RNA–Protein interactions for RNA: ENST00000447868.5

UFD1-204, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 596 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-204ENST00000447868 HLFQ16534 295 aa32.47■■■□□ 2.79
UFD1-204ENST00000447868 PROSER3Q2NL68 480 aa32.47■■■□□ 2.79
UFD1-204ENST00000447868 KIF6Q6ZMV9 814 aa32.47■■■□□ 2.79
UFD1-204ENST00000447868 DUSP27Q5VZP5 1158 aa32.46■■■□□ 2.79
UFD1-204ENST00000447868 GRIN3BO60391 1043 aa32.44■■■□□ 2.78
UFD1-204ENST00000447868 HOXB7P09629 217 aa32.44■■■□□ 2.78
UFD1-204ENST00000447868 HDGFL1Q5TGJ6 251 aa32.44■■■□□ 2.78
UFD1-204ENST00000447868 ZBTB3Q9H5J0 574 aa32.44■■■□□ 2.78
UFD1-204ENST00000447868 MAP3K15Q6ZN16 1313 aa32.44■■■□□ 2.78
UFD1-204ENST00000447868 NPHP1O15259 732 aa32.43■■■□□ 2.78
UFD1-204ENST00000447868 YY1P25490 414 aa32.43■■■□□ 2.78
UFD1-204ENST00000447868 CHRNA5P30532 468 aa32.43■■■□□ 2.78
UFD1-204ENST00000447868 NCBP3Q53F19 620 aaKnown RBP32.43■■■□□ 2.78
UFD1-204ENST00000447868 CCDC24Q8N4L8 307 aa32.43■■■□□ 2.78
UFD1-204ENST00000447868 NIP7Q9Y221 180 aaKnown RBP eCLIP32.43■■■□□ 2.78
UFD1-204ENST00000447868 ELL2O00472 640 aaPredicted RBP32.42■■■□□ 2.78
UFD1-204ENST00000447868 LRP10Q7Z4F1 713 aa32.42■■■□□ 2.78
UFD1-204ENST00000447868 TSR2Q969E8 191 aaKnown RBP32.42■■■□□ 2.78
UFD1-204ENST00000447868 ERVV-1B6SEH8 477 aa32.41■■■□□ 2.78
UFD1-204ENST00000447868 RGL2O15211 777 aa32.41■■■□□ 2.78
UFD1-204ENST00000447868 KCNA3P22001 575 aa32.41■■■□□ 2.78
UFD1-204ENST00000447868 PRR5LQ6MZQ0 368 aa32.41■■■□□ 2.78
UFD1-204ENST00000447868 CHPF2Q9P2E5 772 aa32.41■■■□□ 2.78
UFD1-204ENST00000447868 NUP98P52948 1817 aa32.41■■■□□ 2.78
UFD1-204ENST00000447868 CHD4Q14839 1912 aa32.4■■■□□ 2.78
UFD1-204ENST00000447868 CNBD1Q8NA66 436 aa32.4■■■□□ 2.78
UFD1-204ENST00000447868 DDX21Q9NR30 783 aaKnown RBP eCLIP32.4■■■□□ 2.78
UFD1-204ENST00000447868 BCS1LQ9Y276 419 aa32.4■■■□□ 2.78
UFD1-204ENST00000447868 AIMP1Q12904 312 aaKnown RBP32.39■■■□□ 2.78
UFD1-204ENST00000447868 NBPF5PQ86XG9 351 aaPredicted RBP32.39■■■□□ 2.78
UFD1-204ENST00000447868 C8orf58Q8NAV2 365 aa32.39■■■□□ 2.78
UFD1-204ENST00000447868 BRCA1P38398 1863 aaKnown RBP32.39■■■□□ 2.78
UFD1-204ENST00000447868 FAM177BA6PVY3 158 aa32.38■■■□□ 2.77
UFD1-204ENST00000447868 PIM2Q9P1W9 311 aa32.38■■■□□ 2.77
UFD1-204ENST00000447868 IL16Q14005 1332 aa32.37■■■□□ 2.77
UFD1-204ENST00000447868 COPS6Q7L5N1 327 aa32.37■■■□□ 2.77
UFD1-204ENST00000447868 XAGE3Q8WTP9 111 aa32.37■■■□□ 2.77
UFD1-204ENST00000447868 ANKRD31Q8N7Z5 1873 aa32.36■■■□□ 2.77
UFD1-204ENST00000447868 ST5P78524 1137 aa32.36■■■□□ 2.77
UFD1-204ENST00000447868 CCER2I3L3R5 266 aa32.35■■■□□ 2.77
UFD1-204ENST00000447868 C2CD5Q86YS7 1000 aa32.35■■■□□ 2.77
UFD1-204ENST00000447868 DBF4Q9UBU7 674 aaPredicted RBP32.35■■■□□ 2.77
UFD1-204ENST00000447868 GPTP24298 496 aa32.34■■■□□ 2.77
UFD1-204ENST00000447868 DIEXFQ68CQ4 756 aaKnown RBP32.34■■■□□ 2.77
UFD1-204ENST00000447868 WDR63Q8IWG1 891 aa32.34■■■□□ 2.77
UFD1-204ENST00000447868 BRIP1Q9BX63 1249 aa32.34■■■□□ 2.77
UFD1-204ENST00000447868 DALRD3Q5D0E6 543 aaKnown RBP32.33■■■□□ 2.77
UFD1-204ENST00000447868 GIGYF2Q6Y7W6 1299 aaKnown RBP32.33■■■□□ 2.77
UFD1-204ENST00000447868 TSPYL6Q8N831 410 aa32.33■■■□□ 2.77
UFD1-204ENST00000447868 ATP10DQ9P241 1426 aa32.33■■■□□ 2.77
UFD1-204ENST00000447868 H0YIN7 160 aa32.32■■■□□ 2.76
UFD1-204ENST00000447868 PDE6BP35913 854 aa32.32■■■□□ 2.76
UFD1-204ENST00000447868 TPTE2Q6XPS3 522 aa32.31■■■□□ 2.76
UFD1-204ENST00000447868 DLEC1Q9Y238 1755 aa32.3■■■□□ 2.76
UFD1-204ENST00000447868 HYPKQ9NX55 129 aa32.29■■■□□ 2.76
UFD1-204ENST00000447868 UBN2Q6ZU65 1347 aa32.28■■■□□ 2.76
UFD1-204ENST00000447868 FANCIQ9NVI1 1328 aa32.28■■■□□ 2.76
UFD1-204ENST00000447868 GTF2E1P29083 439 aaPredicted RBP32.28■■■□□ 2.76
UFD1-204ENST00000447868 ZNF34Q8IZ26 560 aa32.28■■■□□ 2.76
UFD1-204ENST00000447868 COL11A2P13942 1736 aaPredicted RBP32.27■■■□□ 2.76
UFD1-204ENST00000447868 ARFGEF1Q9Y6D6 1849 aa32.27■■■□□ 2.76
UFD1-204ENST00000447868 ZNF622Q969S3 477 aaKnown RBP eCLIP32.26■■■□□ 2.754e-19■□□□□ 9.5
UFD1-204ENST00000447868 NYXQ9GZU5 481 aa32.26■■■□□ 2.75
UFD1-204ENST00000447868 TWISTNBQ3B726 338 aaPredicted RBP32.25■■■□□ 2.75
UFD1-204ENST00000447868 CCDC30Q5VVM6 783 aa32.25■■■□□ 2.75
UFD1-204ENST00000447868 SUSD4Q5VX71 490 aa32.25■■■□□ 2.75
UFD1-204ENST00000447868 ARHGAP27Q6ZUM4 889 aa32.25■■■□□ 2.75
UFD1-204ENST00000447868 NUTM1Q86Y26 1132 aa32.25■■■□□ 2.75
UFD1-204ENST00000447868 SPINK5Q9NQ38 1064 aaPredicted RBP32.25■■■□□ 2.75
UFD1-204ENST00000447868 PDZRN3Q9UPQ7 1066 aa32.25■■■□□ 2.75
UFD1-204ENST00000447868 TTLL6Q8N841 843 aa32.24■■■□□ 2.75
UFD1-204ENST00000447868 ANKRD36CQ5JPF3 1778 aa32.23■■■□□ 2.75
UFD1-204ENST00000447868 PLBD2Q8NHP8 589 aa32.23■■■□□ 2.75
UFD1-204ENST00000447868 CHMP4AQ9BY43 222 aa32.23■■■□□ 2.75
UFD1-204ENST00000447868 PHAXQ9H814 394 aaKnown RBP32.23■■■□□ 2.75
UFD1-204ENST00000447868 ERFEQ4G0M1 354 aa32.22■■■□□ 2.75
UFD1-204ENST00000447868 HSP90AB3PQ58FF7 597 aa32.22■■■□□ 2.75
UFD1-204ENST00000447868 ANKRD13DQ6ZTN6 518 aa32.22■■■□□ 2.75
UFD1-204ENST00000447868 MIER1Q8N108 512 aa32.22■■■□□ 2.75
UFD1-204ENST00000447868 TCERG1O14776 1098 aaKnown RBP32.21■■■□□ 2.75
UFD1-204ENST00000447868 GOLGA2Q08379 1002 aa32.21■■■□□ 2.75
UFD1-204ENST00000447868 PARP10Q53GL7 1025 aa32.21■■■□□ 2.75
UFD1-204ENST00000447868 ABCC12Q96J65 1359 aa32.2■■■□□ 2.75
UFD1-204ENST00000447868 TCIRG1Q13488 830 aa32.2■■■□□ 2.75
UFD1-204ENST00000447868 PPP1R42Q7Z4L9 355 aa32.2■■■□□ 2.75
UFD1-204ENST00000447868 IBTKQ9P2D0 1353 aaPredicted RBP32.19■■■□□ 2.74
UFD1-204ENST00000447868 NTSR2O95665 410 aa32.19■■■□□ 2.74
UFD1-204ENST00000447868 SRGNP10124 158 aa32.19■■■□□ 2.74
UFD1-204ENST00000447868 EXOSC9Q06265 439 aaKnown RBP32.19■■■□□ 2.74
UFD1-204ENST00000447868 MYH16Q9H6N6 1097 aa32.19■■■□□ 2.74
UFD1-204ENST00000447868 MASTLQ96GX5 879 aa32.18■■■□□ 2.74
UFD1-204ENST00000447868 ZNF521Q96K83 1311 aa32.18■■■□□ 2.74
UFD1-204ENST00000447868 STYK1Q6J9G0 422 aa32.17■■■□□ 2.74
UFD1-204ENST00000447868 UTP14AQ9BVJ6 771 aaKnown RBP32.17■■■□□ 2.74
UFD1-204ENST00000447868 STK31Q9BXU1 1019 aa32.17■■■□□ 2.74
UFD1-204ENST00000447868 TNRC6CQ9HCJ0 1690 aaKnown RBP32.17■■■□□ 2.74
UFD1-204ENST00000447868 CACNA1SQ13698 1873 aa32.16■■■□□ 2.74
UFD1-204ENST00000447868 RIC3Q7Z5B4 369 aa32.16■■■□□ 2.74
UFD1-204ENST00000447868 NLRP10Q86W26 655 aa32.16■■■□□ 2.74
UFD1-204ENST00000447868 ZNF428Q96B54 188 aa32.16■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms