -0.52
RFX3-207ENST00000449190 C10orf71Q711Q0 1435 aa11.79□□□□□ -0.52
RFX3-207ENST00000449190 ERVV-1B6SEH8 477 aa11.79□□□□□ -0.52
RFX3-207ENST00000449190 KCNA3P22001 575 aa11.79□□□□□ -0.52
RFX3-207ENST00000449190 KRT24Q2M2I5 525 aa11.79□□□□□ -0.52
RFX3-207ENST00000449190 HDGFL1Q5TGJ6 251 aa11.79□□□□□ -0.52
RFX3-207ENST00000449190 CCDC30Q5VVM6 783 aa11.79□□□□□ -0.52
RFX3-207ENST00000449190 TRMT2AQ8IZ69 625 aaKnown RBP11.79□□□□□ -0.52
RFX3-207ENST00000449190 PIM2Q9P1W9 311 aa11.79□□□□□ -0.52
RFX3-207ENST00000449190 ZNF652Q9Y2D9 606 aa11.79□□□□□ -0.52
RFX3-207ENST00000449190 NECTIN2Q92692 538 aa11.78□□□□□ -0.52
RFX3-207ENST00000449190 STK31Q9BXU1 1019 aa11.78□□□□□ -0.52
RFX3-207ENST00000449190 PDZRN3Q9UPQ7 1066 aa11.78□□□□□ -0.52
RFX3-207ENST00000449190 C4AP0C0L4 1744 aa11.77□□□□□ -0.52
RFX3-207ENST00000449190 CT47B1P0C2W7 299 aaPredicted RBP11.77□□□□□ -0.53
RFX3-207ENST00000449190 MYL6BP14649 208 aa11.77□□□□□ -0.53
RFX3-207ENST00000449190 PDIA6Q15084 440 aa11.77□□□□□ -0.53
RFX3-207ENST00000449190 TSPYL6Q8N831 410 aa11.77□□□□□ -0.53
RFX3-207ENST00000449190 BRIP1Q9BX63 1249 aa11.77□□□□□ -0.53
RFX3-207ENST00000449190 BCS1LQ9Y276 419 aa11.77□□□□□ -0.53
RFX3-207ENST00000449190 PXDNLA1KZ92 1463 aa11.76□□□□□ -0.53
RFX3-207ENST00000449190 VAMP4O75379 141 aa11.76□□□□□ -0.53
RFX3-207ENST00000449190 CHRNA5P30532 468 aa11.76□□□□□ -0.53
RFX3-207ENST00000449190 PDE6BP35913 854 aa11.76□□□□□ -0.53
RFX3-207ENST00000449190 HLFQ16534 295 aa11.76□□□□□ -0.53
RFX3-207ENST00000449190 PRR5LQ6MZQ0 368 aa11.76□□□□□ -0.53
RFX3-207ENST00000449190 TPTE2Q6XPS3 522 aa11.76□□□□□ -0.53
RFX3-207ENST00000449190 ZNF428Q96B54 188 aa11.76□□□□□ -0.53
RFX3-207ENST00000449190 DBF4Q9UBU7 674 aaPredicted RBP11.76□□□□□ -0.53
RFX3-207ENST00000449190 WWC3Q9ULE0 1092 aa11.76□□□□□ -0.53
RFX3-207ENST00000449190 MAP3K15Q6ZN16 1313 aa11.76□□□□□ -0.53
RFX3-207ENST00000449190 H0YIN7 160 aa11.75□□□□□ -0.53
RFX3-207ENST00000449190 DALRD3Q5D0E6 543 aaKnown RBP11.75□□□□□ -0.53
RFX3-207ENST00000449190 KIF6Q6ZMV9 814 aa11.75□□□□□ -0.53
RFX3-207ENST00000449190 TTLL7Q6ZT98 887 aa11.75□□□□□ -0.53
RFX3-207ENST00000449190 LRP10Q7Z4F1 713 aa11.75□□□□□ -0.53
RFX3-207ENST00000449190 DDX21Q9NR30 783 aaKnown RBP eCLIP11.75□□□□□ -0.53
RFX3-207ENST00000449190 HYPKQ9NX55 129 aa11.75□□□□□ -0.53
RFX3-207ENST00000449190 NIP7Q9Y221 180 aaKnown RBP eCLIP11.75□□□□□ -0.53
RFX3-207ENST00000449190 CARMIL3Q8ND23 1372 aa11.75□□□□□ -0.53
RFX3-207ENST00000449190 KDM3BQ7LBC6 1761 aa11.74□□□□□ -0.53
RFX3-207ENST00000449190 NPHP1O15259 732 aa11.74□□□□□ -0.53
RFX3-207ENST00000449190 ST5P78524 1137 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms