RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 FAM184BQ9ULE4 1060 aa3.37□□□□□ -1.87
CHD9-203ENST00000447540 TXLNAP40222 546 aa3.37□□□□□ -1.87
CHD9-203ENST00000447540 NOP2P46087 812 aaKnown RBP3.37□□□□□ -1.87
CHD9-203ENST00000447540 NAA25Q14CX7 972 aa3.37□□□□□ -1.87
CHD9-203ENST00000447540 SPATA24Q86W54 205 aa3.37□□□□□ -1.87
CHD9-203ENST00000447540 CEP57L1Q8IYX8 460 aa3.37□□□□□ -1.87
CHD9-203ENST00000447540 MICALL1Q8N3F8 863 aa3.37□□□□□ -1.87
CHD9-203ENST00000447540 LSM14AQ8ND56 463 aaKnown RBP3.37□□□□□ -1.87
CHD9-203ENST00000447540 FAN1Q9Y2M0 1017 aa3.37□□□□□ -1.87
CHD9-203ENST00000447540 TCHHQ07283 1943 aa3.37□□□□□ -1.87
CHD9-203ENST00000447540 ELF1P32519 619 aa3.37□□□□□ -1.87
CHD9-203ENST00000447540 ZNF365Q70YC5 407 aa3.37□□□□□ -1.87
CHD9-203ENST00000447540 GOLGA1Q92805 767 aa3.37□□□□□ -1.87
CHD9-203ENST00000447540 MIS18AQ9NYP9 233 aa3.37□□□□□ -1.87
CHD9-203ENST00000447540 DNAI1Q9UI46 699 aa3.37□□□□□ -1.87
CHD9-203ENST00000447540 NPHP3Q7Z494 1330 aa3.37□□□□□ -1.87
CHD9-203ENST00000447540 CLNS1AP54105 237 aaKnown RBP3.37□□□□□ -1.87
CHD9-203ENST00000447540 SNW1Q13573 536 aaKnown RBP3.37□□□□□ -1.87
CHD9-203ENST00000447540 ZNF483Q8TF39 744 aaPredicted RBP3.37□□□□□ -1.87
CHD9-203ENST00000447540 CFAP45Q9UL16 551 aa3.37□□□□□ -1.87
CHD9-203ENST00000447540 CCDC152Q4G0S7 254 aa3.36□□□□□ -1.87
CHD9-203ENST00000447540 SPECC1LQ69YQ0 1117 aa3.36□□□□□ -1.87
CHD9-203ENST00000447540 RINLQ6ZS11 566 aa3.36□□□□□ -1.87
CHD9-203ENST00000447540 ANKRD23Q86SG2 305 aa3.36□□□□□ -1.87
CHD9-203ENST00000447540 KIF2CQ99661 725 aa3.36□□□□□ -1.87
CHD9-203ENST00000447540 UTP6Q9NYH9 597 aaKnown RBP3.36□□□□□ -1.87
CHD9-203ENST00000447540 FRMD4BQ9Y2L6 1034 aa3.36□□□□□ -1.87
CHD9-203ENST00000447540 SPDYE4A6NLX3 237 aa3.36□□□□□ -1.87
CHD9-203ENST00000447540 FLOT1O75955 427 aa3.36□□□□□ -1.87
CHD9-203ENST00000447540 SMC1AQ14683 1233 aaKnown RBP3.36□□□□□ -1.87
CHD9-203ENST00000447540 CCDC146Q8IYE0 955 aa3.36□□□□□ -1.87
CHD9-203ENST00000447540 RASSF8Q8NHQ8 419 aa3.36□□□□□ -1.87
CHD9-203ENST00000447540 RUBCNQ92622 972 aa3.36□□□□□ -1.87
CHD9-203ENST00000447540 MAPKBP1O60336 1514 aa3.36□□□□□ -1.87
CHD9-203ENST00000447540 G3BP1Q13283 466 aaKnown RBP eCLIP3.36□□□□□ -1.87
CHD9-203ENST00000447540 MAP7Q14244 749 aa3.36□□□□□ -1.87
CHD9-203ENST00000447540 ATL3Q6DD88 541 aa3.36□□□□□ -1.87
CHD9-203ENST00000447540 ZCRB1Q8TBF4 217 aaKnown RBP3.36□□□□□ -1.87
CHD9-203ENST00000447540 NOC3LQ8WTT2 800 aaKnown RBP3.36□□□□□ -1.87
CHD9-203ENST00000447540 CTTNBP2Q8WZ74 1663 aa3.36□□□□□ -1.87
CHD9-203ENST00000447540 SRRM3A6NNA2 597 aaPredicted RBP3.36□□□□□ -1.87
CHD9-203ENST00000447540 C3orf20Q8ND61 904 aa3.36□□□□□ -1.87
CHD9-203ENST00000447540 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.36□□□□□ -1.87
CHD9-203ENST00000447540 BHMT2Q9H2M3 363 aa3.36□□□□□ -1.87
CHD9-203ENST00000447540 LUC7L2Q9Y383 392 aaKnown RBP3.36□□□□□ -1.87
CHD9-203ENST00000447540 CASTP20810 708 aaKnown RBP3.36□□□□□ -1.87
CHD9-203ENST00000447540 CDC25BP30305 580 aa3.36□□□□□ -1.87
CHD9-203ENST00000447540 ABCD1P33897 745 aa3.36□□□□□ -1.87
CHD9-203ENST00000447540 CORO7P57737 925 aa3.36□□□□□ -1.87
CHD9-203ENST00000447540 CKAP4Q07065 602 aaKnown RBP3.36□□□□□ -1.87
CHD9-203ENST00000447540 MEX3CQ5U5Q3 659 aaKnown RBP3.36□□□□□ -1.87
CHD9-203ENST00000447540 JAKMIP1Q96N16 626 aaKnown RBP3.36□□□□□ -1.87
CHD9-203ENST00000447540 GGA2Q9UJY4 613 aa3.36□□□□□ -1.87
CHD9-203ENST00000447540 USP47Q96K76 1375 aa3.36□□□□□ -1.87
CHD9-203ENST00000447540 CYTH3O43739 400 aa3.36□□□□□ -1.87
CHD9-203ENST00000447540 SNUPNO95149 360 aaKnown RBP3.36□□□□□ -1.87
CHD9-203ENST00000447540 TRIM21P19474 475 aaKnown RBP3.36□□□□□ -1.87
CHD9-203ENST00000447540 GIGYF2Q6Y7W6 1299 aaKnown RBP3.36□□□□□ -1.87
CHD9-203ENST00000447540 ARHGAP31Q2M1Z3 1444 aa3.36□□□□□ -1.87
CHD9-203ENST00000447540 PRC1O43663 620 aa3.36□□□□□ -1.87
CHD9-203ENST00000447540 TSR1Q2NL82 804 aaKnown RBP3.36□□□□□ -1.87
CHD9-203ENST00000447540 MAGEC3Q8TD91 643 aa3.36□□□□□ -1.87
CHD9-203ENST00000447540 ZSCAN31Q96LW9 406 aaPredicted RBP3.36□□□□□ -1.87
CHD9-203ENST00000447540 CFAP74Q9C0B2 1584 aa3.36□□□□□ -1.87
CHD9-203ENST00000447540 ARAP3Q8WWN8 1544 aa3.36□□□□□ -1.87
CHD9-203ENST00000447540 SYCE3A1L190 88 aa3.36□□□□□ -1.87
CHD9-203ENST00000447540 LCA5Q86VQ0 697 aa3.36□□□□□ -1.87
CHD9-203ENST00000447540 ANKS4BQ8N8V4 417 aa3.36□□□□□ -1.87
CHD9-203ENST00000447540 IFT74Q96LB3 600 aa3.36□□□□□ -1.87
CHD9-203ENST00000447540 TTC14Q96N46 770 aa3.36□□□□□ -1.87
CHD9-203ENST00000447540 BIVM-ERCC5R4GMW8 1640 aa3.36□□□□□ -1.87
CHD9-203ENST00000447540 VCAM1P19320 739 aa3.36□□□□□ -1.87
CHD9-203ENST00000447540 SLC30A9Q6PML9 568 aa3.36□□□□□ -1.87
CHD9-203ENST00000447540 SYT10Q6XYQ8 523 aa3.36□□□□□ -1.87
CHD9-203ENST00000447540 CARD11Q9BXL7 1154 aa3.36□□□□□ -1.87
CHD9-203ENST00000447540 VIPAS39Q9H9C1 493 aa3.36□□□□□ -1.87
CHD9-203ENST00000447540 NCOA3Q9Y6Q9 1424 aa3.35□□□□□ -1.87
CHD9-203ENST00000447540 PRIM1P49642 420 aaKnown RBP3.35□□□□□ -1.87
CHD9-203ENST00000447540 RIPPLY1Q0D2K3 151 aa3.35□□□□□ -1.87
CHD9-203ENST00000447540 CUL3Q13618 768 aa3.35□□□□□ -1.87
CHD9-203ENST00000447540 ARHGAP29Q52LW3 1261 aa3.35□□□□□ -1.87
CHD9-203ENST00000447540 CERS3Q8IU89 383 aa3.35□□□□□ -1.87
CHD9-203ENST00000447540 HDAC7Q8WUI4 952 aa3.35□□□□□ -1.87
CHD9-203ENST00000447540 HNRNPLLQ8WVV9 542 aaKnown RBP3.35□□□□□ -1.87
CHD9-203ENST00000447540 TRIM7Q9C029 511 aa3.35□□□□□ -1.87
CHD9-203ENST00000447540 PTPRGP23470 1445 aa3.35□□□□□ -1.87
CHD9-203ENST00000447540 ZFYP08048 801 aaPredicted RBP3.35□□□□□ -1.87
CHD9-203ENST00000447540 FERP16591 822 aa3.35□□□□□ -1.87
CHD9-203ENST00000447540 MRPL12P52815 198 aaKnown RBP3.35□□□□□ -1.87
CHD9-203ENST00000447540 CCDC148Q8NFR7 591 aa3.35□□□□□ -1.87
CHD9-203ENST00000447540 TARSL2A2RTX5 802 aaKnown RBP3.35□□□□□ -1.87
CHD9-203ENST00000447540 TMEM232C9JQI7 657 aa3.35□□□□□ -1.87
CHD9-203ENST00000447540 LIN7AO14910 233 aaPredicted RBP3.35□□□□□ -1.87
CHD9-203ENST00000447540 MFN1Q8IWA4 741 aa3.35□□□□□ -1.87
CHD9-203ENST00000447540 MRFAP1L1Q96HT8 127 aa3.35□□□□□ -1.87
CHD9-203ENST00000447540 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.35□□□□□ -1.87
CHD9-203ENST00000447540 CCDC141Q6ZP82 1450 aa3.35□□□□□ -1.87
CHD9-203ENST00000447540 SEPT6Q14141 434 aa3.35□□□□□ -1.87
CHD9-203ENST00000447540 RSPH3Q86UC2 560 aa3.35□□□□□ -1.87
CHD9-203ENST00000447540 ZNF513Q8N8E2 541 aaPredicted RBP3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms