RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 WDR63Q8IWG1 891 aa15.44■□□□□ 0.06
RFC4-208ENST00000447345 POLRMTO00411 1230 aaKnown RBP15.43■□□□□ 0.06
RFC4-208ENST00000447345 HOXB7P09629 217 aa15.43■□□□□ 0.06
RFC4-208ENST00000447345 PDIA6Q15084 440 aa15.43■□□□□ 0.06
RFC4-208ENST00000447345 TSPYL6Q8N831 410 aa15.43■□□□□ 0.06
RFC4-208ENST00000447345 ZBTB3Q9H5J0 574 aa15.43■□□□□ 0.06
RFC4-208ENST00000447345 SPINK5Q9NQ38 1064 aaPredicted RBP15.43■□□□□ 0.06
RFC4-208ENST00000447345 DLEC1Q9Y238 1755 aa15.43■□□□□ 0.06
RFC4-208ENST00000447345 CACNA1FO60840 1977 aa15.43■□□□□ 0.06
RFC4-208ENST00000447345 COL11A2P13942 1736 aaPredicted RBP15.43■□□□□ 0.06
RFC4-208ENST00000447345 AIMP1Q12904 312 aaKnown RBP15.42■□□□□ 0.06
RFC4-208ENST00000447345 WWC3Q9ULE0 1092 aa15.42■□□□□ 0.06
RFC4-208ENST00000447345 ZNF652Q9Y2D9 606 aa15.42■□□□□ 0.06
RFC4-208ENST00000447345 CARMIL3Q8ND23 1372 aa15.41■□□□□ 0.06
RFC4-208ENST00000447345 TM4SF1P30408 202 aa15.41■□□□□ 0.06
RFC4-208ENST00000447345 HLFQ16534 295 aa15.41■□□□□ 0.06
RFC4-208ENST00000447345 PELP1Q8IZL8 1130 aaKnown RBP15.41■□□□□ 0.06
RFC4-208ENST00000447345 CD2APQ9Y5K6 639 aa15.41■□□□□ 0.06
RFC4-208ENST00000447345 MAP3K15Q6ZN16 1313 aa15.41■□□□□ 0.06
RFC4-208ENST00000447345 ZNF521Q96K83 1311 aa15.41■□□□□ 0.06
RFC4-208ENST00000447345 PXDNLA1KZ92 1463 aa15.4■□□□□ 0.06
RFC4-208ENST00000447345 TCERG1O14776 1098 aaKnown RBP15.4■□□□□ 0.06
RFC4-208ENST00000447345 SERPINB2P05120 415 aa15.4■□□□□ 0.06
RFC4-208ENST00000447345 LRP10Q7Z4F1 713 aa15.4■□□□□ 0.06
RFC4-208ENST00000447345 XAGE3Q8WTP9 111 aa15.4■□□□□ 0.06
RFC4-208ENST00000447345 DDX21Q9NR30 783 aaKnown RBP eCLIP15.4■□□□□ 0.06
RFC4-208ENST00000447345 TNRC6CQ9HCJ0 1690 aaKnown RBP15.39■□□□□ 0.05
RFC4-208ENST00000447345 FAM177BA6PVY3 158 aa15.39■□□□□ 0.05
RFC4-208ENST00000447345 EXOSC9Q06265 439 aaKnown RBP15.39■□□□□ 0.05
RFC4-208ENST00000447345 GOLGA2Q08379 1002 aa15.39■□□□□ 0.05
RFC4-208ENST00000447345 TWISTNBQ3B726 338 aaPredicted RBP15.39■□□□□ 0.05
RFC4-208ENST00000447345 COPS6Q7L5N1 327 aa15.39■□□□□ 0.05
RFC4-208ENST00000447345 CCDC24Q8N4L8 307 aa15.39■□□□□ 0.05
RFC4-208ENST00000447345 SETDB2Q96T68 719 aa15.39■□□□□ 0.05
RFC4-208ENST00000447345 MYH16Q9H6N6 1097 aa15.39■□□□□ 0.05
RFC4-208ENST00000447345 DBF4Q9UBU7 674 aaPredicted RBP15.39■□□□□ 0.05
RFC4-208ENST00000447345 NPHP1O15259 732 aa15.38■□□□□ 0.05
RFC4-208ENST00000447345 GPTP24298 496 aa15.38■□□□□ 0.05
RFC4-208ENST00000447345 NIP7Q9Y221 180 aaKnown RBP eCLIP15.38■□□□□ 0.05
RFC4-208ENST00000447345 CHD4Q14839 1912 aa15.37■□□□□ 0.05
RFC4-208ENST00000447345 ATP10DQ9P241 1426 aa15.37■□□□□ 0.05
RFC4-208ENST00000447345 ARFGEF1Q9Y6D6 1849 aa15.37■□□□□ 0.05
RFC4-208ENST00000447345 LAMB2P55268 1798 aa15.36■□□□□ 0.05
RFC4-208ENST00000447345 ERVV-1B6SEH8 477 aa15.36■□□□□ 0.05
RFC4-208ENST00000447345 CCDC30Q5VVM6 783 aa15.36■□□□□ 0.05
RFC4-208ENST00000447345 CLEC4GQ6UXB4 293 aa15.36■□□□□ 0.05
RFC4-208ENST00000447345 CNBD1Q8NA66 436 aa15.36■□□□□ 0.05
RFC4-208ENST00000447345 HYPKQ9NX55 129 aa15.36■□□□□ 0.05
RFC4-208ENST00000447345 A0A0G2JLW4 131 aa15.35■□□□□ 0.05
RFC4-208ENST00000447345 DCAF8L1A6NGE4 600 aa15.35■□□□□ 0.05
RFC4-208ENST00000447345 HNRNPUQ00839 825 aaKnown RBP eCLIP15.35■□□□□ 0.05
RFC4-208ENST00000447345 GPR162Q16538 588 aa15.35■□□□□ 0.05
RFC4-208ENST00000447345 PRR5LQ6MZQ0 368 aa15.35■□□□□ 0.05
RFC4-208ENST00000447345 NBPF5PQ86XG9 351 aaPredicted RBP15.35■□□□□ 0.05
RFC4-208ENST00000447345 ZNF428Q96B54 188 aa15.35■□□□□ 0.05
RFC4-208ENST00000447345 CDCA7LQ96GN5 454 aa15.35■□□□□ 0.05
RFC4-208ENST00000447345 STK31Q9BXU1 1019 aa15.35■□□□□ 0.05
RFC4-208ENST00000447345 PHAXQ9H814 394 aaKnown RBP15.35■□□□□ 0.05
RFC4-208ENST00000447345 UBN2Q6ZU65 1347 aa15.35■□□□□ 0.05
RFC4-208ENST00000447345 GOLGB1Q14789 3259 aaKnown RBP15.35■□□□□ 0.05
RFC4-208ENST00000447345 DPEP1P16444 411 aa15.34■□□□□ 0.05
RFC4-208ENST00000447345 CHRNA5P30532 468 aa15.34■□□□□ 0.05
RFC4-208ENST00000447345 GIGYF2Q6Y7W6 1299 aaKnown RBP15.34■□□□□ 0.05
RFC4-208ENST00000447345 E9PSI1 815 aa15.33■□□□□ 0.04
RFC4-208ENST00000447345 RGL2O15211 777 aa15.33■□□□□ 0.04
RFC4-208ENST00000447345 ST5P78524 1137 aa15.33■□□□□ 0.04
RFC4-208ENST00000447345 DDX60Q8IY21 1712 aaKnown RBP15.33■□□□□ 0.04
RFC4-208ENST00000447345 YBX3P16989 372 aaKnown RBP eCLIP15.32■□□□□ 0.044e-7■■□□□ 12.9
RFC4-208ENST00000447345 TGFB2P61812 414 aa15.32■□□□□ 0.04
RFC4-208ENST00000447345 SLFN5Q08AF3 891 aa15.32■□□□□ 0.04
RFC4-208ENST00000447345 ABCC12Q96J65 1359 aa15.32■□□□□ 0.04
RFC4-208ENST00000447345 VAMP4O75379 141 aa15.31■□□□□ 0.04
RFC4-208ENST00000447345 GTF2E1P29083 439 aaPredicted RBP15.31■□□□□ 0.04
RFC4-208ENST00000447345 ANKRD13DQ6ZTN6 518 aa15.31■□□□□ 0.04
RFC4-208ENST00000447345 G2E3Q7L622 706 aa15.31■□□□□ 0.04
RFC4-208ENST00000447345 RIC3Q7Z5B4 369 aa15.31■□□□□ 0.04
RFC4-208ENST00000447345 NUTM1Q86Y26 1132 aa15.31■□□□□ 0.04
RFC4-208ENST00000447345 ZNF34Q8IZ26 560 aa15.31■□□□□ 0.04
RFC4-208ENST00000447345 PLBD2Q8NHP8 589 aa15.31■□□□□ 0.04
RFC4-208ENST00000447345 CHMP4AQ9BY43 222 aa15.31■□□□□ 0.04
RFC4-208ENST00000447345 SLC4A2P04920 1241 aa15.3■□□□□ 0.04
RFC4-208ENST00000447345 HSP90AB3PQ58FF7 597 aa15.3■□□□□ 0.04
RFC4-208ENST00000447345 SUSD4Q5VX71 490 aa15.3■□□□□ 0.04
RFC4-208ENST00000447345 C2CD5Q86YS7 1000 aa15.3■□□□□ 0.04
RFC4-208ENST00000447345 BCS1LQ9Y276 419 aa15.3■□□□□ 0.04
RFC4-208ENST00000447345 SLX4Q8IY92 1834 aa15.29■□□□□ 0.04
RFC4-208ENST00000447345 IBTKQ9P2D0 1353 aaPredicted RBP15.29■□□□□ 0.04
RFC4-208ENST00000447345 ATP5J2-PTCD1G3V325 749 aa15.29■□□□□ 0.04
RFC4-208ENST00000447345 ERFEQ4G0M1 354 aa15.29■□□□□ 0.04
RFC4-208ENST00000447345 TPTE2Q6XPS3 522 aa15.29■□□□□ 0.04
RFC4-208ENST00000447345 TAF1P21675 1872 aa15.29■□□□□ 0.04
RFC4-208ENST00000447345 MYH3P11055 1940 aa15.28■□□□□ 0.04
RFC4-208ENST00000447345 NTSR2O95665 410 aa15.28■□□□□ 0.04
RFC4-208ENST00000447345 DDX58O95786 925 aaKnown RBP15.28■□□□□ 0.04
RFC4-208ENST00000447345 KCNA3P22001 575 aa15.28■□□□□ 0.04
RFC4-208ENST00000447345 TCIRG1Q13488 830 aa15.28■□□□□ 0.04
RFC4-208ENST00000447345 MYD88Q99836 296 aa15.28■□□□□ 0.04
RFC4-208ENST00000447345 BRIP1Q9BX63 1249 aa15.28■□□□□ 0.04
RFC4-208ENST00000447345 NYXQ9GZU5 481 aa15.28■□□□□ 0.04
RFC4-208ENST00000447345 CCDC88AQ3V6T2 1871 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms